| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,502,756 | C→T | 19.2% | E226K (GAA→AAA) | insG ← | IS4 transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,502,756 | 0 | C | T | 19.2% | 101.7 / 4.2 | 50 | E226K (GAA→AAA) | insG | IS4 transposase |
| Reads supporting (aligned to +/- strand): ref base C (2/38); new base T (8/2); total (10/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.46e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACAGATCCCCCATTTCTCCTCCGGGGAAGCGCATGGCGTCCGTCATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGCATGTGTCTGGCGGGGGA > NC_000913/4502513‑4502986 | ccacaTCCCCCTTTTCCCCTCCGGGGAAGCGCAGGGGGCCCGTCACCGACGCCAGCAGTTGGAAGCTTTTTCC‑TTTGCCGGTCCCGGTCACCAGGCGGGCAGTCCCTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACC‑‑‑‑‑‑‑CTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTtctc < 2:610719/235‑1 (MQ=255) ccccATTTCTCCTCCGGGGAAGCGCATGGCGTCCGTCATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCTTGCCTGCGGGCTGGTTTTCAGCTTACCCCGATGATCGCCTTTACCCAGTTTTCTGGTCTCTTCATATTGCCCTCCCTTCCTCGGGGGATTCATCCAGTGGCGGGTTtct > 2:81351/1‑238 (MQ=255) ccccATTTCCCCACCGGGGAAGCGCAGGGCGTCCGTCATGGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTtctc < 1:292430/239‑1 (MQ=255) ccATTTCTCCTCCGGGGAAGCGCATGGCGTCCGTCATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTTTcc > 1:117236/1‑238 (MQ=255) ccATTTCTCCTCCGGGGAAGCGCATGGCGTCCGTCATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACC‑‑‑‑‑‑‑CTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGGGGTTTTCCGCCCgg > 1:610719/1‑238 (MQ=255) ttCCCCCCCGGGGAAGCCCATGGCGGCCGTCAGCGGCGTCAGTAGATGGCAGTCTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCa < 1:724208/239‑1 (MQ=255) tctcCTCCGGGGAAGCGCATGGCGTCCGTCATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGCTGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTTCGCTCCCTTTCTGAGAGGTATCATCCAGTGGGGGCGGTTTCTCGcccc > 2:750506/1‑237 (MQ=255) tccGGGGAAGCGAGTGGCGTACGTCGACGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTAACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCCCTTTTTGCGGGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTcc < 1:628689/239‑1 (MQ=255) cccGGGGAAGCGCATGGCCGCCGTCATCGCCGGCATCAGATGGCAGACTTTTCC‑TTTGCGCGTCCCGGTCAGCGGGCGGGCAGGCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTcc < 2:824813/238‑1 (MQ=255) cccctGGCGTCCGTTCTCGGCGCCAGCAGATGGCCGCTTTTTCC‑TTTGCGCGTCCCGGTCCGCCGGCGGGCAGTCATTTCATTTCCCAGTCCCGGCCCCTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTaa < 2:395462/235‑1 (MQ=255) gcgtGGCGCCGGTCTTCGTCGTCAGCAGATGGCAGACTGTGCC‑TTTGTGCGTCACGGTCAGCTTGCGGGCAGTCACTTCATTCCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGTGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTaa < 1:351081/235‑1 (MQ=255) ccATGGGGTCCGGCATCGACGTTCGCAGTTTGCAAACTTTTCC‑GTGGCGCGTCACGGTCAGGAGGCGGGGCGTCCCTTCATTTCCCAGTCCCGGCCACTTTTTTCGTCCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTTTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTaa < 2:30030/237‑1 (MQ=255) gccgtcAACGGCGTCAGGAGATGGCAGATTTTTCC‑TTCGCGCCGCACGGGCAGCAGGCGGGCAGTCACTTCATTTCCTAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAg < 1:61481/238‑1 (MQ=255) ccgtcATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCTCTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGt < 1:340211/239‑1 (MQ=255) cgtcATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGGATAATCCAGTGGCGGTGTTTTCCCCCCCGGTCCCCGGCCATTTACAGTGCCCGTg > 1:855322/1‑239 (MQ=255) cgccATCGACGTCAGCAGTGTGCAGCCTTTTCC‑TTTGGGCGTTCCGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCCCCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGt < 1:582100/235‑1 (MQ=255) cggcgtcgtcagATGGCATAGTTGTCT‑TTTCGGTCTCACTGTCCTCAGGCGGGCAGTCACGTCATTTCCCAGTCCCGGCCCCTTTTTTCGTGGCTGTGGGCTGGTTTTCAGCTTCACCAGGTGATCGCTTTGGCCAAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCATGCATTTAACAGTCCCAGTGAGtaac < 2:151120/230‑2 (MQ=255) cggcGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCCGGCGGGCAGTCCCTTAATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGtaat < 1:889627/236‑1 (MQ=255) agATGGCAGACTTTTCC‑TTTGCGCGTCCCGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTAt < 1:16262/238‑1 (MQ=255) ctcgttttttCCTTTTGCG‑GTCCCGGTCCACGGGCGGGCATTCCCTTCTTTTCCCAGCCCCGGCCACTTTTTTCGGGCCTGCGGGCTGGTTTTCAGCTTCCCCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTa < 2:261719/233‑1 (MQ=255) ttttCC‑TGTGCGCGTCGCGGTCAGCAGGGGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTGCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCa < 1:243073/239‑1 (MQ=255) tCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTTTCCCCCCCGGCTCCAGGCACTTTACAGTCCCCGTGAGTAATAAA‑CTTTATCCATTTACGTCataa > 1:676470/1‑236 (MQ=255) cACGGTCAGCGGGCGGGCAGTCACTCCA‑TCCCCAGTCCCGGCCACTTTTTCCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGt < 1:506043/239‑1 (MQ=255) ggTCCGCAGGCGGGCAGTCCCTTCATTTCCCAGTCCCGGCCTCTTTTTTCGTGCCTGCGGGCGGGTTTTCAGTTTCCCCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGttt < 2:219754/239‑1 (MQ=255) tCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTTTCCCGCCCAGCCCCACGCCTTTTACAATACCAGTGGGTAATAACACTTTTTCCCTT‑ACGTCAAAGGGTTTTCGCTGGtcctt > 1:18080/1‑235 (MQ=255) agcagGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTaa < 1:914524/179‑1 (MQ=255) gaagggggtaaGTCTCTTTATTTCCCAGTCCCGGCCACTTTTTGCGTGCCTGCGGGCTGGTTTGCAGCTTCACCAGATGATCGCCTTTACCCAGTTTGCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCt < 2:445415/229‑1 (MQ=255) ccgggggggCATTCTCTTCCTTTCCCAGCCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCCCCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCt < 2:676470/233‑1 (MQ=255) cagGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTTTCCCGCCACGCTCCCGGCATTTTAAAGTACCCGTGAGTGAAAAA‑CTTTTTCCCATAACCTCAGAAGGTTTTCTCCggggttttttt > 1:722299/1‑230 (MQ=255) aCTTCATTTCCCAGGCCCGGCAACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCGGAGCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGc < 1:81351/239‑1 (MQ=255) ttCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCAttt < 1:919557/160‑1 (MQ=255) ggcccGGCCCTTTTTGGCGTGCCTTGGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCg < 1:348699/237‑1 (MQ=255) cGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTTTCCCGCCACGCTCCCGGCCTTTTAAAATCCCCGGGAGTAATAAC‑CCTTATCCCTTAACGTCAGAGTGTTTTCGCCGGGTTGTTCTATAAATTTCTCAGCAAACTCATTTTCTCTGTTCTTCATCGTGCCGAAGGCt > 1:904830/1‑238 (MQ=255) gCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCa < 1:873907/238‑1 (MQ=255) cTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCg < 1:300333/199‑1 (MQ=255) ccAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTg < 1:169062/239‑1 (MQ=255) atgatCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCaga < 1:384994/142‑1 (MQ=255) ccAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAg < 1:750506/239‑1 (MQ=255) ctgTTTTCTTTTCTTTTCATTTTGCCCTCCCTTTCTGGGAGGTACCATCCAGTGGCGGTGTTCCCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGa < 2:343748/237‑1 (MQ=255) ttttCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTTACAGTCCCAGTGAGGAATAAA‑CTTTATCCCTTAACGTCAGAGTGGTATCTCCGGTTTGTTCTTTAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCTTTCCCAAGGCTCCAGCCGTCCCCAGATGGCTGGTCCATTCCCTCTTGcgggc > 1:670782/1‑233 (MQ=255) ttttCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCg < 1:571614/172‑1 (MQ=255) ttttCTGATCCCTTCATTTTGCGCTCCTTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCCCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGaa < 2:776876/192‑1 (MQ=255) ctctTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCg < 1:774867/163‑1 (MQ=255) ctTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGGCCATTTTGACCTGc < 1:75053/239‑1 (MQ=255) tatTGCGCTCCCTTTCTGGGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTa < 1:328941/239‑1 (MQ=255) tCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTTCCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCg < 2:152541/166‑1 (MQ=255) tCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGGTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGGTATTGCCGGGTTGTTCTATAAATTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTTCCTCTTGCGGACCCCTTTTACCTTCGGGGGGAGCGccc > 1:443496/1‑238 (MQ=255) tCCCTTGCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCg < 1:460279/239‑1 (MQ=255) gagggTATCATCCGGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTTTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGc < 1:415310/236‑1 (MQ=255) ccccggggCGGTTTTCTCCCGCCCGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGCATGTGTCTgg < 2:904830/233‑1 (MQ=255) ggCGTTGTTCTCCCGCGAGGCTCCAGGCATTTAACAGTCCAAGTGAGTAATAAC‑CTTTATCCAGTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTAAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGCATGTGTCTGGCgggg < 1:139433/238‑1 (MQ=255) ggCGGTGTTCCCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGCATGTGTCTGGCgggg < 1:843129/238‑1 (MQ=255) ctgtgtTTCCCCGTCAGGCTCCAGGCTTGTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGCATGTGTCTGGCGGGGGa < 1:918345/236‑1 (MQ=255) | ACAGATCCCCCATTTCTCCTCCGGGGAAGCGCATGGCGTCCGTCATCGACGTCAGCAGATGGCAGACTTTTCC‑TTTGCGCGTCACGGTCAGCAGGCGGGCAGTCACTTCATTTCCCAGTCCCGGCCACTTTTTTCGTGCCTGCGGGCTGGTTTTCAGCTTCACCAGATGATCGCCTTTACCCAGTTTTCTGATCTCTTCATATTGCGCTCCCTTTCTGAGAGGTATCATCCAGTGGCGGTGTTCTCCCGCCAGGCTCCAGGCATTTAACAGTCCCAGTGAGTAATAAC‑CTTTATCCATTAACGTCAGAGTGTTATCGCCGGTTTGTTCTATAAGTTGCTCAGCAAGCTCATTTTCGCTGTTCTTCATCGTGCCGAAGGCTGCAGCCGTCAGCAGATGGCTGGTCAGTTCCATCTGGCAGACCATTTTGACCTGCGGGTAGAGCGCCGGGTTCCCGGCATGTGTCTGGCGGGGGA > NC_000913/4502513‑4502986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |