Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,523,993 A→G 14.6% S375G (AGT→GGT)  mrcA → penicillin‑binding protein 1a, murein transglycosylase and transpeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,523,9930AG14.6% 166.6 / 2.9 72S375G (AGT→GGT) mrcApenicillin‑binding protein 1a, murein transglycosylase and transpeptidase
Reads supporting (aligned to +/- strand):  ref base A (27/33);  new base G (9/3);  total (36/36)
Fisher's exact test for biased strand distribution p-value = 1.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CAGCAGGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCAGAGC  >  NC_000913/3523756‑3524223
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       
cagcagGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGAGGCTGGCGGACGGGTCGACCGTCGCCTTGAg                                                                                                                                                                                                                                        >  1:237900/1‑239 (MQ=255)
       ccGCGGAGCAGGCGGTACGTAATAACGGGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATgg                                                                                                                                                                                                                                   <  1:164111/237‑1 (MQ=255)
           gcagaaGGCGGTACGTAATAACGGTCTGGACTAAGACATGCGCCAGGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGGGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCg                                                                                                                                                                                                                             <  1:863769/239‑1 (MQ=255)
                tggCGGTAGGTAATAACGTGTTGGACTACGACATGCCGCCCGGGCATCGCGGGCCGGCAAATGTGCTGTGCAAAGGGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGAAACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGc                                                                                                                                                                                                                        <  2:468315/238‑1 (MQ=255)
                agGCGGTTCGTAATACCGTGCTGGACGACGACAGGCGCCACGGCTAGCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCg                                                                                                                                                                                                                         <  1:130869/238‑1 (MQ=255)
                    ggcaCGTAATAACGTGCTGGACTACCACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTTGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCCCCAGCGCCCATCCTCAGCAAGCGACGCCGAGGCTGGTGGCGGGGGCGGCCGTCGCATTGAGGAGGGAAGGGGttgtggggg                                                                                                                                                                                                                    >  2:577558/4‑232 (MQ=255)
                       aCGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGGCGGGCCGACCGTGGCATTGGCAAGGGAAGGGGTTGGGGGG‑gcgc                                                                                                                                                                                                                >  2:537951/1‑239 (MQ=255)
                       aCGTAATAACGTGCTGGACTACGACATGCGCCAAGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑gcg                                                                                                                                                                                                                 <  1:409090/238‑1 (MQ=255)
                         gTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGCCGGGTCGACCGTCGCCTTGAGTATGGAAGGCGTTCGCTGG‑Gcgcg                                                                                                                                                                                                               >  1:553807/1‑238 (MQ=255)
                             taaCGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGCTACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCCATCCTCAGCAAGCGACGGCGATGCCGGCGGACGGGTCGACCGTCGCATTCAGTAGTGAAGGGGTTGCCTgg‑ggcgggcct                                                                                                                                                                                                           >  1:697172/1‑230 (MQ=255)
                                cGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGCCGGGCATGCTGGCGGACGGGTCGACGGTCGCCTTGAGTATGGAGGGCGTCCGCGGG‑GGGCGGCCTTAcg                                                                                                                                                                                                       >  2:854848/1‑238 (MQ=255)
                                cGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGGCCTTAcc                                                                                                                                                                                                       >  1:474851/1‑239 (MQ=255)
                                cGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAATCACCAGCGCCAATCCTCCGCAAGCGACGGCGGTGCTGGCGGCAGGGGCGAACGGCCCCTTGAGAAGGGAGGGGGGCCGCTGGTGCGCG‑CCTTAcc                                                                                                                                                                                                       >  2:739856/1‑239 (MQ=255)
                                  tGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGCCGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGTATGGAAGGCGTTCCTTGG‑GGCCGTCCTTCCCGt                                                                                                                                                                                                     >  1:227570/1‑239 (MQ=255)
                                  tGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGTATGGAAGGCGTTCGCTGG‑GCCCGTCCTTACCGt                                                                                                                                                                                                     >  1:17239/1‑239 (MQ=255)
                                   gCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGGATGGAAGGCGTTCCCTGG‑GCGCGGCCTTACCGt                                                                                                                                                                                                     >  1:433031/1‑238 (MQ=255)
                                    tggggttACGAAATGCGCCGCGGGTTGCGGGGCCCGGCAAATGTGTTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTCCCGATACGCTGAAGGCGCTGCCAACCTATGGGCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTc                                                                                                                                                                                                   <  2:237900/233‑1 (MQ=255)
                                    cTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGGTAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGGCCGCTGCGGCCTGCCGCAGTCCCCAGCGCCAATCCCCACCGAGCGACGGCGCTGCGGTCGGGCGGCTCACCCGGCGCACTGGGGTCGGAACGCGGCCGCTGG‑GCGCGCCCCTACCGtgt                                                                                                                                                                                                   >  2:715715/1‑237 (MQ=255)
                                     tGGACTTAGAAATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGGGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTc                                                                                                                                                                                                   <  1:556067/238‑1 (MQ=255)
                                     tGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCg                                                                                                                                                                                                  <  1:7972/239‑1 (MQ=255)
                                           aCGACATGCGCCACGGCTAACGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACt                                                                                                                                                                                            <  1:856642/239‑1 (MQ=255)
                                            cGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCCATCCTCAGCAAGCGACGGCGATGCTGGCGGCCGGGTCTACCGTCGCCTTGGGAGTGGAAGGCGTTCGCCGG‑GGGCGTCCTTACCGGTCGGGAACTc                                                                                                                                                                                           >  2:774255/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGCTGCTGGCGGACGGGTCGCCCGTCGCATTGAGAAAGGAAGGCGTCCGCCGG‑CCGCGCCCTTACCGTTCGGATACCCACCaa                                                                                                                                                                                      >  2:62985/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGATGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTTG‑GCGCGTCCTTACCGTTCGGATACTCaccca                                                                                                                                                                                      >  1:440803/1‑235 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCaa                                                                                                                                                                                      >  1:625510/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCCCGTCCTTACCGTTCGGATACTCAGCaa                                                                                                                                                                                      >  1:791164/1‑239 (MQ=255)
                                                 tGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGAAACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGGCGGCCGGCCCATTGGGTCTGGAAGGCGGTAGCCGG‑GCCCGGCCTTACCGCCCGGaatccaagcaa                                                                                                                                                                                      >  2:540296/1‑229 (MQ=255)
                                                           cTATCGCGGCCCGGAAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGAcg                                                                                                                                                                             <  1:887127/238‑1 (MQ=255)
                                                                   gCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTAGCTGG‑GCCCGTCCTTACCGTTCGGATACTCAGCAAGGCCCGCCGCCGCGTaaa                                                                                                                                                                    >  1:178938/1‑239 (MQ=255)
                                                                   gCCCGGCAAATGTGCTGTGGAAAGTGGACGAGTCGGCGTGGGATAACAACCAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGTCGATGCTGGGGGCACGGTCGACCGGCGCATTGGGTATGGAAGGCGTTCTCTGG‑CCGCGGCCTTACCCGTCGGCAACCCAACAAGGGCCGaagggggcgaaa                                                                                                                                                                    >  2:879196/1‑228 (MQ=255)
                                                                                 cTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGAATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCTGAAAGGGACCGCTGt                                                                                                                                                         >  1:415987/1‑236 (MQ=255)
                                                                                  tgtgGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCCCGTAAAGTGACCGAGGtctt                                                                                                                                                      >  1:694734/1‑235 (MQ=255)
                                                                                               cGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAg                                                                                                                                         <  1:672889/238‑1 (MQ=255)
                                                                                                    cgggttGGGATAACAAAAAGTTTCCCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCGGCCGCAGGCACCAGCGCCAAGCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAAt                                                                                                                                    <  2:276526/233‑1 (MQ=255)
                                                                                                                     aaGATTACCGATCCGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGAGCGCGATGCCGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTgg                                                                                                                  <  1:858796/239‑1 (MQ=255)
                                                                                                                      aGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGAGACTCAGCAAGGACCGACGGCGCGTAAAGTGACCGATTTTCTGCAAACGGGGCCACAAATCTGGGTGCGACCGGGTggg                                                                                                                 >  2:401611/1‑238 (MQ=255)
                                                                                                                      aGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCCCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGGAAAGGGACCAAGGTTTTGCAAACGGGTCAGAAAAACGGGGTTCGACGGGGTggg                                                                                                                 >  2:826970/1‑238 (MQ=255)
                                                                                                                        aTTACCGATACGCTGAAGGCGCTGCCAACCTATGGGCCGCTGCGGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGa                                                                                                               <  1:112425/239‑1 (MQ=255)
                                                                                                                          tACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGt                                                                                                                                            >  2:86586/1‑208 (MQ=255)
                                                                                                                          tACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGt                                                                                                                                            <  1:86586/208‑1 (MQ=255)
                                                                                                                              gATACGCTGAAGGCGCGTCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGGGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtg                                                                                                         <  1:630239/239‑1 (MQ=255)
                                                                                                                              cttccccTGACGGGGCTGCCAACCTTTGGGCCGCGGCTGCCTGCCGCAGTCCCCGGCGCCAATCCCCAGCAAGTGACGGCGATGCTGGCGGCCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtg                                                                                                         <  2:301616/233‑1 (MQ=255)
                                                                                                                               aTACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCTCTGG‑GCGCGGCCTTTCCGTTCGGTCACTCAGGCAGGACCTGCGCCGCGGAAAGTGTCCACTGCTCGGCAAACCGGGCCACAAATTCGGGGGCGACAGGTTgggggtggcatg                                                                                                        >  2:833484/1‑229 (MQ=255)
                                                                                                                                 ccGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCCCCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtggtg                                                                                                      <  1:584342/238‑1 (MQ=255)
                                                                                                                                  cGCTTAGGGGGCTGCCCCCCTATGGTCCGCTGCGGCCCGGCGCAGTCCCCAGCGCCAATCCCCAGCAAGCGACGGCGATGCTGGCGGCCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCAtggtgg                                                                                                     <  2:625510/239‑1 (MQ=255)
                                                                                                                                     ggAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGGAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGtggct                                                                                                   <  1:14787/237‑1 (MQ=255)
                                                                                                                                       aaGGCGCTGCGAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGGGTTTGGAAGGCGTTCGCTGG‑GCGCGGCCTTACCGTTCGGTTACTCAGCAACGCCCGCCTCCGCGTAAAGGGACAGACGTACTGCCAACGGTGGCGCAAATCTGGGGTCGCCAGGTTGGCCATGCAtgggggggggc                                                                                                >  2:607312/1‑234 (MQ=255)
                                                                                                                                           cgcgGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGcaca                                                                                             <  1:778982/238‑1 (MQ=255)
                                                                                                                                                          gTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTGTGGAAGGGGTTCGCTGG‑GCGCGTCCTTACCCTTCGGGTACTCAGCAAGGACCGACGCCCCGTAAATTGACCGAGGTTCTGCAAACGGGTCACCAATCCTGGGTTCGCCAGCTTGGCGCTGAATGGGGGCTGGGCCAAGGGCgggggagaagc                                                                             >  2:213736/1‑231 (MQ=255)
                                                                                                                                                          gTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCCAATCTGGGTTCGTCAGGGTGGCGATGGCTGGGGGCTGGCAAAAGTGCCGGAAGGGAAc                                                                             >  2:199985/1‑239 (MQ=255)
                                                                                                                                                            ccGCTGGCGCCTGGCGGAGTCACCAGCGTCAATCCTCAGCAAGCGGCGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACt                                                                            <  1:888086/238‑1 (MQ=255)
                                                                                                                                                             cGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGGATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGAGACTCAGCAAGGACCGACGCCGCGTAAAGGGACCGATGTTCTGCAAACGGGTCAGTCAATCTGGGGCCGTCAGGTTGGCGATGCATGGTGGCTGGACCAAATGCCGGAAGTGAAATca                                                                          >  2:54227/1‑238 (MQ=255)
                                                                                                                                                              cttggtccctgccGCTGTCACCAGCGCCAATCCTTAGACAGGGACGGGGATGCTGGCGGACGGGGCGACCGTCGCATTGAGTATGGAAGGCGTGCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCgg                                                                         <  2:433031/232‑1 (MQ=255)
                                                                                                                                                               ctgctgCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGCCGCCGCGTAAAGGGACCGATGTTCTGCAAACGGGTCAGCAAACCTGGGTTCGTCAGGATGGGGCGGCATGGGGGCTGCAACAAAATCCGGAAGGAAACTCggg                                                                        >  2:31988/1‑238 (MQ=255)
                                                                                                                                                               ctgctgCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGTCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACCCGgc                                                                        >  1:672837/1‑239 (MQ=255)
                                                                                                                                                                 tctgccggcCGGCTTCCCCAGGGCAAATCCTGCGGAAGCGGCGGGGGTGCTGGGGGACGGGGCGACCGTCGCATTGAGTATGGAAGGCGTTCGGTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTTAGCAAATCTGGGTTCATCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGgcgc                                                                      <  2:798507/238‑1 (MQ=255)
                                                                                                                                                                 gctgcCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAg                                                                                                                       <  1:718241/190‑1 (MQ=255)
                                                                                                                                                                 gctgcCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGGGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAg                                                                                                                       >  2:718241/1‑190 (MQ=255)
                                                                                                                                                                 gctgcCTGCCGCAGGCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTTGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGgcgc                                                                      <  1:526197/239‑1 (MQ=255)
                                                                                                                                                                   tgcctgccGCAGTCACCAGCCCCAATCCTCAGCAGGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTg                                                                    <  1:616813/239‑1 (MQ=255)
                                                                                                                                                                          cGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCGGGCACAAGGGCCGGAAGTGAACTGGGCGCTGGGGTCgt                                                             >  1:519968/1‑238 (MQ=255)
                                                                                                                                                                             aatccccAGCGCCAATCCGCAACAAGGTGCGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCa                                                          <  1:540296/234‑1 (MQ=255)
                                                                                                                                                                                       gcCAATCCTCAGCAAGCGACGGCGATGCTGGCGGGCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCaaaa                                                <  1:66021/239‑1 (MQ=255)
                                                                                                                                                                                          aaTCCTACGCAAGGCGCGGCGGTGCCGGCGGACGGTTCGGCCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACgg                                             <  1:318871/239‑1 (MQ=255)
                                                                                                                                                                                                 aGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCCAAACGGTGCCGtt                                      >  1:726627/1‑239 (MQ=255)
                                                                                                                                                                                                  gCAAGCGACGGCGATGCTGGCGGGCGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTa                                     <  1:537951/239‑1 (MQ=255)
                                                                                                                                                                                                                     gggggcGGGTCGCCCTTCGCATGTGGTTTGGAGGGCGTTCTGCGG‑GCGCTTCCTTACCGTTCGGTTCCTCAGCAAGGACCGACGCCGGGTAAAGTGACCGATTTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCtt                  <  2:672837/234‑1 (MQ=255)
                                                                                                                                                                                                                      gggACGGGGCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCtt                  <  1:774255/237‑1 (MQ=255)
                                                                                                                                                                                                                      cGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCtt                  <  1:854848/238‑1 (MQ=255)
                                                                                                                                                                                                                                   cggtgCATTGGGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCaga    <  1:401611/235‑1 (MQ=255)
                                                                                                                                                                                                                                   cGTCGCATTGGGTAGGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCaga    <  2:474851/239‑1 (MQ=255)
                                                                                                                                                                                                                                     tCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGTTCAATCCGCAAAACGGTGCCGTTATGGCGCTGGCCGGTGGCGTTGATTTCaacaaaaga  >  2:748215/1‑232 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       
CAGCAGGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGG‑GCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCAGAGC  >  NC_000913/3523756‑3524223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑