New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780513 (0.260)41 (0.890) 32/382 NT 86.3% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 1 (0.020)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

ACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGC  >  NC_000913/1209382‑1209829
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                   
tcccctGAATCATGAAAAAAGAGCCACCTTTATCAATCCCCCCCCCGTCATCCCAGCCACGAATAAACTCCCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                                                                                                              >  2:30027‑M2/2‑221 (MQ=255)
  cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATACGCATTTGCCAGTTCCGGGCATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGG‑CGTCATGCCTGCAAGCCACGGAACCGGGAAACAAAACGGTAATTCAGAGcctcatccc                                                                                                                                                                                                                            <  1:582982‑M2/228‑10 (MQ=255)
  cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGCAGTCCCCGGAACCGGGACACCAACAGTCAATGCACAGacttcgccc                                                                                                                                                                                                                            <  1:301699‑M2/228‑10 (MQ=255)
     tGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGCATTCTTCAGCAGAAAAATCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTAGCTGAAGGCCACGGAACCGGGCCACCAACAGGTAATCCAGGGccttctcccaaa                                                                                                                                                                                                                         <  1:188955‑M2/228‑13 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATACACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGATCCGGGTATTCTTCAGCAGAAAAAGCGGCACCCTTGCATTTCAGCCAGCCTGTTGT‑CGGAGTGGCTGAACGACACGGAACCCGGAACCCAACAGGTAATACAGACcctttcaccaaaccaaggt                                                                                                                                                                                                                  <  2:459219‑M2/228‑20 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAAAGccttctcccaaaccaaggt                                                                                                                                                                                                                  <  1:587815‑M2/228‑20 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCACCGGAACCGGGACACCACCAGGTAAGGCAGAGccttttcccaaaccaaggt                                                                                                                                                                                                                  <  2:440327‑M2/228‑20 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCAACGGAACCGGGCCACCAACAGGTAATGCAGAGccttctcccaaaccaaggt                                                                                                                                                                                                                  <  1:412492‑M2/228‑20 (MQ=255)
                    gggcgACCTGTATCAAGCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  1:464899‑M2/3‑201 (MQ=255)
                    gcgggtccttgatcaatcccccgCCCGTCATCCCAGCCACGAATAAACTCACCCCTGAAGTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGTTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  1:459219‑M2/12‑201 (MQ=255)
                     agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGGAATGCCGAGccttctcccaaaccaagggtttcggaaa                                                                                                                                                                                                         <  2:447517‑M2/228‑29 (MQ=255)
                     agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGC‑AGGAGTGGCTGAAGGCCACGGAACCGGGACACCCACAGGTCATGCAGAGccttctcccaaaccaaggttttcgagag                                                                                                                                                                                                         <  1:483640‑M2/228‑29 (MQ=255)
                      gCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttgtcccaaaccaaggttttcagaggc                                                                                                                                                                                                        <  1:440880‑M2/228‑30 (MQ=255)
                         gtctgTATCAATCCCCCGGCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                     >  1:80993‑M2/3‑196 (MQ=255)
                              tATCAATCCCCCGCCCGTCATCCCAGCCACGAAGAAACTCACCACGTAAATCAGGCAATTTATTTGGCGGATAAGCCTTTGCCAGTGCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  1:234931‑M2/1‑191 (MQ=255)
                              tATCAAACCCCCTCCCGTCACCCCAGTCACGAATAAACTCCCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTGGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:18793‑M2/1‑191 (MQ=255)
                              gagcaatCCCCCGTCCGTCATCCCAGCCCCGAATACACTCACCACGTAAATCAGGCAATTTATTTGTCGGAAAAGCCTTTGCCAGTTCCGGGGATTCTTCAGCAGAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  1:47721‑M2/4‑191 (MQ=255)
                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagtgccat                                                                                                                                                                                       <  1:333796‑M2/227‑47 (MQ=255)
                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagggccat                                                                                                                                                                                       <  1:331643‑M2/227‑47 (MQ=255)
                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccat                                                                                                                                                                                       <  1:415275‑M2/227‑47 (MQ=255)
                                                                     ccccccgtAAAGCAGGCAATTTATTGGTCGGATAAGCCTGTGCCAGTTCCGGGTATTCTGCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGGTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                         >  2:84709‑M2/3‑152 (MQ=255)
                                                                      accacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctttc                                                                                                                                                         <  1:82633‑M2/227‑77 (MQ=255)
                                                                      accacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAggttttcgaaagccgttttctcagtgccatccgctttgatatcgcccaacgggttctttcg                                                                                                                                                        <  2:8750‑M2/228‑62 (MQ=255)
                                                                       ccacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTTTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcgg                                                                                                                                                       >  2:415275‑M2/1‑150 (MQ=255)
                                                                        cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGCCTTCTCCCAAACCAAggttttcgaaagccgtttgcacagtgccatccgatttgctatcgccaaacggattcttgcggc                                                                                                                                                      <  1:343186‑M2/228‑64 (MQ=255)
                                                                              aaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacactgccatccgctttgttatcgccaaacggattcttgcggcttaaca                                                                                                                                                <  2:25639‑M2/228‑86 (MQ=255)
                                                                                        tttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccctccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcg                                                                                                                                      <  1:349285‑M2/228‑96 (MQ=255)
                                                                                         ttgtttcgcggagaagcCTTTGCAGGTGCCCGGTATTCCTCAGCAGAAAAAGCGGCACCAGTGCATTTAACCCAGACTGTTTG‑CGGAGTTGCTGAAGGCCACGGAACCGTGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaagctgattcttgcggcttaacagcagcgcgcga                                                                                                                                     >  2:80902‑M2/9‑132 (MQ=255)
                                                                                         ttatttCTCGGAGACGCCTTGGCCAGGTCCGTGTATTCTGCAGAAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCGGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgctaaacggattcttgcggcttaacagcagcgcgcga                                                                                                                                     >  2:80893‑M2/1‑132 (MQ=255)
                                                                                                  ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAATCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                             >  1:550554‑M2/1‑123 (MQ=255)
                                                                                                  ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGGGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                             >  1:440327‑M2/1‑123 (MQ=255)
                                                                                                    aTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGAGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttttcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtccggaaa                                                                                                                           <  1:387859‑M2/227‑107 (MQ=255)
                                                                                                             tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcct                                                                                                                                                                                                                                  <  2:168497‑M2/115‑4 (MQ=255)
                                                                                                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaccgcagcgagcgaagtgcggtaaggaactgaccg                                                                                                                <  1:555097‑M2/228‑118 (MQ=255)
                                                                                                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagagcggtaagtaacaggtc                                                                                                                 <  1:561105‑M2/227‑117 (MQ=255)
                                                                                                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctt                                                                                                                                                                                                                                 >  1:168497‑M2/1‑111 (MQ=255)
                                                                                                                   ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAAAAGGTAATGCAGAGCCTTCTCCCAAACCAAggttttcgaaagccgtttgcacagtgccatccgatttgatatcgccaaacggaatctttcggcttaacagcaacgcgcgaagtggcggaaggaactggccgggccc                                                                                                           <  1:392755‑M2/228‑107 (MQ=255)
                                                                                                                      cGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATGTTAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                        <  1:95710/228‑1 (MQ=255)
                                                                                                                        ggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgtatccttgcggcttataccacacgcgcgaagttcggtaaggaaccggcgcgccgccccct                                                                                                      <  2:372428‑M2/228‑128 (MQ=255)
                                                                                                                               ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccag                                                                                               <  1:504111‑M2/228‑135 (MQ=255)
                                                                                                                                 gagcaaaAAAACGGGCCCCATTGCATTGCCGCCAGTCTGTTTG‑CGGGGTGGCTGAAGGCCAAGGGACCGGGAACCCAACAGTGAATGCAGGGccttctcccaaaccaaggttttcgagagccgtttgcacagggccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccattctccagg                                                                                              >  2:187303‑M2/2‑92 (MQ=255)
                                                                                                                                            gCGGCACCATGGCATTTCAGCCCGCCTGGTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccggttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggat                                                                                  >  2:188955‑M2/1‑81 (MQ=255)
                                                                                                                                                 aCCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggatatttgcggcttaacagcacgcgctgacgtcggggaagaaaccgggcaggccgccccttctccaggctgccaccgggagcccc                                                                             <  2:21647‑M2/228‑153 (MQ=255)
                                                                                                                                                      tGCATTTCAGCCAGCCTGTTGGGCGGGGGGGCT‑AAGGCCCAGGAACCGGGACACCAACAGGTAATGCAGAGccttcccccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                        >  2:392755‑M2/1‑71 (MQ=255)
                                                                                                                                                         ttttcCGCCAGCCTGGTGG‑CGGGGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAGGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacg                                                                      >  2:82633‑M2/2‑68 (MQ=255)
                                                                                                                                                             cagccagcCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccctctccaggctggcaccggatgcccaccccccgctgcc                                                                 <  2:646862‑M2/228‑165 (MQ=255)
                                                                                                                                                                ccagccTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaccgcaccgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcccggctgacaccggaagcctccaccacgctgcaaaa                                                              <  2:183950‑M2/228‑168 (MQ=255)
                                                                                                                                                                             gggaATGGCGGAAGGCCCGGGAACCGGGACCCCAACCGGTAATGCAGAGccttctcccaaaccaagggtttcgcgagccgtttggacagggcgatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaa                                                  >  2:149177‑M2/2‑49 (MQ=255)
                                                                                                                                                                                    gCTGAAGGCCACGGAACCGGGCCACCACCGGGTAATGCCGAGcctttccccaaaccaaggttttcgagagccgtttgcacagtgccctccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtca                                           >  2:440880‑M2/1‑42 (MQ=255)
                                                                                                                                                                                       gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaag                                        >  2:504111‑M2/1‑39 (MQ=255)
                                                                                                                                                                                              gcgGAACCGGGGCGCCAACCGGTAAGGGATATccttcccccaaaccagtgttttcgagatccgtttgcacagtgccagccgatgtgagagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgaggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaattagtca                                  >  2:582982‑M2/2‑32 (MQ=255)
                                                                                                                                                                                                        gACCCCAACAGGGAAGGCCGGGccctctcccaaaccaaggttttcgagggccgtttgcccagtgccatccggtttgatagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgacccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccaga                         >  2:331643‑M2/1‑22 (MQ=255)
                                                                                                                                                                                                        gACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAggttttcgaaagccgtttgcacagtgccctccgatttgatagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttcaccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagat                        >  1:21647‑M2/1‑38 (MQ=255)
                                                                                                                                                                                                                acggtaATGCCGGGccttccccccaaccaaggtctccgagagccgtttgcacagggcccgccgattggatatcgccaagcggattcttgcggcttaacagcagcccgcgaagtgcggtaagtaactggtcgtgccgcccctcctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcag               >  2:93476‑M2/3‑14 (MQ=255)
                                                                                                                                                                                                                  ggTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggc             <  1:148679‑M2/228‑217 (MQ=255)
                                                                                                                                                                                                                      aTGGAGAGccttcccccaaaccaaggttttcgagcgccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgc         >  1:527853‑M2/1‑8 (MQ=255)
                                                                                                                                                                                                                           gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcgccggcaggcgtgccgtgc    <  1:326001‑M2/228‑226 (MQ=255)
                                                                                                                                                                                                                             gccttctcccaagccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctg  >  1:447517‑M2/1‑1 (MQ=255)
                                                                                                                                                                                                                             gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgga                                                                                   <  2:229355‑M2/147‑147 (MQ=255)
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                   
ACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGG‑CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGC  >  NC_000913/1209382‑1209829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.