| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,277,500 | T→G | 17.2% | V55G (GTG→GGG) | yhaV → | toxin of the SohB(PrlF)‑YhaV toxin‑antitoxin system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,277,500 | 0 | T | G | 17.2% | 139.8 / 6.2 | 77 | V55G (GTG→GGG) | yhaV | toxin of the SohB(PrlF)‑YhaV toxin‑antitoxin system |
| Reads supporting (aligned to +/- strand): ref base T (14/45); new base G (10/4); total (28/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGT > NC_000913/3277266‑3277736 | attcaaaaAGGAAAGAACTTTGTCGCTGGCATGGACTTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGAtt < 1:73937/239‑1 (MQ=255) ttaaaaaaGGAAAGAACCTTGCCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTCCCAAAAAGGTTTAATGGTTG‑GGCGCTATATGCCCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTg < 1:1132082/233‑1 (MQ=255) aaagaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGACAATTATCAGAGAAAAGCCGCCCCAAAGTTATTGGCGGGTGTCCATAAAAGGAATTAGGAGCata > 1:456766/1‑238 (MQ=255) aagaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAATCCCAAAAATGATTGAGGAGCgtaat > 1:822325/1‑237 (MQ=255) gaaaCTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCCTAAAATGAGTGAGGGGCATATCAc > 1:800621/1‑239 (MQ=255) tgggcgcgGGCGTGGACTTCAAAATTGAGGATTGTATTGGCGTCAAGGAATAAGGGATTTCCCAAAAAGGGTTAAGGTTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGTCGTGTTAGTTGCCGAAGTCGAGATATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCa < 1:527812/235‑1 (MQ=255) cAAAATTGATGATGAGATTGGCGACGACGAATAATGGATTTCCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCAt < 1:801600/238‑1 (MQ=255) tgatgatgaGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCCTAAATGGGTTGAGGAGCATATCACGGTAAATCCATCATCACCGGCATTCCGTCa > 1:107703/1‑239 (MQ=255) tgatgatgaGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGGGATTGAGGGGCATATCACGGTCAATCCATACTCACCCGCATTACCTCa > 1:342468/1‑239 (MQ=255) gatgatgaGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTAATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGA‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAt < 1:1227549/239‑1 (MQ=255) atgaGATTGGCGACGACGAATAATGTATTTACCAAAAGGGGTTAATGGTTG‑GGCGATATATGCTCACCCTTGTTTTCAGGAAA‑CCTGCGACGCTTTAGTGGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAATTTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCa < 1:920991/239‑1 (MQ=255) tgaGATTGGCGACGCAGAATAATGTATTTTCCAAAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTCCGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCa < 1:168664/238‑1 (MQ=255) gtgtttGGCGCCGTAGAATTATTGTTTTCCCAAAAGGGGTTAATGGTGG‑TGCCCTATATGCTACCCCTTGTTACCAGGAAA‑CCTACGACGGTTTAGTTGCCGAAGCCGAGACATTAAAGGA‑AAAAGA‑CCCTGAAAATTATCAAAAAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAg < 2:431266/235‑1 (MQ=255) gagaTTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCACAAAAAGATTTAGGAGCGAAACACGGGTAATACATCATCAACGGCCGTCCGGCAAGGGaaa > 2:888360/1‑238 (MQ=255) tgggcaagaggaAAAATGGATTTTCCAAAAGGGTTTAATGGTTG‑GGGGTTTATTGCCCACTCAGTTTTTCAGGAAA‑ACTACGCCTGTTTAAGTCCCGAATGCGAGACATTAAAGGG‑AAAAGC‑CCCGGAAAATTATCAGAAAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGtt < 2:1186491/229‑1 (MQ=255) tGGCGATGACGAATAATGGTTTTCCCAAAAAGGGTAAATGGTTG‑GCCATTATATGCTCATCCTTGTTTTCAGGAAA‑CCTACGGCGCTTAAGTTGCAGAAGCCGAGACATTAAAGGA‑AAAAGA‑CCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGtt < 1:445113/239‑1 (MQ=255) ggagatatattGTATTTTCCAAAAAGGTTTAAGGGTTGTGGCG‑TATATTC‑CACACCCGTTTTTAAGAAACCCTACGACGTTTTACATGCCGAAGGCGAGACATTAAAGGG‑AAAAGC‑TCCAGAAAATTACCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGct < 2:1241981/232‑1 (MQ=255) tttCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGGGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCCAGTCGCTAGGCGC‑TGGGG‑AAAATAAAGa > 1:106146/1‑239 (MQ=255) ttCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAATGATTGAGGAGGCAATAAAGGGCCATTCCTACTCACCGGGATTCCCGCAGGGACAGTAGCTAAGCTC‑TGGGC‑AAAATaaaa > 1:858903/1‑236 (MQ=255) tG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCCTAAAGAGATTGCAGAGCATATCACGGGCAATCCCTCATCACCCGCCTTCCGTTCTGGCAAGTCGTTATGCGCATGGGA‑AAAA‑AAAAACATGTCC‑C‑CGGTAAAAATTgg > 1:1170412/1‑239 (MQ=255) tG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGGGCATATCACGGGCCATCCATCATCACCGGCCTTCCGTCATGGCAAGTCGGTAGGGTC‑AGGGA‑AAAATAAAGACTGGTCA‑C‑CGGGAAAAATTgg > 1:1250172/1‑239 (MQ=255) tG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGGCCCTAAAGGGATTTAGGAGCATAACACGGTCAATCCATCATCACCGGCATTCCGTCCTGGCAAGTCGTTAGGCTC‑TGGGG‑AAAATAAAGACAGGGCA‑C‑GGGGAAAAATTgg > 1:718573/1‑239 (MQ=255) g‑ggCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCCTAAAAGGAATGAGGAGCATATCACGGTCAATCCATCATAACCGGCATTCCGCCATGGGAAGACGTTACGCTC‑TGGGG‑AAAAACAAAACTGGGAACC‑GGGAAAAATTTgc > 1:476982/1‑238 (MQ=255) ggCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAATGATTGAGGAGCATATCACGGTCAATCCATTCTCACCGGCAATCCGTCCTGGCAAGTCGTTAGGGCC‑TTGGG‑AAAATAAATACTGGTCC‑CGGGGAAAAATTTGGt > 1:136215/1‑239 (MQ=255) cgcTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGGCCATAAAAGGATTTAGGAGGATTTCACGGTCACTCCTTCATCCCCGGCATTCCGTCATTGGAAGACGTTGGGATC‑TTGGG‑AAAATAAAGACTGGTGC‑C‑AGGTAAAATTTtgtgtt > 1:81048/1‑237 (MQ=255) tatGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTTCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TCGGC‑AAAATAAAAAACGGGAC‑C‑GGGGAAAATTTTGttgtgggct > 1:271225/1‑231 (MQ=255) accccTGTTTTCAGGAAA‑CCTACGAGGCTTTAGTCGCCGAAGCCGGAACATTAAAGGG‑AAAAGG‑TCCTATAAATTAGCGGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGAGTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGt < 1:906502/237‑1 (MQ=255) aTCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGGAGTTCATAAAAGGAGTGTGGGGGCAATCAAGGGTAAACCATCATCACCCGCATTCAGTCATGGAGACACGGTAGGGGC‑TCGGACAAAAAAAAACCGGGGCA‑C‑GGG‑AAAATATTGTGCTGGtgggtaaggg > 2:1060007/1‑230 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTTCATAAAGTGATTGAGGAGCATATCACGGTCAATTCATCATTCACGGCCTTCCGTCCTGGCAACACGTTAGAACC‑TGGGG‑AAAATAAACAATAGTTA‑C‑CGGGAAAATTTGCTGCTGGTCGTTTTca > 2:1020484/1‑236 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCCTAAAGAGGTTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCCTGGCAAACCGTTAGGGTC‑TGGGG‑AAAATAAAAACTGGTCA‑C‑GGGGAAAATTTGTGGCTGGCCGTTATCg > 1:56109/1‑237 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATCAAAGGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAAGCTC‑TGGGA‑AGAATAAAAAATTGTCA‑C‑GGGGAAAAATTTGTGCTGGTCGCTATTGt > 1:227035/1‑238 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAAAGATTGAGGAGCCAAACAACGGCAATCCATCATCACCCGCATTCCCTCCTGGGAAGTCGGTAGGCCC‑TGGGT‑AAAATAAAAAATGGGCA‑C‑GGGGAAAATTTTGTGGTGGTCGTTATctc > 1:1228898/1‑236 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGGCCATAAAATGATTGAGGAGCATATCACGGGCAATCCATCATCACCGGCATTCCGTCATGGCAAATCGTTAGGCTC‑TGGGG‑AAAATAAAAACCGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGGTATCg > 1:428320/1‑237 (MQ=255) tGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGGCCATAAAATGATTGAGGAGCATATTCCGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGGTTGGCTC‑TGGGA‑AAAAAAAAAACTGGGCA‑C‑GGGGAAAAATTGTGCCTGGTCGTTATCGTCtctt > 1:411923/1‑239 (MQ=255) gTTTTCAGGAAA‑ACTGCGACGTGTAAGTGGCCAAAGTGAAAAAATTAAGGGA‑AAAAGC‑ACAGAAAAATTAACAAAAAAAAGCCGCCACAAAGGTATTGGCGGTAGGCCAGAAAGTGATTGAGGAGCATATGACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCtcttc < 2:745652/239‑1 (MQ=255) ttttCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTTAGGGGCATATCACGGGCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCTGTAGGCTC‑TGGGA‑AAAAAAAAGACTGGTCA‑C‑GGGGAAAATTTGGTGCTGGTGTGTATCGTCccttct > 1:235274/1‑239 (MQ=255) ttCAGAAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCttt < 1:727694/239‑1 (MQ=255) aaa‑CCTTCTGCGGTTTTGTTGGCAAAGTCGCGAAAATAAAGGGAAAAAGA‑TCTTAAAAATAATAAGAGAAAGGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTta < 2:1228898/239‑1 (MQ=255) tttAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGGCAAACCAACATCACCGGCAATCCGGCATGGCAAGTCGTTAGGGCC‑TGGGG‑AAAAAAAAAACTGGTCA‑C‑GGGGAAAAATTTGTGCTGGTGGTTATCGTCTCTTCTTTCTTTTTAGTGgaaaaagga > 1:305240/1‑235 (MQ=255) ttaaGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTa < 1:1023653/184‑1 (MQ=255) ttAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAAGGCTTTAGGGGCATATCACCGTCAATCCATCATCCCCCGCATTCCGTCATGGGCAGTCGTTAGGCCC‑TGGGT‑AAAATAAAAACTGGTCA‑C‑CGGTAAAATTTTGTGCTGGTGCTTTTAGTCTCTTCTTTCGTTTTAGGGCAAAACAGaa > 1:46945/1‑239 (MQ=255) tGCAGAAGGTGAGAAATAAAAGGA‑AAAAGG‑TCTGAAAAATTAGAAGGAAAAAGCCGCCACAAAGGTATTGGCGGTAGTCCATAAAGTTATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtca < 2:106146/239‑1 (MQ=255) gCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAATGATTGAGGGGCATATCACGGGCAATCCATCATCACCCGCATTCCGTCAAGGCAAGTCGTTAGGCTC‑TGGGA‑AAAAAAAAAACTGGTCA‑C‑CGGGAAAATTTTGTGGCGGTCGTTTTCGTCTCTTCTTTCGTTTTAGTGAAAAAAAGAAAGccat > 1:401172/1‑239 (MQ=255) aaggggagaatttAAGGGG‑AAAAGA‑TCCTGAAATATAACAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtca < 1:1253051/223‑1 (MQ=255) gaCATAAAAGGG‑AAAAGG‑TCATGAAAATTACAAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGgga < 1:758157/238‑1 (MQ=255) aGGT‑AAAAGC‑TCCGAAAAATTATAAAAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAAc < 1:1240155/239‑1 (MQ=255) aGGG‑AAAGGA‑CCCTGAAAATTGCGAAGGAGACGCCGGTACAAAGTTATTGGCGGTAGGCCAGAAAGTCAGTGAGGATCATATCACGGTCAATCCAGCAGCGCCGGCATTCCGTCATGGCAAGTCGTTAGGCGC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTGCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGTAc < 2:698648/239‑1 (MQ=255) agg‑AAAATATTCCTGTAAATTATAAAAAAAAGGCCGCCACAAAGTTATTGGCGGTAGTACATAAAGTGAATGAGGAGCATATCACGGTCAATACATCAACACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAATACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAAc < 2:157233/238‑1 (MQ=255) tCCTAAAAATAACCAAAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAaca < 1:452305/239‑1 (MQ=255) tgaaatattaaagaaAAAACCCGCCACAAAGTTATTGGGGGTAGTCCATAAAGGGATTGAGGAGCAAATCAGCGTCAATCCATCATCACCGGCATTCCGTAATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACActc < 2:1250172/228‑1 (MQ=255) aaaaTTTACAGAAAAAAGCCGCCACAACGTTATTGGGGGTAGTCCAAAAAGTTATTGAGGTACATATCACGGTCAAGCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTg < 2:411923/239‑1 (MQ=255) aaaaTTATCAGAAAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTg < 1:888360/239‑1 (MQ=255) ggaaaagaGCCGCCACAAAGTTAGTGGCGGTAGGCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCAACGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTAc < 1:35882/232‑1 (MQ=255) agaaAAATGCCTCCAAAAATTTTATTGCGGTAGGCCATAACGTGATTGAGGAGCAAAACACGGTCAATCCATCATCACCGGCATTCCGTTATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGTTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTAc < 2:1195701/239‑1 (MQ=255) agaaAAAAGCCGCCACAAAGGTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTAc < 1:426826/239‑1 (MQ=255) tctaaatgTTATTAGCTTTTGTCCAAAAAGTGATTGAGGATCTTGTCCAGGTTAGTACATCAACATCAGTAATCCGTTATTGCAAGTCTGTATGCAC‑GGGGA‑AACATAAAGGCTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTTGCTTCTTTAGTTATAGTGAAAAAGAGAAAGTAATCATTCTAGTATGGATGAACGATGACAACACTCTGCGCACCTACGGTAAAAAAACa < 2:593562/232‑1 (MQ=255) ccACAAATTTAGTGGCGGTAGTCCATAAAGTTGTTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGGCTGGTCA‑C‑GGGTAAAATTTTGTGCTTGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 1:311065/239‑1 (MQ=255) ccAAAAAGTTTTTGGCGGTAGTCCAAAAAGTGATTGAGGAGCAGATCCAGGTAAATCCAACATCACCGGACTTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 2:305240/239‑1 (MQ=255) cacaaaaGTTTTTGGGGGTATTCCAAAAAGGGTTTGGGGGTAATTTCCAGGTCAAACCAACAACACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 2:56109/235‑1 (MQ=255) caaaaaGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 1:1020484/235‑1 (MQ=255) acaAAGTTTGTGGCGGTAGTCCATAAAGTGATTGAGGGGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTGTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 2:136215/239‑1 (MQ=255) acaAAGTTATTTGCGGTAGTCCATAAAGTGATTGAGGAGCATATCCCGGTCAATCCATCATCACCGGCATTCCGTCATGGAAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCGCTTCTTTCGTTAGAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 2:401172/239‑1 (MQ=255) acaAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 1:485986/239‑1 (MQ=255) aacaatttATTTGCCGTTGCCCATAAATTGAGTGAGGACCATTTCACCGGCAATCCATCATACCCGCGATGCCGGCATGGCAAGGCTTTAGTGTG‑TGGGA‑AAAATAAAGCCCGGTCA‑C‑GGGTAAAATTTGGTTCTGGTCGTTATCGTCTCTTCTTTCTTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGTTAAAAAAACAGa < 2:858903/233‑1 (MQ=255) caAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGAt < 1:1060007/239‑1 (MQ=255) aatttAGTGGCGGTAGGCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGc < 1:530624/236‑1 (MQ=255) aaGTTTTTGGCGGTTGTCCAATAAGGGATTGAGGGGCATATCACGGGTAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGc < 2:428320/239‑1 (MQ=255) aaGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGc < 1:537623/239‑1 (MQ=255) ttATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCt < 1:1038664/238‑1 (MQ=255) tATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCt < 1:58331/237‑1 (MQ=255) ccATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTGCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 1:1247036/219‑1 (MQ=255) ccATAAAGGGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTTATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCtata < 1:1061843/227‑1 (MQ=255) cttaaGTGATTTGGGGGGATATCGCGGGAAATGCATCATAACCGGGATTCCGTCATGGCAAGGTGGTAGGGTC‑TGGGA‑AAAATAAAGGCTGGTAA‑A‑GGGTAAAATTTGGTGCTGGTCGGTAGCGTCACTTCCTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCGGCGCACCTACGGTAAAAAAACAGATGCCTATCACGTATTCAGCaaa < 2:356710/236‑1 (MQ=255) aTAAAGTGATTGAGGAGCATATCCCGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCaaa < 1:125034/239‑1 (MQ=255) aTAAAGTGATTGAGGAGCATAACACGGTCAATCCATCATCACCGGCATTCCGGCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCaaa < 1:640612/239‑1 (MQ=255) aaaGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAAt > 1:721720/1‑239 (MQ=255) aGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAACCAGATGCCTATCCCGTATTCAGCAAAATGt > 1:213305/1‑239 (MQ=255) tGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCATCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGc < 1:511664/214‑1 (MQ=255) | ATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGGTTAATGGTTG‑GGCGCTATATGCTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGG‑AAAAGA‑TCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTC‑TGGGA‑AAAATAAAGACTGGTCA‑C‑GGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGT > NC_000913/3277266‑3277736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |