| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,027,203 | T→G | 6.8% | T191P (ACA→CCA) | yccT ← | UPF0319 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,027,203 | 0 | T | G | 6.8% | 172.5 / 2.2 | 61 | T191P (ACA→CCA) | yccT | UPF0319 family protein |
| Reads supporting (aligned to +/- strand): ref base T (32/24); new base G (3/2); total (35/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
CACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCGCCATCCAACAATTCAAG > NC_000913/1026965‑1027428 | cacccGCCCAATTTGTTTCCGGGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCtgt < 2:843656/239‑1 (MQ=255) ccaGCGGAATATGTTGCCGGGCAGGTAAAGTGCGGGTCGGCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGa < 1:409134/239‑1 (MQ=255) cgcAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGCTGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTTGGAGCa > 1:898572/1‑238 (MQ=255) cgcAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTGGTTCTGTGAGCa > 1:333320/1‑238 (MQ=255) tttCCGCGGAGGTAAAGGTGGATTCTTCAGTTCCATAATGTACATCCGTAATTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTg < 2:436767/239‑1 (MQ=255) tttCCCCGCGGTAAAAGTGGGATTTGCCGGTTCCATAATGTACAACCGTTGTTAACTTTCCTACAAATTACGTTAAGCACTTAGTGGGGCAAGATAAAGACCGAAAACGCCGGCGCACAGGCACAAAAATCTCAGGAAGATGGGTGTTTTTCCTCCCCCGGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACTTGCGACTg < 2:557226/239‑1 (MQ=255) ttacgcgAAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTACCTTTCCTACAGCTTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGCGTTT‑TGGGTTACACCAGCTTACACCCAACATTCAACCGTTGTTCTGTGGGCACCTAAGGCTgg > 2:767871/4‑238 (MQ=255) ttCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCAAAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGAATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGGGACtcc > 1:93565/1‑237 (MQ=255) tcggcgcAGGTAATGTGTGAGTCGTCAGTCCCATAATGTACATCCGGATGTAACTTTCCCACAGATTGCTGTAAGCACTTATCGATGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCg < 2:773559/236‑1 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCCGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCACAACTTCAGCCGTTGTTCTGTGAGCACCTGCAACTGCgggga > 2:175625/1‑236 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTTCGGTgg > 1:262435/1‑239 (MQ=255) cgcAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGCGACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCCGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAACCCAATACTTCAGCCGTTGTTCTGGGAGCACCTGAGACTACGATgg > 1:324773/1‑239 (MQ=255) ggTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATCCTTCAGCCGTTGTTCTGTGAGAACCTGAGACTGCgtgggaga > 1:656572/1‑231 (MQ=255) agtcagattcttcAGTTCTATGATGTACATCCGTAGTTAACGTTCCTTCTGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAACCCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATc < 2:210929/228‑1 (MQ=255) cggcAGTTCCATAATGTACCTCCGTAGTTAACTTTACTACAGATTACTGTAAGCCATTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCTCAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATGCTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGa < 1:704078/236‑1 (MQ=255) tcATTTCCATAATGTACCTCCGTAGTAAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGaaa < 2:470021/239‑1 (MQ=255) cATAATGTCCATTCGTTGTTAACTTTCCTACAGATTACTGTAAGCACTTATCACTGCAAGAAAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGa < 2:231956/239‑1 (MQ=255) tgtaactCCTTAATTAACTTTCCTACAGATTACTTGAAGCACTTAACGCTGCAAGATAAAGGCCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATGTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAagca < 2:285116/233‑1 (MQ=255) aacagcagTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAATACCGAAAAAGCCTGCGCACATGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGCATTTCGCGTTCGTGGGTAC‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTTACCACCTGTAACTGCGGTGGAAAAGCATCCAACCCGGGAACACCCGCAaacaac > 2:883566/8‑237 (MQ=255) ctcctttgTTAACTTTCCAACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAAGCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCAGCCAGCTCGGAAACACCCGAAAGCAGCGTa < 2:898572/232‑1 (MQ=255) aTCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGCAAGAATTTCGCGTTTGTGGGTCG‑GCCAGTTTAAACCACTCCTTCAGCCGTTGTTCTGTGAGCTCCTGAGACTTCGCGGGAATAGCATCCACACAGGAAAAACCCaaaaaaacgtct > 2:60840/1‑231 (MQ=255) ccGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAATCCTGCGCACAGGCACAAAAATCTCAGCAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGATTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCTTTGTTCTGTGAGCACCCGAGACTTCGGTGGAATa > 1:402105/1‑204 (MQ=255) tAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTg < 2:136133/191‑1 (MQ=255) tAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTg > 1:136133/1‑191 (MQ=255) tAACTTTCCTAAAGATTCTTGTAAGCCCTTAGTGCTGCAAGATAAAGCCCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTCTCCGCCCACTGCAGTAAAGTATTTCGCGTTTGTGGGTCA‑GGCAGGTTAACCCAATACTTCAGCCGTTGTTCTGTGAGCCCCAGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCAt < 2:749077/237‑1 (MQ=255) tCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCACTACTTCACCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGCATAGAATCCAGCTCGGAACCACCCGAAACCAGCGTACTGTCATCttcac > 1:344371/1‑233 (MQ=255) tgaaGCACTTATCGCTGAAAGATAAAGACCGAAAAAGCCTGCGCAAAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATTCTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTg < 2:333320/237‑1 (MQ=255) tAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCACCTCGGAAACACCCGAAAGCCGCGTAATGCCATATGCAACAACCGCGGCAAAATGc > 2:74665/1‑239 (MQ=255) aaGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTGAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCAGCATCGTGGCAAATTGCg < 2:572550/239‑1 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGAc < 2:836018/162‑1 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGAc > 1:836018/1‑162 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCgg > 1:779871/1‑239 (MQ=255) aGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCgg > 1:680260/1‑239 (MQ=255) ttATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑TCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCCACTCGGAAACACCCGAAAGCAGCGTACTGTAATCTGCCTTCACCGTGGCAAATGGCGGGAgga > 2:384863/1‑237 (MQ=255) tATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTgaga < 1:27138/155‑1 (MQ=255) tATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTgaga > 2:27138/1‑155 (MQ=255) tATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGa > 1:716886/1‑239 (MQ=255) aaaGACCGAAAAAGCCTGCGCACAGGCACAAAATTCTCAGGGAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCgg < 2:554319/239‑1 (MQ=255) gAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGGGAGCACCTGAGAc < 2:726777/135‑1 (MQ=255) gAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGGGAGCACCTGAGAc > 1:726777/1‑135 (MQ=255) aaaaaGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGCAAGCAGCGTACTGTCATCTGCCACCATCGTGGCAAATTGCGGGAGTGAAGCGCGGTTCCGGGAGTTTTta > 2:634110/1‑239 (MQ=255) aaaaaGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGGTTTGTta > 1:845862/1‑239 (MQ=255) acaGGCAAAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCt < 1:287077/239‑1 (MQ=255) caAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGGGGCAACTTCCGGTAGGGAAGCGCGTTTCGCGGATTTGTTAAAGCTTTCAAcccggacgcc > 2:114437/1‑231 (MQ=255) ctcAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGCCTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCACCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTCCCCGGATTTGTTATACGTTTAAACCCCGCCCTCacacaca > 2:18617/1‑233 (MQ=255) ggTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAACCAGTCGTTTTTg > 1:632404/1‑238 (MQ=255) tttttttCCGCCCACTGAAGGAAAGTATTTCGTGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCAACTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGt < 2:171340/237‑1 (MQ=255) ttCCCCCCCCTTGAGGAAAGTATTTCGGGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGGTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAgg < 2:845862/239‑1 (MQ=255) tGCAGGAAAGTATTGCGCGTTTGGGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCgag < 1:302302/239‑1 (MQ=255) tATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGCAACACCCGAAACCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGCATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGCGTTAATGGCGGGACTATccc > 1:605722/1‑236 (MQ=255) tATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGATTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGCAATGGCGAGAATATCCa > 1:520387/1‑237 (MQ=255) tATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGAGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGAGGATTTGTTATAGCGTTCAACATCGACCTTATAATCATCCGTTTTTGCCGTTGAGGTATTGGCGGGAATAACCa > 1:59800/1‑237 (MQ=255) tttCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGGGGGAAAAACAAGCtt > 2:846474/1‑239 (MQ=255) tttCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTAATCTGCCTTCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATACCGTTCACCCCCGACCTACTAATCAATCGTTTTTGCCGTTGCGGTAATGTCACGAACATCCACCtt > 1:837828/1‑239 (MQ=255) cgcgTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAag > 1:652048/1‑101 (MQ=255) cgcgTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAag < 2:652048/101‑1 (MQ=255) cgTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTATTGGCGAGAATATCCAGCTTTACCg > 1:326237/1‑239 (MQ=255) tCA‑GCCAGTTTAAACCAATACTGCAGCCGTTGTTCTGGGGGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCg < 1:18617/238‑1 (MQ=255) gCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTAACGGAATCGGCGTc > 1:626346/1‑237 (MQ=255) ttAAACCAATGCTTCAGCCGTTGTTCGGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACATCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCg < 1:767871/237‑1 (MQ=255) cAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCGCCATCcaa < 1:634110/239‑1 (MQ=255) gCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGTCGAGAATATCCAGCTTTACCGGAATCGGAGTCGCATCGCAATCCAACAATTCaaa > 1:93871/1‑237 (MQ=255) | CACCAGCGCAATATGTTTCCGCGCAGGTAAAGTGCGAGTCGTCAGTTCCATAATGTACATCCGTAGTTAACTTTCCTACAGATTACTGTAAGCACTTATCGCTGCAAGATAAAGACCGAAAAAGCCTGCGCACAGGCACAAAAATCTCAGGAAGATGGTTGTTTTTCCGCCCACTGCAGGAAAGTATTTCGCGTTTGTGGGTCA‑GCCAGTTTAAACCAATACTTCAGCCGTTGTTCTGTGAGCACCTGAGACTGCGGTGGAATAGCATCCAGCTCGGAAACACCCGAAAGCAGCGTACTGTCATCTGCCATCATCGTGGCAAATTGCGGTAGTGAAGCGCGTTTCGCGGATTTGTTATAGCGTTCAACCTCGACCTCATAATCAATCGTTTTTGCCGTTGAGGTAATGGCGAGAATATCCAGCTTTACCGGAATCGGCGTCGCATCGCCATCCAACAATTCAAG > NC_000913/1026965‑1027428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |