| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,125,363 | T→G | 26.1% | H483P (CAC→CCC) | priA ← | Primosome factor n' (replication factor Y) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,125,363 | 0 | T | G | 26.1% | 80.7 / 6.8 | 52 | H483P (CAC→CCC) | priA | Primosome factor n' (replication factor Y) |
| Reads supporting (aligned to +/- strand): ref base T (12/24); new base G (9/7); total (21/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGAT > NC_000913/4125142‑4125589 | gttaggCACCCAGCGTCACCTCCGGGAAAGGGTGCCCTTCCGGCACCATTTGGTTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTTCTTCTGCCA‑TTTGCGGTCCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTgg < 2:360359/223‑1 (MQ=255) cacccAGCGCCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGGGTACCAATCAAAATCCGCGCGCCG‑CCGGGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGc < 1:564440/225‑1 (MQ=255) aaCCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CAGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGCGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGACCAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCAAGCCCCACGGGGACCAG‑GGGCGTGGAccc > 1:459307/1‑225 (MQ=255) ccAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGGGTCTGTTCAAGGTGTTCGGTGCCCAGGCCCCCGGGGGACAG‑GGGCGGGGACACGCAgg > 2:398903/1‑228 (MQ=255) ccAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAg > 1:9991/1‑227 (MQ=255) ccAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGGCTGTTCAAGCTGTTCGGGGGCCCGCCCCCAGGGGACCAG‑GGGCGCGGAAACCCAgg > 2:563286/1‑228 (MQ=255) cGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGGGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAgg > 1:180653/1‑228 (MQ=255) tttCGCCCGCTTTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCt < 1:570159/227‑1 (MQ=255) atccGCCAGCATTTGTGCACCCATCAAAATCCGCGCGCCG‑CCGCGATGTGCTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGGGGTCGATTCGAGAAAGGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCt < 1:571037/224‑1 (MQ=255) ttCGCCAGCATTGGTGTCCCAATCAAAATCCGCGCGCCG‑GCGCGATGTACTTCGGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGa < 1:269163/228‑1 (MQ=255) aGCATTTGGGTACCAATCAAAATCCGCGCGCCG‑GCGCGATGTACTTCGGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGGTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTc < 1:398903/227‑1 (MQ=255) cATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGCACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGGGCCCAGCCCCACGGGGACCAG‑GGGCGTGGAAACGCAGGAAGGGCCCGG‑GCGGGGCACCGGACGCGGAGTGTcaaa > 2:269163/1‑226 (MQ=255) tACCAATCAAAACCCCGGCGCCG‑GCGGGGGGTGCTTTCGCAA‑GTTGCTGTTCCAGCGCCCTTTGGCGGCGGGGGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGc < 2:536837/228‑1 (MQ=255) ccAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCCGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GGGCGAGGAACCGCCGGAAGGGCACTG‑GGGCGGGCCCGGAAGCGGCCTGGCAC‑AGGGGGGGGAg > 2:575139/1‑228 (MQ=255) ccAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCCCGAGCGTCTGTTCAAGCTGTTCGGGGGCCACCCCAACGGGGCCCAG‑GGGCGTGGAACCCCAGGAAGGGCCATGCGCGGGGCCCCGG‑CCCTGACTGGACA‑AGCGGTGGCAg > 2:247182/1‑228 (MQ=255) cgcgcCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCCCGGGGACCAG‑GGGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCCCCGGACGCTAGCTGGCAC‑AGGGGGGGCCACGCAgcgtgggcag > 2:140999/1‑219 (MQ=255) cgcgcCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCCCGGGGACCAG‑GGGCGTGGAACCCCAGGAAGGGCCCCG‑GCCCGGCCCCGGGCGCTTAC‑GGCACAAGTGGGGGCAgcgccaggggggggg > 2:593581/1‑217 (MQ=255) cgcgcCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTAAC‑AGCGGTGGCAGCGCATGTGGtgctg > 1:135446/1‑228 (MQ=255) cccgccgcccgCGTTGTTCTTTGGCCG‑GTTGCTTGTCCCGGGCCCCTTTGGGGCTGGTGGTATCGCGGGCGATTCGAGAAAGGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGtgct < 2:420566/226‑1 (MQ=255) cggATGTTCTGCTGCCA‑GTTTCTGTACCGGCTCCCTTTTGCGGCTGGTGTACTCGCGGTAGAGCTGGGAAATGGGTCCGCCCGGGACCAACGGCGCGGGCTCCTGTTCGAGCGGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCTTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATg < 2:473338/226‑1 (MQ=255) tatgtctttCTGCCC‑GTTGCTGTTCCGTCGCCCCTTTGCGGCTGGTGGTCTCGCGGTGGATCCGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCa < 2:870/221‑1 (MQ=255) aTGTACTTCTGCCT‑GTTGCGGTTCCAGCGCCCCGTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCa < 1:561460/227‑1 (MQ=255) tGTATTTCTGCCA‑TTTGTTGTTCCCGGCCCCCTTTGCGGCTGGTGGTATCGCGGGCGATACGAGAAATGGGCACCGCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTGCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGc < 2:9991/228‑1 (MQ=255) gTACTTC‑GCCAGGTTGCTGTGCCAGCGCCCCTTTGCGGGTGGGGGGATCGGGGGCGATACGAGAAAGGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTGCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGc < 2:6865/227‑1 (MQ=255) a‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCCGATGGTGCTGCGCCTGTTGAAGCGTGTAGGAGTGa > 1:387554/1‑228 (MQ=255) tGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACCCTGACTGTCAC‑AGTGGGGGCAGCGCAGATGGGGCTGCGCCCGATGCACCGCGTAGAAGGGATCg > 1:650289/1‑228 (MQ=255) gcCCCTTTGGGGCTGGGTGTATCGGGGTCGATACGAGAAATGGGCACGCCGGGGAAACACGGCGCGAGCGTCTGTTCAAGCTGGTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCa < 1:408368/227‑1 (MQ=255) ccTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCCCGGGGACCAG‑GTGCGGGGAACCGCAGGGAGGGCACTT‑GCCCGGCACCGGCGGCTGCCTGTCAC‑GGTGGCGGCAGCGCGGATGGTGCTGCCCCTCAGTCAGCGGGGAGGAGTGATCGCAACGGGGGGAtggg > 2:648683/1‑225 (MQ=255) ttGCGGCTGGGGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGc < 1:454046/227‑1 (MQ=255) ggggtATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCca < 1:593581/226‑1 (MQ=255) ggTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGCCGTGGc > 1:392444/1‑228 (MQ=255) gTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCCCAGTCGTGGca > 1:92536/1‑228 (MQ=255) gTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGACGTGGca > 1:439282/1‑228 (MQ=255) gATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGACGGGGcaca > 1:602303/1‑227 (MQ=255) gATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGGGTAGTAGGGATCGCAACGTGGGCATTAGGCAATCCAGCCCCAGGCGGGGcaaga > 2:97985/1‑225 (MQ=255) gggCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GGGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGgcgc > 1:575856/1‑228 (MQ=255) aacaacGGGGCGAGCGGCTGTTCAAGCTGTTCGGTGCCCAGCACCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCAcggc < 1:563286/226‑1 (MQ=255) aacGGCGCGGGCGGCTGTTCAAGCGGGTCGGGGCCCAGCCCCAGGGGGACCAG‑GTGGGTGGAACCGCGGGAGGGGCACGG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGtt < 2:156138/227‑1 (MQ=255) ggtgtttCATGCTGTTCGGGGCCCAGCCCCACGGGGACCAG‑GGGGGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACCGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATg < 2:459307/223‑1 (MQ=255) ttGTTCAAGCGTTGCGGGGCCCAGCCCCACGGGGACCAG‑GGGCGGGGAAACGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACGGGCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGAc < 2:602303/227‑1 (MQ=255) tggtccacgCTGTTCGGGGCCCGGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCAGTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGAc < 2:553702/220‑1 (MQ=255) ggtggtCGGTGCCCACCCCCCCGGGGAACGG‑GTGGGTGGAACCGCAGGAGGGGCACTG‑GGGCGGCCCCGGTCGCTGACTGTCAC‑AGGGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTAt < 2:24167/223‑1 (MQ=255) agggTTCGGGGCTCGGCCCCACGGGGACGAG‑GGTCGTGGAACCGGAGGAAGGGCGCTG‑GCGCGGCACCGGAGCGTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGGGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTAt < 2:135446/225‑1 (MQ=255) cTGTTCGGTGCCCAGCCCCCAGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTAt < 1:97985/227‑1 (MQ=255) tggtCGGGGGCCAGCCCCACGGAGACCAGCGTG‑GGGGAACCGAAGGAAGGGCAGTG‑GCGCGGCACCGGACGCTGACTGGCAC‑AGTGGGGGCGGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGAGCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCCGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATc < 2:33763/224‑1 (MQ=255) gTTCGGTGCCCAGCCCGCCGGGGCCCAG‑GTGGGGGGAACCGGAGGGAGGGCACTG‑GGGCGGCACCGGACGCTGAATGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATCCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAg < 2:636599/228‑1 (MQ=255) tCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGTGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTACGAAAGGGCATGCACTCGTTTTCAGcc > 1:564409/1‑228 (MQ=255) gggCCCAGCCCCACGGGGCCCAG‑GGGGGTGGGACCGGAGGAAGGGCACTG‑GGGGGGGACCGGAAGCTGACTGGCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGGAGGGATCGCAAAGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGt < 2:387554/226‑1 (MQ=255) aGCCCCACGGGCACCAG‑GTTCGGGGAACCGCAGGAAGGGCCCGT‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGc < 1:209114/228‑1 (MQ=255) cccACGGGGACCAG‑GGGCGTGGAACCGGAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTg < 1:66217/227‑1 (MQ=255) cccGGGGACCAG‑GGGCGTGGAACCGCAGGACGGGCACTG‑GCGCGGCCCCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGgcg < 2:466530/226‑1 (MQ=255) cAG‑GGGCGTGGAACGGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGa < 1:13106/226‑1 (MQ=255) gtgggtggAACCGCGGGAGGGGCACTG‑GCGGGGCACCGGACGCTGACTGTCAC‑AGGGGTGGCAGCGCAGAGGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGAt < 2:469469/228‑1 (MQ=255) | GTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGTACCAATCAAAATCCGCGCGCCG‑CCGCGATGTACTTCTGCCA‑GTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGGACCAG‑GTGCGTGGAACCGCAGGAAGGGCACTG‑GCGCGGCACCGGACGCTGACTGTCAC‑AGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGAT > NC_000913/4125142‑4125589 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |