| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 983,900 | A→G | 12.6% | E84G (GAG→GGG) | ycbL → | putative metal‑binding enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 983,900 | 0 | A | G | 12.6% | 206.3 / 3.4 | 80 | E84G (GAG→GGG) | ycbL | putative metal‑binding enzyme |
| Reads supporting (aligned to +/- strand): ref base A (18/50); new base G (9/2); total (27/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.38e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGGTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCGGAGTAGGGCGCAGTG > NC_000913/983668‑984133 | ccGGTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGGCGGTTTTCGGCCCGGAAAAAA‑GAGATGA‑GTTCTg > 1:956282/1‑239 (MQ=255) ggTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCACAACA‑TTACGGGGGGCCGGGTTTTGGCCCGGGGAAAG‑AAGATGA‑GGTCTGGc > 1:88031/1‑239 (MQ=255) gTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGGTTTCGGCCCGGAAAAAA‑AAGAGTG‑GTTCTgggt > 1:370066/1‑237 (MQ=255) cGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCACCTGGACCACGTTGGCGCAGCGGCGGAACTGGGGCAACATTTACGG‑GTGCCGGGTTTCGCCCCGGCGAAAA‑AAAAGGA‑GATCTAGCGCCAAg > 2:54100/1‑239 (MQ=255) ccATTTTCCCAGAACTTTTCATTAATCGGGGGTGAACAAACCCGGCTGGCCGCACTGGGCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAgg < 2:609119/238‑1 (MQ=255) cccAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTGGGCCCGGAAAAAG‑AAGATAA‑GTTTTGGGTGCAAGGGTTg > 1:960009/1‑236 (MQ=255) aCTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCaa < 1:504123/239‑1 (MQ=255) aCTGGTCATTAATCCGGGGTGAACAAGCCCGGCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGCCCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCACGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCa < 1:1071228/238‑1 (MQ=255) gTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCt < 2:252356/213‑1 (MQ=255) gTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATAG‑GTTCt > 1:252356/1‑213 (MQ=255) gTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGGTTTCGGCCCGGGAAAAG‑AAGAAGA‑GGTCTTGCTGCAAGGCTTGCCTGCGCCAAga > 1:366307/1‑238 (MQ=255) gTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGCTTTCGGCCCGGGAAAAG‑AAGATGG‑ATTCTCGCCGCAAAGCTTGCCCGCGCCAAgg > 1:903719/1‑238 (MQ=255) tCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGGAAAAG‑AAGGTGA‑GGTCTGGCTGCAAGGGTTGCCTCCGCCAAGACg > 1:1054841/1‑239 (MQ=255) tCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGGAAAAG‑AAGATGA‑GATCTGGCTGCCAGGCTTGCCTGCGCAAAGTCg > 1:796279/1‑239 (MQ=255) tCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGGTTTCGGGCCGGAAAAAGAAAGAT‑A‑GTTCTGGCTGGAAGGGTTGCCTGCGCAAAGTCg > 1:858880/1‑239 (MQ=255) acttggttggAACAAACCCGTCTGGCCGCGCTGGTGGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGCCAGCGGCCTGACACTGATGCAGATCCTGCGGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGtt < 2:102575/230‑1 (MQ=255) accgggTGTGAACAAACCCGGTGGGCCGCACGGGTCGGCCCGGGGGGCGATGCGGAAAAAATCAAACAGGAAGGTGATGACAGCGGCCTGACACTGATGCAGATTCTGCTGACGCATGGTCATCTGGAACACGTTGGCGCAGCGGCGGAACTGGCGTAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTGCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATggt < 2:263683/235‑3 (MQ=255) tCTGGTGTGAACAAACCCGTCTGGCCGCATTTGTCGATCCTGGCCGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACGGCGGCCTGACCCTGATGCAGATCCTGCTGACGCATGGTCATCGGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGtt < 1:533626/238‑1 (MQ=255) cTGGGGTTAAAAAACCCGTCTGGCCGCAGTGGTCGACCCTGGCGGCGAGGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTg < 2:77340/239‑1 (MQ=255) ggTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGt < 2:499672/239‑1 (MQ=255) aCCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCCGTTTTCGGCCCCGGAAAAG‑GAGGTTG‑GGTCTGGCTGCAAGGGTTTCCTGCGCAAAGACGTATGGTTGGTCTGGacggga > 1:442650/1‑233 (MQ=255) aCCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCCCTTTTCGTCCCCGGCAAAA‑CAGGTGATTTTCTGG‑TGCAAGGCTTCACCGCCCACACGCGGATGTTTGGCTTGgaggaggg > 2:1045852/1‑237 (MQ=255) gCCGCACTTGTGGATCCCGGTGGGGTTGCGGAAAAAATCAACCAGGAAGTTGATGACAGGGGCCTGACGCGGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCt < 2:343803/239‑1 (MQ=255) gCCCCACTGGTCGATCCTGGCGGGGAAGCGGAAAAAATCAAAAAGGAAGTTGATGAAAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCt < 2:956282/239‑1 (MQ=255) gccaTGCGGAAAAAATCAAACAGGAAGTTGATGCCAGGGGCCTGAACCTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAAc < 2:370066/236‑1 (MQ=255) gATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GGTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGGAGAGTGCCAGCCGCTGACGCCCGATCGGTGGCTGGACgg > 1:878100/1‑238 (MQ=255) aTGCGGAAAAAATCAAACAGGAAGTTGAGGACAGCGGCCGGGCACCTGTGCCGAACCTGCTTACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑a < 2:235980/238‑1 (MQ=255) gCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAgg < 1:850663/239‑1 (MQ=255) aaaaaTCAAACCGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGGTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGAt < 1:537560/238‑1 (MQ=255) aaaaaTCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGAt < 1:339268/238‑1 (MQ=255) aagcAAACAGGAAGGTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCa < 1:660401/236‑1 (MQ=255) aaccAAACGGAAAGTTTTTGACAGCGGCCTGCCCCTGATGCAGATCCGGCTGGAGAGTGGTCATCTGGACCACGTGGGCGCAGCGGCGGAAACGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCGGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCa < 2:945168/236‑1 (MQ=255) aaTCAAACGGGAATGTGGTGAAAGCGGGCTGCCCCTGAGGCCAGTCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCa < 2:878100/239‑1 (MQ=255) aTCAAACAGGAAGTTGATGACAGCGGCCTGGCCCTGGTGCAGATCCGGCTGACGGATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCAt < 1:11203/239‑1 (MQ=255) aTCAAACAGGAAGTTGATGACAGCGGCCTGACGCTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCAt < 1:628649/239‑1 (MQ=255) tCAAACAGGAAGTTGAAGCCAGCGGACTGACACTGAGGCAGAATCTGGTGACGAATGGTCATCTGGACCACGTTGGCGCAGCGGAGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTGCGGCTCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATc < 1:1064757/239‑1 (MQ=255) aaGTTGATGCCAGCGGCCCGCCACGGATGCAGGTCCTGCTGACGCATGGTCATCTGGACCCCGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTGCGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATa < 2:1030961/236‑1 (MQ=255) aaGTTGATGACAGCGGCCTGGCCCTGATGGAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAgg < 2:731112/238‑1 (MQ=255) tgatgaCAGCGGCCGTACACTTATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAAtg < 1:575710/239‑1 (MQ=255) ggatgaCGGCCGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGGAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGaa < 1:22763/236‑1 (MQ=255) gatgaCAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAAtgt < 1:122343/239‑1 (MQ=255) gatgaCAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAAtgt < 1:1072463/239‑1 (MQ=255) gatgaCAGCGGCCGGACCCTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAAtgt < 1:453005/239‑1 (MQ=255) tgaCAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGGAAAAG‑AAGATGG‑GTTCTGGCTGCCAGGCTTGCCTGGGCAAAGGCGTATGTTTGGGTTGGAAGAGTGCCCACCCCGGACGCCCGATCGGTGGCTGAACG‑CAGGAGACACCATCAACAAAGGGaagagg > 2:964031/1‑234 (MQ=255) cGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCCGTTTTCGGGCCGGGAAAAA‑AAGATGG‑GTTCTTGCTGCAAGGCTTGCCCGCGCAAAGTCGTATGTTTGGTCTGGACAAGTGCCAACCCCCGAACCCAGATCCGTGGCTGGACG‑AAGGGGGTAACATCAACCAAGGGAAGGG‑GGCTTTaa > 2:1072463/1‑238 (MQ=255) ggCCTGACCCGTATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTAc < 1:968940/238‑1 (MQ=255) ggCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTAc < 1:811830/238‑1 (MQ=255) ggCCGGGCAGTGATGCAGGTCCTGCTGAGTGATGGGCGTCTGGGCCCTGTTGGCGCACCGGAGGAACGGGCGCAACA‑TTACGGCGGTGCGGTTTGCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTAc < 2:903719/238‑1 (MQ=255) ccTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGtt < 1:145895/153‑1 (MQ=255) tGACACTGATGCAGACCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGgtg < 1:401167/239‑1 (MQ=255) tGACACGGATGCAGATCCTGCTGACGCATGGTCAGCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGgtg < 1:543820/239‑1 (MQ=255) gACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGGGAAAG‑AAAGTGG‑ATTCTTGCTGCAAAGCATGCCTGCGGAAAGGCGGAATGTTGGGCTGGAAGACGGGCAGCCCGTTGCGGCCGATCGTTGGCTGTACGCAAGGCAACACCACCAGAACA‑GGCATGG‑GACTTTaacggggt > 2:113848/1‑232 (MQ=255) cTGATGCCGGTCCTGCTGACGATTGGTCCTCTGGCCCGCGTTGGCGCAGCGGCGGAACTGGGGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACa < 2:858880/239‑1 (MQ=255) cTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACa < 1:1052331/239‑1 (MQ=255) aTGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCCGATCGTTGGCTGAACG‑AAGGCGAGACCCTCAGCATAGGGAATGT‑GACTTTTCAGGTGTTACAtt > 1:671274/1‑238 (MQ=255) aGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGccc < 1:613137/238‑1 (MQ=255) ccTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGGCCAAAGGCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGCCGCCAGCTCTGTGGCTGAACG‑AAGGGGAGACAAACAGAATAGGGGAAGTAGACTTAACA‑GTGGTAAAGTGCCCggggg > 2:500343/1‑238 (MQ=255) ctgctgtggattGGTCATCTGGACCCCGTTGGCGCGGGGGGGGAACTGGCGAAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCa < 2:366307/228‑1 (MQ=255) ctgACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTgg < 1:629492/171‑1 (MQ=255) tgACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACg < 1:452765/239‑1 (MQ=255) gACGCCTGGTCATCTGGACCACGTTGGCCAAGGGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGc < 1:1045852/239‑1 (MQ=255) aTCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGG‑GGTCTGGCTGCAAGGCTTGGCTGCGCCAAGTCGGATGTTTGGGTTGGGAGAGCGCCAGCCGCTGGCGCCCGATCGGTGGGTGGACG‑AAGGCGAGACCATCAGCCAAGGGGAAGG‑GGCATTTCAGGTGTTAAAATGCCCCGGGGATAAACCggggcgtggg > 2:1038779/1‑232 (MQ=255) gACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATa < 1:167191/180‑1 (MQ=255) cACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGtt > 2:333450/1‑110 (MQ=255) cACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGtt < 1:333450/110‑1 (MQ=255) gTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGccc < 1:1094489/206‑1 (MQ=255) gTTGGCCCCGCGGCGGAACTGGGGCAACA‑TTTCGGGGGGCCGGTTTTCGGCCCGGAAAAAG‑AAGAAGG‑GTTCTGGCTGGAAGGCTTGCCTGCGCAAAGTCGTATGGTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTtga < 2:1052127/239‑1 (MQ=255) cA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGc < 1:466797/184‑1 (MQ=255) ttACGGCGGGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCg < 1:883740/239‑1 (MQ=255) cGTGCCGGTTTTCGGCCCGGGAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGGATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGGCATGTCGGGTTTTTTGATGATCGGGCAAAGCTGCTGATTTTTGGCGATGTTa > 1:651428/1‑239 (MQ=255) tGCCGGTTTTCGGCCCGGGAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGAATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCCTAGGGGAAGG‑GACTTTTCAGGGGTTAAATTGCCCTGGGCAAACGCCcgg > 2:466797/1‑184 (MQ=255) tGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGGCGTATGTTTGGGCTGGAGGAGGGCCCGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGGTACCCTCCGCATAGGGAATGT‑GAGTTTCCCAGGGGTACATTGCCCGGGGACTACACCCGGGCATGTCGGGGTTTTTGTTGAGTGGGCAAAGGGGGTGTTTTCTggggcgtttatt > 2:351193/1‑229 (MQ=255) tGCCGGGTTTCGGCCCGGGAAAAG‑AAGATGG‑GTTCTGGCTGCAAGGCTTGCCTGCGCCAAGTCGGATGGTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCCGCATAGGGCATGG‑GACTTTACAGGTGGTACATTGCCCTGTGCATACACCAGGGCATAGCGTGTTTTTTGTTGATCGGGCAAAGCTGCTGAATTCGGGGGTGGTTAtt > 2:338723/1‑239 (MQ=255) ccGGTTTTCCGCCCGGGAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCGTGCCTGCGCAAAGTCGTATGTTTGGTCTGGGAGAGGGCCAGACGCTGACGCCCGATCGGTGGCTGAACC‑GAGGGGGTACCATCACCCTAGGGAATTG‑GACTTTTCAGGGGTTAACTTGCCCCGGGGCAACGCCGGGTCATGGCGGGTTTTTTGATTTTCGGGGAAAGCTGCTGATTTTTGGGGGGGTtttttt > 2:1041778/1‑239 (MQ=255) cGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTAtttt < 1:113848/238‑1 (MQ=255) ggTTTTCGGCCGGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTc < 1:423324/238‑1 (MQ=255) tggCCCGGAAAAAG‑AAGGTGT‑GTTCGGGCTGCAAGGCTTGCCTGGGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATCCCAGCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCg < 2:960515/238‑1 (MQ=255) cGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCGGAGTa < 1:1000970/239‑1 (MQ=255) aaaG‑AAGATGG‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCGGAGTAGGgcg < 1:975652/239‑1 (MQ=255) aTGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTTTTTTCAAAGGGGGAGTAGGGGGCAggg > 2:611060/1‑235 (MQ=255) | CCGGTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACA‑TTACGGCGTGCCGGTTTTCGGCCCGGAAAAAG‑AAGATGA‑GTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACG‑AAGGCGATACCATCAGCATAGGGAATGT‑GACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCGGAGTAGGGCGCAGTG > NC_000913/983668‑984133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |