New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207779	13 (0.260)	4 (0.080) +TTCGAAAACC	4/394	NT	37.5%	coding (279/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	= 1209618	1 (0.020)					pseudogene (2/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTA  >  NC_000913/1207568‑1208006                                                                                                                                                                                                                      |                                                                                                                                                                                                                                    gTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCCCTTC‑GCGCGCTGCTGT‑TAAGCCGCACGAAGCCGTTTGGCGATATCAAATGGGAAGGCACCGGGCAAACGGCGCCTGAAAACCTTGGT                                                                                                                                                                                                                      >  2:2615‑M1/1‑227 (MQ=255)   ggTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTGGCCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                                                                                                     >  1:412482‑M1/1‑226 (MQ=255)        ccccaAGACCGGCACGCCTGCCAGCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACGTTGCAGCGTGGTGGAGGCATCCGGTGGCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGA                                                                                                                                                                                                              <  1:433517‑M1/228‑1 (MQ=255)            cAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGCTTGGGAGAAGGc                                                                                                                                                                                                          >  1:447517‑M1/1‑227 (MQ=255)              gcacggcACGCCTGCCGGCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctc                                                                                                                                                                                                        <  1:326001‑M1/225‑4 (MQ=255)                   gCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGGGAAGGctctccat                                                                                                                                                                                                   >  1:527853‑M1/1‑220 (MQ=255)                       gCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                                                                                                                                               <  1:148679‑M1/228‑13 (MQ=255)                         cTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGGAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGGGCTGCTGT‑TAAGCCGCAAGAATCCGCTTGGCGATATCCAATCGGCGGGCCCTGTGCAAACGGCTCTCGGAGACCTTGGTTGGGGGGAAGGcccggcattaccgt                                                                                                                                                                                             >  2:93476‑M1/1‑214 (MQ=255)                               ccGATCTGGATGATGCCTACTTGGAAATGTTGAAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                        <  1:105374/227‑1 (MQ=255)                                  aTCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGTGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGAGGGCACTGTGCAAACGGCTttcgaaaaccttggtttgggagaaggctctgcattacctgttggtgtc                                                                                                                                                                                     >  1:21647‑M1/1‑179 (MQ=255)                                   tCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGTGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCGGCGTT‑TAAGCCGCAAGAATCCGTTTGGCGGTATCAAATCCGATGGCACTGGGACAACGGCTCCCGCAACCTTTGGTTTGGCAGAAGGACCAAAACCCAATGAAGCAAAGGc                                                                                                                                                                                   >  2:225479/1‑228 (MQ=17)                                   tCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGTCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGCTATCAAACCGGATGGCACTGGGCAAACGGCCCTCGAAAACCTTGGTTTGGGAGAGGGcccggccttccctgttggggtc                                                                                                                                                                                     >  2:331643‑M1/1‑204 (MQ=255)                                            tgaCTAATTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCTCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGCTCTCACATCGGCTGGCACTGTGCAAACGGATCTCGAAAACACTGGTTTGGGGGAAGGatatcccttaccggttggcgccccggttccgc                                                                                                                                                                           >  2:582982‑M1/1‑195 (MQ=255)                                                 actTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCa                                                                                                                                                                     >  1:558544/1‑228 (MQ=255)                                                  ctTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                                                                                                                                                    >  2:504111‑M1/1‑189 (MQ=255)                                                    ttggcctGTTGCAGGGGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTTGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAcc                                                                                                                                                                   <  1:2615/221‑1 (MQ=255)                                                     tGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGAAAGGctcggcattacccggtggtggcccggttccgtggccttcagc                                                                                                                                                                 >  2:440880‑M1/1‑186 (MQ=255)                                                           gTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                                                                                            <  1:218698/227‑1 (MQ=255)                                                            ttGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATCGCCCTGTCCAAACGGCTCGCGAAACCCTTGGTTTGGGAGAAGGctctgcattaccggttggggtcccggttcccgggccttccgccattccc                                                                                                                                                          >  2:149177‑M1/1‑179 (MQ=255)                                                                  gaggaACTTCGCAGCGGCGTGGAGGCATCAGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTAATTACCGCACTTC‑GCGCGCTGATGT‑TAAGCCGCAAGAATCCGTTTGGCGGTTACAAATCGGATGGCACTGTGCAAACGGCTCCCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATCCGGCAACGGCTACATTAGGACGACCCGGTGTCCAATCtata                                                                                                                                                    >  2:514628/1‑228 (MQ=18)                                                                        ttttgCAGCGTGGTGGAGGCTTCCGGTGTCAGCCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGGTGCGGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                                                                                              <  2:183950‑M1/227‑62 (MQ=255)                                                                           ggcAGCGGGGGGTGGGCATCCGGTGCCAGCCTGGAGAGGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg                                                                                                                                           <  2:646862‑M1/227‑65 (MQ=255)                                                                                cGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgccttacctgttggtgtcccggttccgtggccttcagcccccccgccaccaggctggcggaaaa                                                                                                                                       >  2:82633‑M1/1‑159 (MQ=255)                                                                                  tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctctgcattacctgttggtgtcccggttcctgggccttagcccccccgcccaacaggctggctgaaatgca                                                                                                                                    >  2:392755‑M1/1‑157 (MQ=255)                                                                                  tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATttgtg                                                                                                                                    >  1:469137/1‑228 (MQ=255)                                                                                      gggggCATCCGGTGCCGGGCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTGC‑GCGGGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                <  1:197705/225‑1 (MQ=255)                                                                                       ggggctcccggtggcaGCCTGGAGAAGGGGCGGCCTGCCCGGTTTCTTCCCCGACGTCAGCGCG‑TGCTGT‑TAAGCCGCAAATATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt                                                                                                                               <  2:21647‑M1/221‑77 (MQ=255)                                                                                            aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggcgggctgaaatgccatggtgccgc                                                                                                                          >  2:188955‑M1/1‑147 (MQ=255)                                                                                            aTCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                                                                                           >  1:229355‑M1/1‑147 (MQ=255)                                                                                             tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGc                                                                                                                                                                                                          <  2:229355‑M1/147‑2 (MQ=255)                                                                                                     cAGCCTGGAGGAGGGGGGGCCCGAACAGTTACCTTCCCCACTTG‑GGGGGCTGTTGT‑TAAGCCGCAATAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                                                                                  <  2:558544/227‑1 (MQ=37)                                                                                                        ccTGGAGAATGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGccctgcattcactgttgggttcccggtcccttggccttcagccaccccgcaaacagactggcggcaatgcaatggggcccgtttttttgctc                                                                                                               >  2:187303‑M1/1‑135 (MQ=255)                                                                                                         cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                                                                             <  1:504111‑M1/228‑95 (MQ=255)                                                                                                               agggggcgGCGCG‑CCGGTTCCTTACCGAACTTC‑GCGCG‑TGTGGTATAAGCCGCAAGGATACGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacc                                                                                                      <  2:372428‑M1/226‑102 (MQ=255)                                                                                                                     gggccCGGCCAGTTCCTTCCGCCACTTC‑GCGCGTTGCTGT‑TAAGCCGAAAGATTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTttcgaaaaccttggtttgggagaaggctctgcattaccttttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                                                                                 <  1:392755‑M1/227‑133 (MQ=255)                                                                                                                          cggtcagttCCTTACCGCACTTC‑GCTCGCTGCGGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggc                                                                                            <  1:555097‑M1/224‑112 (MQ=255)                                                                                                                           gACCTGTTACTTACCGCTCTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggc                                                                                            <  1:561105‑M1/227‑112 (MQ=255)                                                                                                                                     tttccggaCTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGAAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcctctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttat                                                                                  <  1:387859‑M1/224‑122 (MQ=255)                                                                                                                                      tacCGCACTTC‑CCGCGCTGCTGG‑TAAGCCGTAAGAAACCGTTTGGCGATATCAAATCGGATGGAACTGGGCAAACGGCTCGCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCTTTCAGTGGGGGTGGAATGCCGCAAAAGCATc                                                                                <  1:225479/228‑1 (MQ=255)                                                                                                                                       acCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgatttttctgctgaagaatacccggaactggcaaaggcttatcc                                                                                >  1:550554‑M1/1‑104 (MQ=255)                                                                                                                                       acCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggggtcccggttccgtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatcc                                                                                >  1:440327‑M1/1‑104 (MQ=255)                                                                                                                                               tC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTAGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaccggctggctgaaatgcaatggggccgctttttcttctgcagaatacacggacctggccaaggcgtctccgagaaataa                                                                       >  2:80893‑M1/1‑96 (MQ=255)                                                                                                                                               tC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCAGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcacggttccgtggccttcagcaactccgcaaacagtctgggttaaatgcactggtgccgctttttctgctgaggaataccgggcacctgcaaaggcttctccgcgaaacaa                                                                       >  2:80902‑M1/1‑96 (MQ=255)                                                                                                                                                c‑gcgcgCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaa                                                                      <  1:349285‑M1/228‑134 (MQ=255)                                                                                                                                                           tgT‑TAAGCCGCAAGAATCCGTTTGGCGATAACAAAGCGGATGGCAGTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatt                                                            <  2:25639‑M1/228‑144 (MQ=255)                                                                                                                                                             ttgaaGCCGGAAAAACCCGGTTGGCGATATCAAATCGGAAGGACCTGTGGAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGaaa                                                           <  2:469137/225‑1 (MQ=255)                                                                                                                                                                  gCCGCAAGAATCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTttcgaaaaccttggtttgggagaaggctctgcattccctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtg                                                      <  1:343186‑M1/228‑176 (MQ=255)                                                                                                                                                                   ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaaaacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtgg                                                     >  2:415275‑M1/1‑78 (MQ=255)                                                                                                                                                                    cgaaagaaCCCGTTGGGCGATATCAAAGCGGATGGCACTGAGAAAACGGCTttcgaaaaccttggtttgggagaaggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggt                                                    <  2:8750‑M1/225‑178 (MQ=255)                                                                                                                                                                     gaaagaATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggt                                                    <  1:82633‑M1/225‑152 (MQ=255)                                                                                                                                                                     gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggggccgctttttctgctgcagaatacccggaactggcacaggcttatccgaccaataaattgcctgctttacgggggg                                                   >  2:84709‑M1/1‑76 (MQ=255)                                                                                                                                                                      cAAGAACCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGt                                                  <  1:40115/228‑1 (MQ=255)                                                                                                                                                                                tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGtt                                        <  1:521573/228‑1 (MQ=255)                                                                                                                                                                                                   aTGGCCCTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgg                      <  1:331643‑M1/227‑182 (MQ=255)                                                                                                                                                                                                   aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgg                      <  1:415275‑M1/227‑182 (MQ=255)                                                                                                                                                                                                   aTGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgg                      <  1:333796‑M1/227‑182 (MQ=255)                                                                                                                                                                                                            tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcactggcaaaggcttatccgccaaataaattgcctgatttacgtggtgagtttcttcgtggctgggatgacgggcgggggattgata            >  1:234931‑M1/1‑37 (MQ=255)                                                                                                                                                                                                            tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgcaatgcaatggtgccgctttttctgctgaagaatccccggaactggcaaaggcttttccgacaaataaattgcctgatttacgtggtgagtgtattcggggctgggatgacggacgggggattgctc            >  1:47721‑M1/1‑37 (MQ=255)                                                                                                                                                                                                            tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggccaaggcttatccgacaaataaattgcctgatttacgtggggagtttattcgtgactggggtgacgggagggggtttgata            >  2:18793‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                 aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacggccgggggattgatacagac       >  1:80993‑M1/1‑32 (MQ=255)                                                                                                                                                                                                                     ctctCGAAAACCTTGGTTTGGGAGAAGGctctgcatgacctgtgggtgtcccggttccgtggccttcagccactcctgcaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgct   <  1:483640‑M1/228‑201 (MQ=255)                                                                                                                                                                                                                      tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggcttgatacaggtcgccc  >  1:464899‑M1/1‑27 (MQ=255)                                                                                                                                                                                                                      tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataaccggaactggcaaaggcttatccgacaaataaattgcctgacttcaggggtgagtttattcgtggctgggatgacgggcgggggattgatcaaggacccgc  >  1:459219‑M1/1‑27 (MQ=255)                                                                                                                                                                                                                      |                                                                                                                                                                                                                                    GTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTA  >  NC_000913/1207568‑1208006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.