| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 550,033 | A→G | 14.3% | E136G (GAG→GGG) | ylbF → | putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 550,033 | 0 | A | G | 14.3% | 163.7 / 2.4 | 73 | E136G (GAG→GGG) | ylbF | putative anaerobic allantoin catabolic oxamate carbamoyltransferase; DUF2877 family protein |
| Reads supporting (aligned to +/- strand): ref base A (27/32); new base G (4/7); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
TGCGCAATTCGATGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTAT > NC_000913/549800‑550262 | tGCGCAATTCGATGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGAACCGCTGCCTGCT‑GGGTTa > 1:406373/1‑238 (MQ=255) ggcAATTCGGTTGGTGATGCGGTGGATTATGCGGAAATGAACGACCACAGGTGGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACg < 1:864997/237‑1 (MQ=255) tGCGTTATGCGGTGGATTATGCGGCAATGAACGCCCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGCGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCCCACGCTGCT‑GAGTTACGCCAGGTTCgga > 2:54259/1‑237 (MQ=255) tGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GGGTTACGCCCGtttggg > 1:719880/1‑235 (MQ=255) gTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACt > 1:467708/1‑239 (MQ=255) tATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCCCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGACACCGGGCTTTTCGGGCCACTGGCGTTGCCGGCAAGCGACCCGCTGACTGCT‑GCGTTACGCCAGTTTCGTCCCtct > 1:274191/1‑237 (MQ=255) tGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACAACTGGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGCCATTTCTGTCCCCTGGCATGTGCGGCAAGCGACTCGCTCCCTGCT‑GCTGTACGCCAGTTTCCTAACTGTTTTCAg > 2:863843/1‑238 (MQ=255) gATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGAGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATGCGCTGCCTGCT‑GGGTTACGCCAGTTTCGTCACTGTTTTCAGGcc > 2:731883/1‑239 (MQ=255) tGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCGGCCTGCT‑GGGGTACGCCCGTTTCGTCCCTGGTTTCAGGCCccgc > 1:285960/1‑238 (MQ=255) cAATGACCCACCACAGGTTTGGGCTCAAGGGATTCCCCTCGGGCG‑TTTCGCGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAAt < 1:366350/238‑1 (MQ=255) cAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCCTGGATGCAACGCGCGGAGGCAACCGGGCTTTTCGGGCCACTGGCGTTGGCGCCAGGCGATCCGCGGCCGCCT‑GAGTTGCGCCCGTTTCTTCCGTGTTTCAAGGCAGCGCTCAATg > 2:307734/1‑239 (MQ=255) agagcacgtacaGTTTGTGTCGAAAGGGGTTCGCC‑CGGGCGTTTTCACGGTTAATCCGCCGCGGGGTTATTGTGTGGTGAGTTTTCCGCCGCCTGGGCATCCGCAACCCCTGGCAGGTGCATGGATGCAACGCGCGGATGAAACCGGGGTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCg < 2:763199/230‑1 (MQ=255) acaGGTTGTGGCTCAAGGGATTCGCCTGGGGGG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCg < 1:806665/239‑1 (MQ=255) tgtgGCCCGAGGGTTTCGCCTAGGGCG‑TTTCCCGGTTAAACAGCCAAGGCGTTATGTGTTGCTGCGTATTACCCCGCCGGCGCATCCTCAACCACGTGCAGCTGCAGGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCGGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTgg < 2:341949/238‑1 (MQ=255) tgGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCGGCT‑GAGTGACGCCAGTTTCGTCACTGTTTTCAGGCCCAGCCCACTGGGGTTAAGACCGACggggg > 2:685415/1‑236 (MQ=255) tgGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAACCTATCCGCTGCCTGCT‑GCGTTACGCCAGTTTCGTCACTGGTTTCAGGCCGCGGTCAATGGGTGTAAGAACGACTggcgg > 2:222960/1‑239 (MQ=255) gCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTGTTCAGGCCGCGCTCAATGGCGTTCAGACCGa > 1:763199/1‑230 (MQ=255) aaGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGCGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTggcggaccgg > 1:339212/1‑233 (MQ=255) cGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCCCTGGCT‑GGGTaa > 1:612495/1‑239 (MQ=255) gggCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCATCTGCATGGCTGCAACGCGCGGCGGAAACCGGGCTTTTCGGACCACTGGCGTTGGCGGCAAGCAATCCACTGCCTGCT‑GAGTTACGCCGTTTTCGTCCCTCTTTTCCGGCCGGCCTCAAAGGCGTTAAGCCCTACTGGCGCCCATTGCT‑GGGAGAAggga > 2:653322/1‑236 (MQ=255) gggCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACGTTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCG‑GGGTAAAGGcc > 1:556848/1‑238 (MQ=255) tttCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGAt > 1:816171/1‑239 (MQ=255) ttCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCCCAATGGCGTTAAAACCGACTGGCGGCACTGGCG‑GGGTAAAGGCCCCGGGtt > 2:653754/1‑239 (MQ=255) ggTTAAACAGCCAAAGCGTTATTGTTTGGTGCGTATTACGCCGCCTGCGCAATCTCAACCACTTGCAGCTGGATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGc < 1:569619/239‑1 (MQ=255) gTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCCCTGGCT‑GGGGAAAGGCCCCGGGTTAAcccc > 1:916114/1‑239 (MQ=255) ttAAACCGCCCAAGTTTTTTTGTTTGTCGGGTATTAGGGCGCCGGGGCACCCTAAACCTCTTGAAGGTGCATGGATGGAACGCGGGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGcc < 2:406373/238‑1 (MQ=255) atAAACGGCCTCGGGGTTGTTGTTTGCTGGGTATGACGCCGCCTGAGCATGCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAGCAGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGc < 1:489595/236‑1 (MQ=255) ttttttttttGCTTCGTTTTCCGCCGCCGGGGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACg < 2:816171/232‑1 (MQ=255) tgctgcGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACCTGCT‑GGGTAAAGGCCCCGGGTTAACACCGGGTCGTGATGAACAGCCGAGCGGa > 1:765411/1‑239 (MQ=255) gctgcGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAgg < 1:606928/149‑1 (MQ=255) gctgcGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAgg > 2:606928/1‑149 (MQ=255) cGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCcgcg > 1:91424/1‑150 (MQ=255) cGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCcgcg < 2:91424/150‑1 (MQ=255) aTTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCCCTGGCT‑GGGGAAAGGCCCCCGATTAAAGCCCAGACATGGTGCAACCCTGGGGGGaaacacgcc > 2:488704/1‑232 (MQ=255) tcgcgcgccTGCGCATCATCAACCGTGTGAAGCTGCAGGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACGGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTgg < 1:834506/234‑1 (MQ=255) cgccTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGcc < 1:653754/239‑1 (MQ=255) ccccTGCGCCTCCGCCACCCTTTGCAGCTGCGTGGATGCAACGCGGGGAGGAAACCGGGCTTTTCGGGCCCCTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGcc < 2:285960/237‑1 (MQ=255) ccTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCCCTGGCT‑GGGGAAAGGCCCCGGCTTAAACCCGGGCCATGATGAAACCCTGAGCGGAAAGCTGCGGGGGGcccg > 2:380126/1‑237 (MQ=255) ccTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGTCT‑GGGGAAAGGCCCCGGATTAAAGCCGAGGCCTGGTGACAAGCTGGGCGGAATGCGgcgggcgggcgg > 2:371294/1‑235 (MQ=255) gcgcATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAAGCCCCGGATTAAAGCCGAGTCATGATGACACCCCGAACGGAATGCTGCTGGGGGCCTggga > 1:897431/1‑237 (MQ=255) ccTCAACCTATTGCAGCTGCAGGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATgg < 1:697277/239‑1 (MQ=255) ccTCAACCACTTGGAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATgg < 1:488704/239‑1 (MQ=255) aCCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGCTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGGATTATGGCGCtt > 1:410714/1‑239 (MQ=255) tGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCACCTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATg < 1:784431/239‑1 (MQ=255) cTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGCCACGCTGAGCGGAATGCTGCTGGCGGCCTGGGATTATTGCGCTTTAGATgcgcg > 1:835721/1‑238 (MQ=255) aTGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTTACGCCGAGTCATGCTGACACCCTCACGGGAATGTGGCCGGCGGCCCGGGTTTATGGCGCTTTAGTGGCGCGCCCCg > 2:54996/1‑239 (MQ=255) aCGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACACCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGCATTATTGGGCTTTAGATGCGCGCTCCGGTGTTCCGt > 1:602025/1‑239 (MQ=255) cgcgGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTa < 2:486901/137‑1 (MQ=255) cgcgGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTa > 1:486901/1‑137 (MQ=255) cgGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGCTTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGACTGGTATTATGGCGCTTTAGATGGGCGCCCCGGTCGGCCGgttttt > 2:410472/1‑239 (MQ=255) gaggaAACCGGGCTTTTCGGCCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTTCGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTg < 1:805877/238‑1 (MQ=255) aggaAACCGGGTTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGc < 1:380126/238‑1 (MQ=255) ggggTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GGGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGa < 1:685415/239‑1 (MQ=255) gggTTTTTCGGGCCCCTGGGGTTGGCGGCAAGCGTTCCGCTGCGTGCT‑GAGTTACGCCAGTTTGGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGCCCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGa < 2:916114/239‑1 (MQ=255) gCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCGCCGGTCGGCCGTTTTTTGCCTGTTCCGACa > 1:263733/1‑239 (MQ=255) gCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGGCATGATGACACGCTGAGCGGGATGCTGCTGGCGGCCTGGTATTATGGGGCTTTAGATGCCGGGCCCGGTCGCCCGTTTTTTGCCTGGTCCGACa > 2:19802/1‑239 (MQ=255) gttttGGGGCCCCTGGGGGTGGGGGCAAGGGATCCGGTGCCTGTT‑GAGTTACGGCAGTTTCGTCACTGGTTTCAGGCCGCGCTTAATGGCGTTAAGACCGAATGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACa < 2:467708/237‑1 (MQ=255) cTTTTCGGGCCACTGGCGTTGGCGGCAAGCGAGCCGCTGCCTGCT‑GAGGTACGCCAGTTTCGTCACTGTGTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGAGTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGTCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACa < 1:692186/238‑1 (MQ=255) cGGGCCGCTGGCGTTGGGGGGAAGCCATCCGCTGCCTGCT‑GAGTTTCGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGGCCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGc < 1:547152/239‑1 (MQ=255) cGGGCCCCTGGCTTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGc < 1:715734/239‑1 (MQ=255) ggcccatGGCTTTGGGCGCAAGCGATCCGCTGCCTGCT‑TGTTTCCGCCAGTTTCGTCACGGTTTTCCGGCCGCGCTCAATGGGTTTAAGCACGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa < 2:556848/233‑1 (MQ=255) gcagcTGGCGTTGGCGGCAAGGGATCCGCTGCCTGCT‑GGGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa < 1:584693/234‑1 (MQ=255) gCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGGTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa < 1:876113/238‑1 (MQ=255) gCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAATTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa < 1:730093/238‑1 (MQ=255) ccACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GGGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGGTAAAGGCCCCGGATTAACGCCGCGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCaa < 1:87820/238‑1 (MQ=255) aaGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCCATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTg < 1:210500/238‑1 (MQ=255) aaGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTg < 1:19802/238‑1 (MQ=255) ttCCGCTGGCTGCT‑GAGTTGCGCCAGTTTCGTCAGTGTTTTCAGGCCGCGGTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGt < 1:797230/237‑1 (MQ=255) ttCCGCTGCCGTCT‑GGGTTTCGCCCGTTTGGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTc < 2:765411/238‑1 (MQ=255) aTCCGCTGCTTGCT‑GGGTTGGGCCAGTTTCGGCACTGTTTTCGGGGCGCGCTCAATGGCGTTAAGACCGACTGGCGGGACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGCCACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTc < 2:624210/239‑1 (MQ=255) tCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTc < 1:757587/238‑1 (MQ=255) ccGCTGCGTGCTGGGGTTAC‑CGAGTTGCGTCCCTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAg < 2:719880/239‑1 (MQ=255) tggctgct‑gAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGGTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTAt < 1:371294/236‑1 (MQ=255) | TGCGCAATTCGATGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCG‑TTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCT‑GAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCT‑GGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTAT > NC_000913/549800‑550262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |