| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,877,287 | A→C | 21.5% | G82G (GGT→GGG) | yoaF ← | DUF333 family outer membrane lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,877,287 | 0 | A | C | 21.5% | 89.1 / 2.1 | 58 | G82G (GGT→GGG) | yoaF | DUF333 family outer membrane lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (20/22); new base C (5/10); total (26/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGG > NC_000913/1877049‑1877508 | aaCGGAACTGCGCAAAGCCTTTCCCGGCGAAGGCGGCGATTATGCAACCTTGCGCGAGCAATATCTTGCAGAACTGGCGCAACCCGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCa < 1:849149/239‑1 (MQ=255) ccGGAACTGCGAAAACGCTTTCCCGGCGAAGTCGCCCATTAGGAAACCTTTCGCGAGCAATATCTTGCAGAACGGGCGCAACAGGAGAAAGAAGGAAAGCGGCGGGCGGACACCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCGGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCAc < 2:254527/238‑1 (MQ=255) cgcAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTTCCCAGCCGGAt > 1:650962/1‑239 (MQ=255) aaaCCCTTTCCCGGGGAATGCGTCGATGTTGCAACCTTTCGCGGGCAATATCTTGCAGAACGGGCGAAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGt < 2:785968/239‑1 (MQ=255) ctcttttCGCGGCGAATTCGTCAATTATGCACCCTTTGCCGAAAAATTTCTTGCGGAACGGGCCCAACGCGGGAAGGAAGGAAAGGGGCTGGCGGACATCGCCAAAAAACAGCCCAGGCCCCTGCACCACTCAGCAAAAAACACCACGCAGACCCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCCCCAGCCGGATGGTCa < 2:219033/235‑1 (MQ=255) aGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTCCGTAGCTCGTGATTTTTGAACAGCATCCGGCGGTTTATTTTTGACC‑GCCGGATGGTc > 1:216042/1‑238 (MQ=255) gggttgttATGGAACTTTTCGCGCGAAAATTCTGGCCAAACGGGGCAAACCCGGGCAAGAAGGAAAGCGGCTGGCGAAAATCGCCAAAAACCAGCCGTGGACCCGGCCTTACTCAGCAAAAAACACCCCGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCa < 2:521330/232‑1 (MQ=255) ttATGCAACTTGGCGCGAGCAATACCTTGCAGAACTGGCGCAACACGGACAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtcatc < 1:539147/238‑1 (MQ=255) tttCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAACCGGATGGTCACGCCGCCACACTGCCCCTTCATCAAACGtttaa > 1:125666/1‑236 (MQ=255) ttCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGGGCTGGCCGACTGGCTACGTAACTTGTGATTTTAGTACAGCATCCGGCGG‑TTTTTTTTTCACACCCGGATGGTGAAGCCCCCCAAATGCCCCTTCATCAAATGtttacc > 2:310186/1‑235 (MQ=255) gCAATATCTTGCAGAACTGGCGAAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACCCCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCgg < 1:319524/238‑1 (MQ=255) tatCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAGGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGcc < 1:171076/231‑1 (MQ=255) aGAACGGGCGCAACCCGGGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCAGGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAtt < 1:911398/238‑1 (MQ=255) aCTGGCGCACACCGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAACCAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAttgttg < 1:310186/239‑1 (MQ=255) cTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑GTATTTTTTACCACCCGGCTGGGCACCCCGCCCCAACGCCCCTTCCTCATTCTCTTTTCCCCCCGCGACTTTTCCATTGTTGc > 2:591156/1‑239 (MQ=255) tgcgcAACCCGCGCAAGAAGGAAAGCGGCTGGCGGAAATCGCCAAAAAACAGCCGCTGACCCTGCTCTCCTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTg < 2:283121/238‑1 (MQ=255) ggCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGAACCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCCTTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTg > 1:133189/1‑239 (MQ=255) gcAACACGAGCAAGAAGGAAAGCGGCTAGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTCCAGCATCCGGCGG‑TTATTTTTCACCCGCCGGATGGTCACGCCGCCCCAATGCCCATTCATCAAACGGTTCCCCGCCCGGTAATTTGCAAATTTTGCTTA‑c > 1:382435/1‑238 (MQ=255) ccAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCAAAAAAACAGCCGCTGCCCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCCCCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑c < 1:535697/237‑1 (MQ=255) gtcaaagaagGAAAGCGGCGGTGGGACCTCCGCAAAAACCACCCGGGGACCCTGTACTACCCAGCAAAAAACACCCCGCAGAACCATGCGCGGGTGCTGGCCGACTGGCAACGTAGCTTGGGATTTGAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTgcg < 2:560969/235‑1 (MQ=255) aGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCTCCCGCTAATTTGCCATT‑TTGTTCA‑ccccctttc > 1:914657/1‑232 (MQ=255) aGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTAACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGGAATTTGCAATTGTTGCTTA‑CCCCTTgc > 1:123403/1‑237 (MQ=255) tcaGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCCCCACAATGCCCCTTCCTCAATCGGTTTACCCCCCGGGAATTTGCAATTGTTTCTGACCCCCTTGCG‑TGTCTG‑c > 1:857622/3‑236 (MQ=255) aaaggcgCTGGCGGCAATCGCAAAAAACCAGCCGCTGACCCTGTTCTACTAAACAAAAAACACCCCGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCCTCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑Ca < 1:82583/231‑1 (MQ=255) aaGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑GTATTTTTTTCCCACCGGCTGGGCACGCCGCAACAAAGCCCCTTCATCAATCGTTTCTCCCCCCCGGAATTTTCAATTGTTGCTCA‑CCCCTCGCCCTGTCtctcctg > 2:528836/1‑233 (MQ=255) gCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGCCTGGCTACGTAGCTTGGGATTTTAGTACAGCATCCGGGGG‑TTTTTTTTCCACAACCGGATGGTTACGCCGCCACAATGCCCATTCCTCAAACGTTTCACCGCCCGGCAATTTTCCATTGTTGCTTA‑CCCCTTCCCCTGCCtcccccgga > 2:528861/1‑231 (MQ=255) cTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTTA‑CCCCTTGCGCTGTCTG‑CACTGGAATg > 1:728330/1‑238 (MQ=255) ggCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCCCAATTCCCATTCATCAATCGTTTCACCCCCCGGGAATTTGCAAtt > 1:700604/1‑202 (MQ=255) gcaacgccaaaaaaaCCGCCGGGGACCCTGCTTTCGTCAGAAAAAACCACCACGCAGAACCATGGGCTGGTGCTGGCCGACTGGCTAGGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGAGGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTc < 2:799427/229‑1 (MQ=255) cacacccccAAAAAACCCCCGCTGCCCCTGCTCTCCCCCGCAAAAAACCCCCCGAAAAACCATGCGCTGGTGGTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCACCCGGCGG‑TTATTTTTCCCCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTcc < 2:268738/232‑1 (MQ=255) aaacCAGCCGCTGCCCCTGCTCTACTAAGCAAAAAACCCCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGGTATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTctgc < 1:591156/239‑1 (MQ=255) ctcttctACCCACAAAAAACCACCCCGCAGAACCAGGGCGTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCCCCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACg < 2:650962/235‑1 (MQ=255) ccaCTGAGGAAAAACCACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGGACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCgta < 1:528836/237‑3 (MQ=255) cTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCCCCCGCCGGATGGTCACCCCCCCCCAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTTCAATTGTTGCCGC‑CCCCTTTCCCTGTCTG‑CCCTGGAATGGGCGTCCCCCCCCTTTCCTGGCAAAAAACACCGGCCGGAttt > 2:5054/1‑239 (MQ=255) aGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTTA‑CCCCTTGCGCTGCATGCCACT‑GACTGAACGTCCCGCCCTCCGTCTGGCCATAAGCCGCGCCCGGGTTTGc > 2:243509/1‑238 (MQ=255) cAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCCATTTTTGCTGA‑CCCCTTTCGCTGTCTT‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCAGGGATTGCCAt > 2:202619/1‑239 (MQ=255) cAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTTTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGGATTAGCGTCCCGCCCTTTTGCCGGCAAATAACCCACCCCGGCTTTGCCaa > 2:324737/1‑238 (MQ=255) aaaaacCCCCCCCCAAAACCATGCCCTGGTTCGGGCCGACTGGCTACGGAGCTTGTGATTTTAGTACAGCACCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATa < 2:857622/239‑1 (MQ=255) aaaaCACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATAcc > 1:575010/1‑239 (MQ=255) aaCACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCCCCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTTCCATTCCaa > 1:214289/1‑239 (MQ=255) cacGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATTAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCttc > 1:28631/1‑237 (MQ=255) cgcgGAACCAGGCGCGGGTGCTGGCCGACTGGCTACGTAGGTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTgcgg < 1:727722/239‑1 (MQ=255) cGCAGAACCAGGCGCGGGGGCTGGCCGACGGGCGACGTAGCTTGTGATTTTAGTACAGCAACCGGCGG‑TTATTTTTCACCAGCCGGATGGGCACGCCGACACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTGGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTgcgg < 1:614830/239‑1 (MQ=255) gCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTgcgg < 1:649710/238‑1 (MQ=255) acccATGCGCGGGTGCTGGCCCACGGGCTACGTAGCTTGTGATTTTAGTCCAGCACCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGt < 1:210317/236‑1 (MQ=255) tGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCCATTGTTGCTGA‑CCCCTTTCTCTGTCTG‑CCCTGGAATGAGCGTCCCGCCCTTCTGCTGGCCCACGACCGACGCCGGGTTTCCCCTACCAAACTTcggg‑ggggttagg > 2:649710/1‑232 (MQ=255) tGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGAc > 2:47036/1‑199 (MQ=255) tGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGAc < 1:47036/199‑1 (MQ=255) cgcTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTCCGCC‑GGTTTTggggg > 1:350484/1‑236 (MQ=255) tGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTc < 1:202619/239‑1 (MQ=255) tGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCCCCCGGTAATTTTCAATTTTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCCCCCTTCTGCTTGCAATCAACCGCAGCCGGATTTGCCCTACCAACCTCCGCCGGGTTTAgtgtacc > 2:560853/1‑233 (MQ=255) ccaCTGGCTCCGTGTGTTGTATTTTTATTCCCGCCCCCGGGGT‑TTTTTTTCCCCCACCCGGATGTGCCCGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTgag‑a < 2:568139/236‑1 (MQ=255) ttgtccAGCCTCCGGGTG‑TTCTTTTTCCCCAGCCGGAGGGTCACGCCGCCACAATGCCCCTTCACCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCa < 2:728330/234‑1 (MQ=255) tggTACCGCCTCGGGGGT‑TTTTTTTTCCCCAGCCGGATGGTCACCCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCa < 2:186625/237‑1 (MQ=255) atgtcccgagaccGGTGG‑TTATTTTCCCCGACCGGGATGGCCACGCCGCCACCATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGCCCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCa < 1:362162/228‑1 (MQ=255) cAGCATCCGGCGG‑TTATTTTCCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCagcaag < 1:428626/239‑1 (MQ=255) cATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTATGGGGTTTCGGCTGCGAAAGGGGGTGAAAAACC‑CCCCGGACCCgcaaacaa > 1:186625/1‑239 (MQ=255) cccGGTGT‑TTTTTTTTCCCCAGTCGGTGTGTCCCGCCGCCACAATGCCCTTTCATCAATCGTTTCCCCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAgg < 2:123403/238‑1 (MQ=255) cccGGCGT‑TTTTTTTCCCCCCGCCGGATGGTCACCCCGCCACAATGCCCATTCCTCCATCGTTTCCCCGCCCGTTAATTTGCAATTGTTGCTTA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAgg < 2:912761/238‑1 (MQ=255) | AACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGG‑TTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATTGTTGCTGA‑CCCCTTGCGCTGTCTG‑CACTGGAATGAGCGTCCCGCCCTTCTGCTGGCAATAGACCGACGCCGGATTTGCCATACCAATCTGCGGC‑GGTTTAGGTGCTTCTGGCTGAG‑AAGGGGTTGAACAACCAGCCAGGACCAGCAAGCAAGG > NC_000913/1877049‑1877508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |