| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,796,104 | C→T | 15.0% | S144F (TCT→TTT) | csiR → | transcriptional repressor of csiD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,796,104 | 0 | C | T | 15.0% | 125.9 / 2.3 | 56 | S144F (TCT→TTT) | csiR | transcriptional repressor of csiD |
| Reads supporting (aligned to +/- strand): ref base C (12/35); new base T (6/3); total (18/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTA > NC_000913/2795869‑2796339 | gTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTtctc < 1:843051/238‑1 (MQ=255) ggCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGTTGAGTGGGATCTGCGTCCTCAGGCGTTTCATACGGCAATTGTGGCGGGGGTGGGGTtctc > 1:833533/1‑237 (MQ=255) gCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTTTGGTTCTCCCtt > 1:367980/1‑238 (MQ=255) tgtATGTCAGAGAAGGGGCTGCTCGATATTTTCGGCGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTAtt < 1:881913/236‑1 (MQ=255) tCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGGGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTAtt < 1:36492/238‑1 (MQ=255) tCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGAGGTGGCGTTGATTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGCGGAAGCTTGAGGCCTGTGACGCCAGCGAGAACAACCCTGATGGGAGGGATCTGCGTCATCCGGGGTTTCATACGGCAATTGGGGG‑GGGGCGTGGGtcctccttat > 2:715604/1‑230 (MQ=255) cagtGTCAGGGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTAtt < 1:692336/234‑1 (MQ=255) tCAGAGCCGGGTCTGTGCTATATTTTCGACGCCCGCGCCAATATGGAAGGTGGGTGAGTGAGTCTGGCGATTGCCCGCGGGGGGGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCa < 2:731407/239‑1 (MQ=255) cAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGGCTTCAGGCGTTTCATACGGCAATTGTGGG‑GGGAGGCGGTGTTCACTATTtgcggaca > 2:209709/1‑234 (MQ=255) gAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCGGTGGGTCTCCCACTTTTTTGCAAATGCGTGa > 1:638205/1‑239 (MQ=255) aGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTtc < 1:696103/214‑1 (MQ=255) gttgtgtgttatTTTCGACGCCCGGGGCAATATGGAAGCGATGTTGGGGGGTTTGGGGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGaa < 2:51589/229‑1 (MQ=255) ctgctCGATATGTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAAc < 1:670598/238‑1 (MQ=255) tttttcgcccccGGGCCAATTTGGAAGCGATGTTGGGGAGTCTGGGGGTTGGCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGAt < 2:596838/230‑1 (MQ=255) gCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTAATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTggcgg < 1:575645/238‑1 (MQ=255) ccGCGCCAATATTGATGCGATGTTGGTGGGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGGTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATATGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGgcggcg < 2:350589/238‑1 (MQ=255) cgctgcAATATGGAAGCGATGTTAGGGAGTCTGGCGGTTGCCCGGGGTGGCGATGAGTGGGAGGCAGACGTTCTCGAAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGcgcg < 1:70349/234‑1 (MQ=255) gcCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGaa < 1:719010/213‑1 (MQ=255) gacAATAGGGAAGCGATGTTAGTGAGTCTGGGGATTGCCCGCGGTGGCGAGGAGTGGGAGGCAGACGTTGTCGAAAGAGCGCATCTGCTGAGTAAGCTTGAGGTCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTa < 1:836046/237‑1 (MQ=255) gAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTAt < 1:371303/239‑1 (MQ=255) aaGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTTCCTATTTGCTGCAAATGCGGGAACGGTTGTTTGATCTGGCGGCGCGTTATCGGtttttt > 1:683859/1‑236 (MQ=255) aaGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGAGGGATCTGCGTCATCAGGCGTTTCATCCGGCAATTGTGGC‑GGGCTTGGGGTTTCACTATTTTGTGCAAATGCGTGAACGGGTGGTTGAGTTTGGGGCGGGTCATCGATTTAta > 2:424963/1‑238 (MQ=255) gCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGGTGTTTGGTCTGGCGGGGCGTTTTCGATTTTTCTg > 1:480362/1‑239 (MQ=255) gCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGGTGTTCTCCCTATTTTTTGCAAATGCGTGAACGGGTGTTTGTTTGTGCGGGGCGTTGTctgtttttttg > 1:246809/1‑229 (MQ=255) aTGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCCGTGGTTTTCCCCATTTGCTTCAAATGCGTGAACGGTGGTTTGATTTGGCGGGGGGTTTTCCATTTTTCTg > 1:440233/1‑236 (MQ=255) tGTTAGTGAGTCTGGCGAGTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTtgctgc < 1:28015/186‑1 (MQ=255) gggAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTgcggcg < 1:798950/237‑1 (MQ=255) tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTTTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTTGCGGGGCGTTATCGATTTATCTGGCTGCGGGGAACgg > 1:451782/1‑239 (MQ=255) tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGGTCTCCCTCTTTTCTTCAAAAGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTTTCGATTTTTTTGGATTGAGCGAACgg > 1:306554/1‑239 (MQ=255) tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGGGGTTTTCACAATTTGTTGCAAATGGGGGAACGGTTGGTTTATTTTGGGGGGCGTTTTCGGTTTTTTTGGGTTCGGGGAACgg > 1:846013/1‑239 (MQ=255) tCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGGGGGTTTCACTCTTTTCTGCAAATGCGGGCACGGTTGTTTGATCTGGGGGCGCGGTCTTTGTTTTTCTGGCTGGGGGGAACgg > 2:667619/1‑239 (MQ=255) tGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTTCTGCAAATGCGTGAACGGGTGTTTGATCATTCGTGCCGGTATGCATTTATCTGGCTGCGGCGAACGGTg > 1:111748/1‑239 (MQ=255) tGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGGTTTCACTATTTTCTGCAAATGCGTGAACGGGTGTTTGGTCTTGCGCCGCGTTATCCATTTATCTGGCTGCGGCGAACGGt > 1:747949/1‑238 (MQ=255) cggttGCCCGGGGGGGGGGTGGGGGGGGGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGGGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCt < 2:496943/235‑1 (MQ=255) gcgGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTTTGGGTCTCACTATTTTCTGCAAATACGGGAACGGTTGTTTGATCTGGCGGGGCGTTTTCGATTTATCTTGCTTGGGCGAACGGTGCTTTTGGTGGaa > 1:496943/1‑239 (MQ=255) tgttGAGTGGGGGGCCTACGTTCTGGCAAAAGCGAATTTGTTTAGTTAGGTTGAGGCCCGTGACGCCAGCAAGGAAATGCTTGATGAGTTGGATCTGCGTCATCAGGCGTTTCATACGGTAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGATTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTg < 2:725372/235‑1 (MQ=255) cgaggggTGGGAGGGCGACGTACTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAGTGCTTGATGGGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTg < 2:106972/232‑1 (MQ=255) cGATGGGGGGGAGGCAGACGGTCCCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTg < 1:622905/238‑1 (MQ=255) aGTGGGAGGCAGACGTTCCGGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTggagga < 1:174931/238‑1 (MQ=255) tGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTTCTGCAAATGCGGGAACGGTTGTTTGATCTGCCGGCGCGGTTTCGATTTTTTTGGCGTGGGGGAAAGGGGCTTTCGGTGGAAAAACTGGGGGATaa > 1:35154/1‑239 (MQ=255) gAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAac < 1:794303/238‑1 (MQ=255) aGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAaca < 1:176944/238‑1 (MQ=255) ggCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTAtt < 1:506/137‑1 (MQ=255) aggcGTGCTCGAAAAAGCGTGTCTGCTGGGTAGGCTGGAGGCCTGGGACGCCAGCGAGAAAATGCTTGATGAGGGGGATCTGGGTCATGAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGGTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGAt < 2:370587/235‑1 (MQ=255) aGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCGTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGAt < 1:209709/238‑1 (MQ=255) ttgtcGCAAAAGCGCCTTTGCTGGTTAAGCTTTGGGCCTTGGACGCCAGGGAGAAAATGCTTGATGAGGGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCAc < 2:389839/236‑1 (MQ=255) tttccaaaaaGCGCATCTTGTGTGTAATGTTTGGGGCTGTGGGGCCAGTGAAAAAATGCTTGATGAGTGGGATCTGCGTCAACAGGCGTTTCATACGGCAATTGGTGC‑GGGCTGGGGTTCTCCCTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGCTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCAcc < 2:328999/233‑1 (MQ=255) tttgctgAGTAAGCTTGAGGCCTGTGACGGCAGCGAGAAAATGCTTGAGGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTgcgg < 1:773281/237‑1 (MQ=255) aGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTTTCTGGCTGCGGCGAACGGGGGTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAAACCCCGACTTcggggggaat > 1:392925/1‑235 (MQ=255) taaggtttgggCCTGTGACGCCAGGGAGAAAATGCTTGATGGGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTg < 1:792419/229‑1 (MQ=255) tAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGGGCTTTCGGGGGAAATGCTGGAGGGTAAACACGATCAGCACCAGACCCTGCCTTCGCCGGTACttg > 1:602644/1‑237 (MQ=255) aaGCTTGAGGCCTGTGACGCCAGCGAGAAAATGGTTGAGGGGTGGGATCTGGGTCATCAGGCGTTTCAGACGGGAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTAGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGgc < 2:476848/239‑1 (MQ=255) gtcTGTGCAGCCAGCGAAAAAATTCTTGGTGAGGGGGAGCTGCGTCAGTAGGCGTTTCATACGGGAATTGTGGC‑GGTCTTTTGTTCTCACTATTTGCTGCAAATGCGGTAACGGTTGTTTGATCTGGCGGCGCGTTAGCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATa < 2:833533/236‑1 (MQ=255) ggccgctgCGAAAAAATGTTTGGGGGGGGGGTTCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTTTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACcgcgcg < 2:807320/232‑1 (MQ=255) ttGATGAGTGGGCACGGCCTCATCAGGGCTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATTTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc < 1:485505/239‑1 (MQ=255) cttccggCGTTTCATTCGGCAATTGGGGG‑GGGTTTGGGTTCTCACTTTTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAAt < 2:480362/234‑1 (MQ=255) tttCATTCGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGGGTGAACGGTTGTTTGAACTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTa < 1:574569/238‑1 (MQ=255) c‑GGGCTGTGTTTTCCCCTATTTGCTGCAAATGCGTGAACGTTTGTGTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg < 1:686617/238‑1 (MQ=255) ggCTGGGGTTTCCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTAGCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCa < 1:206605/238‑1 (MQ=255) gTTCTCAGTATTTGCAGCAAAGGCGCGAACGGGTGTTTGATGTGGCGGGGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGGGAAAAGGCTGGAGGATAAACACGATCAGCCCCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAacta < 1:136782/239‑1 (MQ=255) | GTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGC‑GGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTA > NC_000913/2795869‑2796339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |