| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,875,269 | T→G | 18.5% | T51P (ACC→CCC) | cysN ← | sulfate adenylyltransferase, subunit 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,875,269 | 0 | T | G | 18.5% | 119.2 / 2.5 | 63 | T51P (ACC→CCC) | cysN | sulfate adenylyltransferase, subunit 1 |
| Reads supporting (aligned to +/- strand): ref base T (16/32); new base G (13/2); total (29/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTGGTCGCGGTCAATCACGCGGCCCTGACGTTCA > NC_000913/2875048‑2875496 | cATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTg < 2:248806/228‑1 (MQ=255) gggtgttacgCTCGGGCCCTGGGGTGTCGGGGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAga < 1:150681/218‑1 (MQ=255) gggTGTATCGCCCGGGCACTGGGGTGTCGGCTGTAATAAATTTACGCTTCGCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgcagca < 1:290159/225‑1 (MQ=255) gtgtACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCCGCAgacga > 1:440305/1‑228 (MQ=255) gtgtACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGTGACGCAgccgg > 1:55207/1‑227 (MQ=255) cTCCTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCAACGTCAATGGTGATGCCCTGTTCGCGCACAGCTTGCCGGCCGTCAACCAGCAGAGCCAGACCCAGCTTTTCGCCCTGGGAGCCGGGACCATTATTGTCGTATTCTAGCGATCAGACCTGACCTTCGCAGATTAGCCGGGGATCGTTCGGCAggcgaacccaaca > 2:510627/1‑220 (MQ=255) gCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTTGCGGGGAACGTGCAGCACAAGACCAAACaaaaaaa > 2:94296/1‑222 (MQ=255) gCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGGGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGTTCGTGCAGCAGACGGCACATCAGAGGAc > 2:381005/1‑228 (MQ=255) tCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGGGCCACACACGAACAATACGAATACtttttctcgtc > 2:557422/1‑221 (MQ=255) ggggATAATAAATTTCCGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATc < 1:59702/225‑1 (MQ=255) ggCGTTTATAAATTTCCGCTGCCGGGTAGAGAAAGTGCGGTGGGCCCCGTCAAGGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTGCTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATc < 2:123377/228‑1 (MQ=255) ggCGATAATTAATTTCCCCTTCTCGGTAGAGAAAGTGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATc < 2:440305/228‑1 (MQ=255) ggCGATAATCAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATc < 1:403031/228‑1 (MQ=255) gggATAATTAATGTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTTCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATGTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATc < 1:110139/225‑1 (MQ=255) gCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTGAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATc < 1:260694/227‑1 (MQ=255) tggggaggaaaaTCGCGGTAGGCCACGTCAAAGGGGATGCCCTGTTCGCGCCCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGaaaa < 2:469719/219‑1 (MQ=255) agaAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTAATTTTGCCGTCATCGACGCTACCCCAGGCCCGCAAACgcagaa > 1:271937/1‑226 (MQ=255) aaaTAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGTGCAGCAGACGACCAATCAGAGTACTTTTTCCGTCATCGGCGCTACCACAGGTCAGAAAACGCCGCAgg > 1:469719/1‑228 (MQ=255) tAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGTGCAGCAGACGACCAATCATAGTACTTTTGCCGTCATCGACGCTTCCACAGGTCAGAAAACGCCGAAgggt > 1:649393/1‑225 (MQ=255) tAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGTGCAGCAGACGACCAATCAGAGTACCTTTTCCGTCATTGCCGCTACCCCAAGACCGGAAACgccgcacgtt > 1:136968/1‑223 (MQ=255) ggTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCAAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTGCTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGAGTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTa < 1:409245/227‑1 (MQ=255) tAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgcagca < 1:453708/157‑1 (MQ=255) aGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCCGCAGACGACCAATCAGAGGACTTTTTCCGTCCTCGACGCTACCCCAGGTCAGAAAACGCAGCAGGCTTTTTtgtt > 1:376657/1‑228 (MQ=255) ggaggCCCTTGTCGCGCTCAGCTTGGCGCCCGTCCCCCAGCAGGGCCAGATCCAGCTTGTCGCCCTGGGTGCCGTGACGCTTACTGGCGTTATGCAGCGATGAGAGCTGAGCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAatcatc < 2:376657/223‑1 (MQ=255) aTGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGGACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGAAGCAGGCTTTTATGTTGTTGCGCAATCATCCa > 1:266303/1‑227 (MQ=255) aTGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGGACTTTTGCCGGCATCGACCCCACCACAAGTCAAAAAACACAGCAGGCTTTTTTGTTTTTGCGCAACCATACAg > 2:591776/1‑228 (MQ=255) tGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGCGCTGATCTTCGTAGATTTGGCGGGTATCGTGCCGCAGACGCCCAATCCGAGTACTTTTTCCGTCACTGACGCTACCACCGGCCAGAAAACGCAACCGGCTTTTATGTTTTTGCGACATCCTCCAg > 2:340679/1‑227 (MQ=255) tGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTTCCGTCATCGACGCTAcc > 2:307739/1‑173 (MQ=255) gTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGGGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAACAGGGTTTTATGTTGTTGCGCAATCACCCAGTGTTCGa > 1:464050/1‑228 (MQ=255) gTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACca < 1:307739/173‑1 (MQ=255) ttCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGCCAGCAAACGCAGCAGGCTTGTATGTTGTTGCGCAATCATCCCAGCtttcac > 1:458435/1‑224 (MQ=255) gCTTGCAGGCCTGCCCCCGGCAGGACCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTGACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCa < 2:8576/228‑1 (MQ=255) cTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAatcatc < 1:298157/206‑1 (MQ=255) ccGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGTGGATCGTGCAGCAGACGGCCAACCAGAGTACTTTTTCCGTCATCGACGCTACCCCAGGTCCGAAAAAACAGCAGGGTTTTTTGTTTGTTCGCAATCCTCCAGGCTCTCAAGCCCCCTTCATTgggagtt > 2:81268/1‑223 (MQ=255) ccGTCCACCAGCAGACCCAGTTCCATCTTTCCGCCGGGGGGGCCGTGACTGTTACTGTCTTTAGTCAGCGATGAGACCTGATCTGTGTAGATTTGGCGGGGATCGTGCAGCAGACGCCCAATCAGAGTACTTTTGCCGTCAGCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGTGCAATCATCCAGGCTTCGAGGCCGCGTTCATTGGCGAtt < 2:410154/228‑1 (MQ=255) gTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTCCATTGGCGATttg > 1:195346/1‑228 (MQ=255) tCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGTCGGGGATCGTGCAGCAGACGGCCAATCAGGATACTTTTTCCGGCATCCACGCTTCCACAGGGCAGAAAACGCAGCAGGCTTTTATTTTGTTGTGCAACAATCCAGGCTTCGACGCCGCCTTCATTGGCGTTttgt > 2:456534/1‑228 (MQ=255) cggcagGGCCAGGTCCAGCTTTTCGCCCTGGGTGCCGTGACGTTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAGCGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGc < 1:636276/226‑1 (MQ=255) cagAGCCAGATCCGGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCaa < 1:381005/227‑1 (MQ=255) ggggcAGATCCAGGTTTTCGCCCTGGGGGCCGTGACCGTTACGGTCGTTATGCAGCGATGAGGGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTg < 2:95125/224‑1 (MQ=255) agCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCCTCGACGCTACCACAGGTCCGAAAAAGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCCAgggg > 1:190975/1‑225 (MQ=255) tCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATAATCCAGGCTTCGCCGCCGCCTTCATTGGCGATTTGTTGTGCAAGt > 1:95125/1‑219 (MQ=255) cTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGGTCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACCGGTCAGAAAACCCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACCCCGCCCTCCTTGGCGATTTGTTTTGGAAATgggggggtacactt > 2:67516/1‑218 (MQ=255) cGCCCTGGGTGCCTGGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTaaaaa < 1:340679/228‑1 (MQ=255) gCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTaaaaa < 1:462783/227‑1 (MQ=255) tGGTTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTTCAGCAGACGACCAATCATAGTACTTTTGCCGTCATCGACGCTACCACAGGGCAGAAAACGCAGAAGGCTTTTTTGTTGGTGCGCAATCATACAGGCTTCGACACCCCCTTCCTTAGCGATTTGTTTTGCAAGTGGGTGGTGCATCTACAAAAAAccc > 2:600721/1‑228 (MQ=255) gTGCCGTGACTGTGACTGTCGTTATGCAGAGATGAGGGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTGCTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCCTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCt < 1:294564/227‑1 (MQ=255) cggttccttttgTTATGCAGCGGTGAGCGCTGATTTTCGGAGGTTTGGCGGGTCTCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTTGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGtttttt < 2:266303/217‑1 (MQ=255) tttcggTCGTTTAGCAGCGATGAGGGGTGATTTTCTGAGATTTGGCGGGTATCGTGCAGCAGACGACCAAGCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCa < 2:562486/222‑1 (MQ=255) ttctttggTTTTGCGGGGATGGGAGCTGATCTTCGTTGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAg < 2:297041/220‑1 (MQ=255) tACTGTCGTTATGCAGCGATGAGAGCTGATTTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGc < 1:94296/228‑1 (MQ=255) tACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTCTGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTTTTCATCTTACAAATACCCCTGACGTTTTTTCAg > 1:608548/1‑227 (MQ=255) aCTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgcagc > 2:353397/1‑58 (MQ=255) cTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgcagca < 1:353397/58‑1 (MQ=255) cGATGAGAGCTGATCTTCGTAGATTTGGCGGGGATCGTGGAGCAGACGACCAATCAGAGTACTTTTGCCGTAATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACCCCCCCTTCATTGGCGATTTTTTGTGCCAGGGCGGGGTTCACCTTAAAAATACCCCCGAAATTTTTTAACGTCCAttaaaccccccg > 2:193030/1‑217 (MQ=255) tatggttgcttttCGTTGATTTGGCGGGTTGCGTCCGCCAAACCACCAAACAGAGTCCTTTGGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGTTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGCCCCCGCCTGGTc < 2:271937/217‑1 (MQ=255) accttgtcttctGAGATTTGGCGGGGATCGTGCAGCAGACGACCAATCCGAGTCCTTTTGCCGTCATCGACGCTCCCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATCCCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTGGTcgcg < 1:207677/222‑1 (MQ=255) cGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCCCAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCCTCCAGGCTTCAACGCCGCCTTCATTGGGGTTTTTTTGGGCAATACCGGGGTTCTCTTTTAAAATACCCCTGACGTTTTTTTAGCTCCCAAACCCCCGCCTGTGCGCggcgaacaccc > 2:607970/1‑219 (MQ=255) cGTAGATTTGGCGGGGATCGTGCAGCAGACGACCAATCAGGGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGCAGCCGCCTTCCTTGGCGATTTGTTTGTCAAGTGGGGGGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTCGTCGCGGGCAATCAcc > 2:655658/1‑227 (MQ=255) gTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACGTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTGGTCGCGGTCAATCAcg < 1:165933/227‑1 (MQ=255) gTAGATTTGGCGGGTATCGGGCAGCAGACGACCAATCAGAGTTCTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATCCCCCTGACGtttttt < 1:645734/190‑1 (MQ=255) tGGGGGGTGACGGGCAGCAGGCGGCCAATCAGGGTTATTTTGCCGGCACGGACGCTACCACAGGGCAGAAAACGCAGCAGGCTTTTTTGTTTGTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTGGTCGCGGTCAATCACGCGGCCCTg < 2:464050/228‑1 (MQ=255) cGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTGGt < 1:516842/203‑1 (MQ=255) tATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGGTTTGTTGTGCAAGTGCGGGGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCCCCTGGTCGCGGTCAATCACCCGGCCCTGACGTTCa > 1:41388/1‑228 (MQ=255) | CATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCGTCATCGACGCTACCACAGGTCAGAAAACGCAGCAGGCTTTTATGTTGTTGCGCAATCATCCAGGCTTCGACGCCGCCTTCATTGGCGATTTGTTGTGCAAGTGCGGTGTTCATCTTAAAAATACCCCTGACGTTTTTTCAGCTCCATAGACCCCGCCTGGTCGCGGTCAATCACGCGGCCCTGACGTTCA > NC_000913/2875048‑2875496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |