| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,665,655 | T→A | 10.6% | V52V (GTA→GTT) | gadX ← | acid resistance regulon transcriptional activator; autoactivator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,665,655 | 0 | T | A | 10.6% | 286.2 / 4.8 | 108 | V52V (GTA→GTT) | gadX | acid resistance regulon transcriptional activator; autoactivator |
| Reads supporting (aligned to +/- strand): ref base T (61/33); new base A (6/8); total (67/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 110 total aligned reads displayed.
TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665422‑3665863 | ttcacATCCTCAAGAAAAACAGATAACAACGGAAAGATTAATTCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACaaa < 2:1245409/235‑1 (MQ=255)tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATATTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTAT‑ATGT‑GCATGAAGATTTAATGCCTCATCC‑TTGAGCTTCTGGAGAAATAATGAAA‑GAGGGTCCCTTGAC‑ACAaaaaaaaa > 2:1040359/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAAt > 1:534787/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGGGTCCCTTGAC‑ACGCATACAAAAt > 1:946846/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGGGTCCCTTGAC‑ACGAATACAAAAt > 1:1256413/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GAATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAAAAAAAAAt > 2:1136680/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGGGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAAtt > 1:532828/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GAGGTTCCCTTGAC‑AAGAAAAAAAAAtt > 2:658009/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATTT‑GCATGAAGTTTTAATGCATCCTCC‑TTACGCATCGGGCGAAATAATTAAA‑GATAGTCCCTTGCA‑CCAAAAACAAAAtttt > 2:529693/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑TCATGAAGATTTAATGCCTCCTCC‑TTGAGCAACGGGAGAAATAATGAAA‑ACGTGTCCCTTGAC‑ACGAAAACAAAAtttt > 2:947642/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAAtttt < 1:1297100/239‑1 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAAAAAAAAAttttaa > 2:655987/1‑237 (MQ=255) ccTCAAAGAAAGAAGATAAAAACGCAATGATTAGTCCTCTTTTACGTTGTCATTT‑TGCATAAGGAATATTCTTATTCCGCGCTAGTTGGTCAACTTCCTGAAAAACAGG‑AATATCGCTACTGCAGTGATGGACGAGTAATGAAGAAACTTTTTT‑ATTT‑GCATGATGATCTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGAGCCTTGAG‑ACGAATGCAGAGTTTT‑C‑a < 2:468220/239‑1 (MQ=255) cttcaGAAAACCATATTACAACGCTAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAATTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:75719/235‑1 (MQ=255) cTCAAGAAAAACTGATAACAACGGAAAGATTTATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTTATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:534787/239‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:529693/239‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGAAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:655987/239‑1 (MQ=255) cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aaca < 1:546056/239‑1 (MQ=255) aaGAAAAACGAAAAACAAATAAAATATTAATGCGTTTTTACGTAG‑CATTTCTGCATAGCAAAGATTCTTATTCTGTGATAGGTGCGCAACTGCCTGAAAAACAAG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATTCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTTTCCCTTGAC‑ACGAATACAAAATGTT‑c‑accac < 2:1024595/239‑1 (MQ=255) aGAAAAACAAATAACAACGCAAAATTTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATGCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacaca < 2:94251/239‑1 (MQ=255) aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacacac < 1:61344/237‑1 (MQ=255) acccAAAGATTAATTCTCTTTTTCGTGA‑CCTTTTTGCAAAGCGAAGATTCTTATTCTGCAATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCACCGGGAGAAATAATGAAA‑GCGTGTTCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAAtt < 2:507493/236‑1 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGCTAGTTGCGCAAATTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCCTCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCCTCCGCaaaa > 1:1070255/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCaaaa > 1:1174453/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCaaaa > 1:974613/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCaaaa > 1:94527/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGACTCCCCaaaa > 2:18165/1‑239 (MQ=255) ttttACGAAG‑CATATCTGCATAGCGAAGGTTCTTATTCTGCGATCGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTAAAGTGATGAACGTGTAATGAAGCAAGTTTTTT‑ATGT‑GCATGATGATTTATTGCCTCCTCC‑TTGAGCATCGGTAGAAATAATGAAA‑CCGCGTCCTTTGAT‑ATGTATCGAAAATTTC‑C‑AAAACAC‑TTACCAACCCCAATTTTGCTTCAATACGCaaaa > 2:239877/1‑239 (MQ=255) tACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAAcc > 1:134976/1‑239 (MQ=255) tAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAgg > 1:926960/1‑238 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCa > 1:834577/1‑238 (MQ=255) cTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCTTCGGGAGAAATACTGAAA‑GCGTGTCCCTTGCC‑ACGAATACAAAATTTT‑C‑ACCACAC‑TTATCTCATCGAATTTGGCTTGCATCCGCAAAAACAAGGACACccccc > 2:51181/1‑238 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacaca < 2:328572/185‑1 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacaca > 1:328572/1‑185 (MQ=255) cGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAACCCAGGCCACCGCCATTAAAATa > 1:1252337/1‑239 (MQ=255) cTTATTTGGCAATTGTTGCCAAACTTCCGAAAAAAAGGG‑AATATCTCTCAAAAAGTAATGAAGGAGAAATGAAG‑AACTTTTTT‑TTGTGGAATGAAGTTTTAATCCCTCCTCC‑TTGGGAATGGGGAAAAATAATGAAA‑GCTTGTCCCTTGAC‑AAAAATACAAAATTTA‑C‑ACCACAC‑TTATCTACTAGATTTTGGCTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATAtt < 1:357177/239‑1 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTCCTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGAATCCGCACAAACCAGGTCACCGCCATTAAAATAGCGATCtttcccttt > 1:182347/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGATTACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCGGCAAAAACCAGGTCACCCCAATTAAAAAAGGGAAAttaaacctt > 2:543555/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACACAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAACAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCAtt > 1:1018220/1‑239 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCACC‑TTGATCATCGGGAGAAATAATGAAA‑GCTTGTCCCTTGAC‑CCGATTa > 2:726584/1‑151 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTCCAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑ac > 2:879100/1‑160 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:879100/161‑1 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGAATTT‑CACATTTaa > 1:464688/1‑239 (MQ=255) ttGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAAc > 1:365936/1‑234 (MQ=255) tGCGCACTTTCCTGAAAAACGGT‑AATTTCTCTACAAAAGTGATGAACGAGTAATGAATAATCTTTTTT‑ATGG‑TAATGAAGATTTAATCCCTCCTCC‑TTGAGCATCGGGAAAAATAATGAAA‑GCTTTTCCCTTGAA‑AAAAATAAAAAATTTT‑C‑AACACTT‑TTATCTACTCAATTTTGGTTTGCACCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGt < 1:247198/239‑1 (MQ=255) gcgcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGCCACCGCCATTAAAATAGCGAAATT‑AACCATAAACCAAggga > 2:1010255/1‑237 (MQ=255) gcgcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAAAGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAAAAGCACTATT‑AACCATTAACCATgggg > 1:641902/1‑237 (MQ=255) cgcaattgtatGAAAAACGGG‑AATTTTCTTACTAAGTTTATGAACGAGTAATAAAGAAACTTTTTA‑ATGG‑CCAAAAAATTTTAAGCCCTCCACC‑TGGAGCAGCGGGAAAAATAATGAAG‑GGGTGCCCCCAAAC‑ACAAATAAAAAATTTA‑A‑AACACAT‑TTATCTACCCAATTTTGGCTTGAATCCGAAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTga < 1:943548/229‑1 (MQ=255) gcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGCA‑CCGAATACAAAATTTT‑C‑AACACAA‑TTCACTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTAACCCCCATTAAAATAGCGATATT‑CACCATTAACCAGGGGgaa > 2:1254492/1‑238 (MQ=255) gcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTgag > 1:987784/1‑239 (MQ=255) acatttctaaaaaaaGAGA‑TATATCTCTCATAAAGGAATG‑ACGAGAAAAGAAAAAACTTTTTT‑ATGT‑GGAATAAAATTTTATGCCCCCCCCTTTGAGCATGGGAAAAAAAAAGAAAA‑GCGTGTCCCTTGCC‑A‑GAAAAAAAAATTTT‑C‑AACCCCCTTTATCTACCCAATTTGGGCTTGCATCCGAAAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTgaga < 1:543555/229‑1 (MQ=255) catttgcaaaaaaaaAGA‑AATTCCTCTAATAAGGGGATGAACGAATAAAGAAAAATTTTTTTT‑TGGT‑GAAAGAAATTTTAATGCCCCCCCC‑TTGAGCAGGGGGAAAAAAAAGAAAA‑GCGTTCCCCTTAAA‑ACAAAAAAAAAATTTT‑A‑AACCCCC‑TTTTCTACTCTATTTTGGCTTGCACCCAAAAAAACCAGGTCCCCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGaa < 1:66081/230‑1 (MQ=255) aatttccaaaaaaaCAAG‑AATACCTCTACTCAGGGGAAGAAAGAATAAGAAAAAAATTTTTTT‑ATGT‑AAAATAAGATTTAATCCCCCCTCC‑TTGACCATGGGAAAAAATAATAAAG‑GCGTGTCCCTTGAC‑ACGAATAAAAATTTTA‑C‑ACCCCAC‑TTATCTACTCGATTTTGGTTTGCACCCACAAAACCCGGTTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGaa < 1:358150/230‑1 (MQ=255) aatttcaaaaaaaaAGGAAATTTCCCTACGACATGGATAAACGAG‑AAAGAAAAAATTTTTTTGAGGT‑GAATGAAGATTAAGTCCCTCCCCC‑TGAAGCATCGGAAAAAATAAGAAAA‑GCGTGCCCCTTGAC‑ACAAATACAAAATTTT‑C‑AACACTC‑TTATCTACTCGAATTTGCCGTGCACCCGAAAAACCCAGATCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGaa < 1:1255281/231‑1 (MQ=255) tttccaaaaaaaCAGG‑AATATCTCTACTGAAGTAAGAAACGAGTAATGAAAAAATTTTTTT‑ATGG‑GAAGAAAGTTTTAATGCCTCCTCC‑TTGGGCAGCGGGAGAAAAAATAAAG‑GGGTGTCCCTTGAC‑CCAAATA‑AAAATTTT‑CAAACCCTC‑TTATCTACCCAAATTTGGCTTGCACCCGAAAAAACCAGGCCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAata < 1:1136680/232‑1 (MQ=255) cTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATAtt > 1:44077/1‑239 (MQ=255) aaaCAGG‑AATCTCTCTACTACAGTTAAGAAAGAAAAATAAAAAAATTTTTTT‑AGGT‑GCATGAAGATTAAATCCCCCCCCC‑TTGAACATGGGGAAAAATAATGAAA‑GCGTTCCCTTTGAC‑ACAAATAAAAAATTTC‑C‑AACACAC‑TTATCTACTCAATTTTGGCTTGCACCCGCAAAACCCGGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGt < 1:1010255/239‑1 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑AACCATTAACCATGTTGAGAATATATTTATGCCTTGCAt > 1:170549/1‑238 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATAAAAAATTTT‑A‑AACACAC‑TTATCTACTCGAATTTGGCTTGAATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTACACATGGTGAAAAAACATTTATGTCttcaaa > 2:1104902/1‑234 (MQ=255) tctACTACAGGGATGAACGAGTAATAAAGAATCTTTTTA‑ATGT‑GAAAGAAATTTTAACCCCTCCCCC‑TTGAGCATCGGAAAAAATAATAAAA‑GCGTTCCCCTTGAC‑ACAAATACAAATTTTC‑C‑AACACAT‑TTATCTACTCAATTTGGGCTTGCACCCAAAAAAACCAGGTCCCCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGaa < 1:665917/215‑1 (MQ=255) actacAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCCTTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAAAATATTTATGTCTTGCAAACGAAAtaa > 2:699988/1‑237 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATTCAAAATTTT‑C‑aa < 2:385069/118‑1 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 1:385069/1‑118 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCATCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGTCTTGCATCCGCAAAAACCAGGTCCCCGCCATTACAATCGCGATATT‑CACCATTAACCATGGTGAGAATATATATATGTCTGGCAAAGGCAAATAGACa > 2:650116/1‑239 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACaaa < 2:889179/107‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACaaa > 1:889179/1‑107 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a > 1:519621/1‑114 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 2:519621/114‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:886748/113‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 2:886748/1‑113 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCTCCATTAAAATAGCGCTATT‑CACCATGAACAATTGTGAGAATAAATTTATGTCTTGCAATCGCAATTAGTCAATTc > 1:706516/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATg > 1:410580/1‑213 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAcctgtct > 1:859175/1‑233 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 1:1285586/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 1:608394/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 1:1110994/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAACATTATT‑CACCATTAACCATGGGGAGAAAATATTTATATATTGAATACGCAATTAAAAAATTcc > 2:1226981/1‑239 (MQ=255) atgaACGAGAAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACAAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCAAATTTGGCTTGCATCCTCAAAAACCAGGTCACCGCCATTAAAAAAGCGATATT‑CACCATTAACCATGCTGGTAATATATTTATGTCTTTCATACGAAATTAGACAATTc > 1:754674/1‑238 (MQ=255) aaCGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAAAAGCGCTATT‑CACCATTAACCATGGTGAGAATCTATTTATATCTTTCATACGCAATTAAACAATTCCCaa > 2:1280265/1‑238 (MQ=255) cGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAACCCAGGTCACGGCCCTTAAAATAGCGCTATT‑CCCCATTAACACTGGTGAGAAAATATTCATTTCTTGCTAAAGAAATTAGACAATTCCAATga > 2:913389/1‑238 (MQ=255) gTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGt > 1:1149030/1‑239 (MQ=255) taaaaattttttttt‑ATTT‑ACATGATTATTTACCCCCCCCCTC‑TTCAGCATGGGGAAAAATAAT‑AAG‑ATGTTCTCCATGACTACAAAAAAAAATTTTA‑C‑AACACAC‑TTATATACAGTATTTTTGTTTCCATCAAAAAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGAtt < 2:1285586/230‑1 (MQ=255) tttttttt‑ATTG‑GCATGAATTTTTAACCCCTCCTCT‑TGGAGCATGGGAAAAAATAAGGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTCT‑C‑AACACTT‑TTATCTCCTCGAATTTGGCTTGCATCCACAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt < 1:699988/237‑1 (MQ=255) tttttttt‑ATGT‑GATTGAAGTTTCACTCCCTCCCCC‑TTGAACATAGAGAAAAAAAAGAAAC‑GTTTGTCCTGTGAT‑CAAAATAAAAAAATTA‑A‑AACACAC‑TTATCATGTAGATTTTGTATGTGACCCGCAAAACCCAGTGCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGt < 2:134976/237‑1 (MQ=255) aCTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGCATATATTTATGTCTTGAATAGGCAATTATACAATTCCAATGTACGAATTCCATAGt > 1:1014665/1‑239 (MQ=255) tttattgacATAAATATTTAATGTCCCCTCC‑TTGAGCAGCGGGAAAAATAAGGAAC‑GCTTCCCCTTTGAC‑ACAAATAAAAATTTTA‑C‑AACAATC‑TTATTTACACAAATTTGCCTTCACCCCGCAAACACAAGTTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACt < 1:401604/231‑1 (MQ=255) gt‑gCATGCAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCGCTTGAC‑AAGAATACAAACTTTT‑T‑AACACAC‑TTATCTACTCGAGTTTGGCTTGCATCCGCATAAAACTGGTAACCCCCATTAACATAGCGCCATTACACC‑TTAACCATGGTGGCGATATATTCATGTCATCCATACGCAATACAACCATTGCAAAGTACTGTTTGCATAGTTGACTaaaaa > 2:271075/1‑237 (MQ=255) taaattttAATGCCCCCTCC‑TGGAGAACGGGAAAAAAAAATGAAA‑GGGGGCCCCTTGAC‑AAAAATAAAAAATTTA‑C‑AACACTC‑TTATCTACCCGAATTTGGCTTGCACCCAAAAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACAt < 1:138100/234‑1 (MQ=255) gaatttttAATCCCCCCTAC‑TTGAACAGGGGGAAAAATAAAGAAG‑GCGTCTCCCTT‑AC‑AAAAAAAAAAAATTTTAC‑AACCCTT‑TTATCTCCTAAAATTTGGCTTGCACCCAAAAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACAt < 1:1226981/234‑1 (MQ=255) aaataTTTACTGCCCCCCCC‑TGGAGCA‑GGGGAAAAAAAAAGAAAGGCTTTCCCCTAGAC‑AAGAAAAAAAATTTTC‑C‑ACCCCAT‑TTTTCTACTCTATTTGGGCTTGCACCCAAAAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACAt < 1:249728/235‑1 (MQ=255) agagTTAACGCCTCGTCC‑TGGAGCATGGGGAAAAATAAGAAAA‑GTGGCTCCTTAGAC‑A‑GAAAACAAAATTTTCC‑AACATAT‑TTATCTACTAGATTTTGGCTTCCTCCCAAAAAAACCAGGTAGCCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATaa < 1:239877/239‑1 (MQ=255) tttAAGCCCCCCGCC‑GTGAACAACGGGAAAAAAAAGAAAG‑GCTTCTCCCTTGAC‑ACAAAAAAAAATTTTC‑C‑AACACAC‑TTATCTACCCAATTTGGGCTTGCACCCGAAAAAACAAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACa < 1:18165/239‑1 (MQ=255) cctcc‑tTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 2:725862/1‑63 (MQ=255) cctcc‑tTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:725862/63‑1 (MQ=255) ctcc‑tTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGt > 1:1230571/1‑196 (MQ=255) tCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAata > 1:47405/1‑206 (MQ=255) cGGGAGAAATAATAACA‑GCCTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGACTTTGGCTTGCATCCGCCAAACCCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATCATCCATGTTGAGCATTTATTCATGTCTTGCATACGCAATTATACAATTCCCATGCAGTGATTGAATTGTTGATTTAAAA‑TTACATAAAAAAATACCTGTTATTTAAtatacc > 2:218223/1‑236 (MQ=255) gggAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCCTGGTGAGAATCACTTTATGTCTTGCATACTCAATTAGACAATTCCCATGGAGTGATTGCATAGTTGAATTAATATTTACA‑AAAAAAATTTCTTTTTTTTAATGTAACa > 2:868180/1‑238 (MQ=255) aaaTAAAGAAA‑GCTTTCCATTTCAC‑ACAAAAACAAATTTCA‑C‑AACTCCC‑TTACCCACTCAAATTTGCCTTGCCACCCAAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACTCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCAcgccgc < 1:315135/239‑1 (MQ=255) aTACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAg > 1:610798/1‑159 (MQ=255) | TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAATGCCTCCTCC‑TTGAGCATCGGGAGAAATAATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACACAC‑TTATCTACTCGAATTTGGCTTGCATCCGCAAAAACCAGGTCACCGCCATTAAAATAGCGATATT‑CACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAGTGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665422‑3665863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |