| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,614,395 | T→C | 8.2% | intergenic (+135/+285) | yjjV → / ← yjjW | putative DNase/putative pyruvate formate lyase activating enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,614,395 | 0 | T | C | 8.2% | 135.2 / 4.6 | 49 | intergenic (+135/+285) | yjjV/yjjW | putative DNase/putative pyruvate formate lyase activating enzyme |
| Reads supporting (aligned to +/- strand): ref base T (31/14); new base C (2/2); total (33/16) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.50e-01 | |||||||||||
GCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTG‑CCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACA > NC_000913/4614159‑4614605 | ctcggggtgtTGCCCGTTTTTTGCGGGTTGCGGCGGGAACCGGGGGGTGGGATTGCCGAAGCGTGGGTTAA‑AACACCGGATGCGTGGTTTAACGGGCGGTGGGCCGGATAAGGGGTTCCCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTgg < 2:145257/233‑1 (MQ=17) tGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGCCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCCCAATGCCTGATGcacc > 1:784392/1‑235 (MQ=255) ttggcccGGGACCCGGGGGGTGGGATTGGGCAAGGGTTTGTTAATAACC‑GGTATCCTGTGTTTAACGTGCCGGAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCAAAAGGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTc < 2:877008/234‑1 (MQ=17) ttGGGCCGGGAACCGGGGGATGGGATTGCGCAAGCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGt < 1:340360/238‑1 (MQ=255) tGCGCCGGGAACCGGGGGATGAGATTGCGCAAGCGTTGCTTAATAACC‑CGTATCCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTc < 1:845375/238‑1 (MQ=255) tGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCttttgc > 1:89562/1‑235 (MQ=255) aCCGGCGGATGGAATGCCGTAAGCGGTGTTTAATACCA‑CGTAAACGTTGTTTAACGTGCCGTAGGCTGGATAAGTCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCTTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATc < 1:345057/238‑1 (MQ=17) aCCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACA‑CGTATACGGTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATc < 1:227303/238‑1 (MQ=255) ggtggtaTTGCCCAAGCGTTGCTTAAAAACA‑CGTATACGTTGTTTAACGTGCGGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTa < 1:602708/232‑1 (MQ=255) tGCGCAAGCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGGTGCGACGCTTTTCGCGGCCTAACATGCCTCCAAGTCtgt > 1:679593/1‑239 (MQ=255) gCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCAACAAGTCCGTGCCGaa > 1:138776/1‑238 (MQ=255) tGCTTAATAACA‑GGTTGACGTGGTTTAACGGGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGt < 1:676232/238‑1 (MQ=255) ttAAAACCA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAgg < 1:578513/238‑1 (MQ=255) cGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCCCGCCGCATCCGGCAGTTGGCCCACAATGCTCGATGTGACGCTTGTCGCGTCTTATCATGCCTAGAAGTCTGTGCCGAACCGTAGGCCGGATacg > 1:796369/1‑236 (MQ=255) ataCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGATTGCGCACAATGCCTGATGCGACGCTGGTCGCGTCTTATCTTGCCTACAAGCCTGTGCCGCACCGTAGGcccgtcccttat > 1:859329/1‑228 (MQ=17) taCGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTTGGCCGAACCTTAGGCCGGTTAAGGCGt > 1:486948/1‑238 (MQ=255) tgttTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTTGGCCGAACCCTAGGCCGGATAAGGCGTT‑CAcg > 1:808966/1‑238 (MQ=255) tgttTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGAGCACAATACCTGATGCGACGCTTGACGCGTCTAATCATGCCTACAAGTCTGTGCCGAACCGAAGGACGGCTAAGGAGTT‑CAcg > 1:914112/1‑238 (MQ=14) tgttTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACACGTTTTTACCGACCCGTAGGCCGGATAAGGCGTTCACCCCGCATCCGGCAGTTGTCGCCCAATGCCTGAGGCCACGCTTGTCGCGTCTTATCATGCCAACATGCCTGGGCCGCACCGTAGACCGGCAAAAGCGTT‑CAcg > 2:315100/1‑238 (MQ=14) tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGcac > 2:317325/1‑157 (MQ=255) tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGcac < 1:317325/157‑1 (MQ=255) tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACaa > 1:15058/1‑199 (MQ=255) tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTTTGCCGAACCGTAGGCCGGATAAGGCGTT‑CAcgcc > 1:180665/1‑238 (MQ=255) tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCCTAGGCCGGATAAGGCGTT‑CAcccc > 1:464130/1‑238 (MQ=255) tttAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGCCTTTGCCGAACCGTAGGCCGGGTAAGGCGTT‑CAcgcc > 1:151437/1‑238 (MQ=255) tAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACACTGCCTGATGCGACGCTTTTCGCGTCTTCTCATGCCTACAACGTTGTGCCGCACCGCAGGCCCGGAACGGCGTT‑CAccccccc > 2:553881/1‑236 (MQ=14) cGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGa > 2:50877/1‑166 (MQ=37) cGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGa < 1:50877/166‑1 (MQ=37) gCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGc < 1:785141/154‑1 (MQ=21) gCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGc > 2:785141/1‑154 (MQ=21) gATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACCCTTGTCCCGTCTTATCATGCCTCCAAGCTTGTGCCGACCCGAAGGCCGGAAAAGGCGTTACAC‑CCGCACACGGCAGGCGGCGCaa > 2:164417/1‑238 (MQ=14) aTAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCCCATCCGGCAGTTGGCGCACACTGCCTGATGCGACGCTTGTCGCCGCTTAGCATGCCTACAAGTCTGTGCCGAACCGCAGCCCCGATAAGGCGTT‑GACCACCCATCCGCCAGT‑Ggcgcccaa > 2:158778/1‑235 (MQ=14) cGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGAAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGTTAAGGCGTT‑CCCGCCGCATCCGGCGGTCGGCGCATAAAGCCt > 1:237133/1‑239 (MQ=255) cgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGTGACGCTTGTCGCGTCTTATCATCCCTCACAGTCTGGGCCGAACCGTAGGCCGCATAAGGCGTT‑CACCCCCCATACGGCAGTCGGCGCATAAGGCCCGAcgcggc > 2:680915/1‑236 (MQ=14) tcggCGCATAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGCCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGCCt > 1:108911/3‑239 (MQ=255) gcAAAATGCCTGATGCGACGCTTAACGGGTCTTTCCAGGCCTACAGGTTTGGGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATc < 1:588896/238‑1 (MQ=255) cacaAGGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCa < 1:357671/238‑1 (MQ=255) tGCCTGAGGCGACGTTTAACGCGTCTTACCATCCCTACATGTTTGGCCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTa < 1:680915/239‑1 (MQ=255) ccTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTG‑CCGAACCGTAGGCCGGATAAGGc > 1:643027/1‑239 (MQ=255) cAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTTTCGCGTCTTTTCATGCCTACAGGTTTTTG‑CCGCA‑CGTAGGCCGGATAAGAGGTTc > 1:19059/1‑238 (MQ=255) ttGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCCTAATGCCTGATCCGACGCTTGTCGCGTCTGTTCCTGCCCACCGGTTTGTG‑CCCAACCCCAGGCCGCGAAAAGCG‑TCGcgccg > 2:227671/1‑239 (MQ=14) tgtgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGACGCATCCGGCAGTCGGCGCATAATGCCTGAGGCGCCGCTTGTCGCGTCTTATCATCCCGCCA‑GTTTGTGTCCGCACCGCAGGCCGCTAAAGGCGtcgccccca > 2:625580/1‑231 (MQ=14) aaCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCAt > 2:350090/1‑83 (MQ=38) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCg < 1:813177/139‑1 (MQ=255) tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCg > 2:813177/1‑139 (MQ=255) gATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGcc > 2:655086/1‑100 (MQ=40) aTAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTCTCAGTCCTACAGGTTTGTG‑CCGAACCCTGGACCGGAAAAGGCGTGCCCGCCCCATACGGCAGTGGGCGcaaa > 2:824614/1‑237 (MQ=14) aTAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCACGCCTACAGGTTTGGT‑CCGAACCGCAGGCCGGATAAGGCGTTCGCGCCCCCACCGGCAGTTGGCCcaca > 2:569577/1‑239 (MQ=14) cACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGt > 1:80554/1‑47 (MQ=35) ttGGCGCGCAATGCCTGAGGCGGCGCTTGTCGCGTCTTATCATGCCTACAAGTCTGAGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGt < 2:842995/136‑1 (MQ=255) | GCCCGTGTGTTCGCCGTGCTTTGCGAGTTGCGCCGGGAACCGGCGGATGAGATTGCGCAAGCGTTGCTTAATAACA‑CGTATACGTTGTTTAACGTGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTAACGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTT‑CACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTG‑CCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACA > NC_000913/4614159‑4614605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |