| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,126,971 | T→G | 13.6% | T74P (ACC→CCC) | wcaG ← | bifunctional GDP‑fucose synthetase: GDP‑4‑dehydro‑6‑deoxy‑D‑mannose epimerase/ GDP‑4‑dehydro‑6‑L‑deoxygalactose reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,126,971 | 0 | T | G | 13.6% | 167.3 / 2.5 | 69 | T74P (ACC→CCC) | wcaG | bifunctional GDP‑fucose synthetase: GDP‑4‑dehydro‑6‑deoxy‑D‑mannose epimerase/ GDP‑4‑dehydro‑6‑L‑deoxygalactose reductase |
| Reads supporting (aligned to +/- strand): ref base T (25/30); new base G (10/3); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.33e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCACAGTTTGATCCCGGCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATG > NC_000913/2126749‑2127191 | cGCACAGTTTGATCCCGGCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCACCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTTCCCGTTTCCGGTAGATGCAGGACGATCCGAGAAACC‑GCCGTTTGTTCACGTCGGTCTGATGCCCCGCGTGAATGATGTTGCTCCCAATCATCATTTTTCTGTAAGA‑GAAATCCCCCGGATAGGGGGTGTTTGcaacaaa > 2:251350/1‑237 (MQ=255) aagaggTTTGATCCCGGCTATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCTTGCAACAACTCGCGTTCTGCCATCGGCTGGTTTGCCAGTTGCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGGGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATg < 1:680051/233‑1 (MQ=255) cGGCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCTGCGTGAATGATGTTGCTCTCAATCCTCC‑TGTTCTGGTATATGAAATACGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTcgc > 1:381220/1‑238 (MQ=255) gCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCCGTTTCCGGTAGATGCAGGGCGATCCGCGCAACA‑GCAGTTTGTTTACCTCGTTCTGATGCGCGCGGGGAATGAAGTTACCCTCAATC‑TCACTGTTTTGGTGGGTGAAATGTCCCGGGTAGGGGTTGTTGCAAACAAACCACCCCACTTTtgcccc > 2:1032691/1‑237 (MQ=255) gCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTTATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGGTGAAATCCGCCGGATAGGGGTTGTTGGCAACAATGCCGCCCACTTTcgccg > 1:453224/1‑238 (MQ=255) gCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTTTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGTTAGGGGTTGTTGGCAACAATGCGGCCCCCTTTcgccg > 1:827323/1‑238 (MQ=255) cggttttGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTcgccgc < 1:923265/235‑1 (MQ=255) ttttttGGCAATAGCATTAGGTTCGTTAGTGGGTTCCAGCGTGCCCTGCAACAACTCTCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTcgccgccg < 2:960844/237‑1 (MQ=255) ttgtaaTGGCATTAGGCTGGTTTGTCGGGGCCAGCGTGCCCTGCAACAACTCGGTTTCTGCCATCGGCTGTTTTGCCCGTTGCGGGGAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGa < 2:827323/235‑1 (MQ=255) tGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGa < 1:764216/239‑1 (MQ=255) tagtctAATGCTCGTTTGGCGGCCCCCGCGGTCCCTGCAACAACCCGTTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGAcc < 2:796881/234‑1 (MQ=255) aGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCCCCGGATAGGTGTTGTTGGCAACAATGCCCCCCCCTTTCGCCCCCCCCCGATAGACCTGGTCaa > 1:238390/1‑239 (MQ=255) cGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGGAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTTACGTCGTTCTTGTGCGGGGCGTGAATGAGGTTTCTCTTGATCCTCA‑TGTTCTGGTAGATGAAATACCCCCGGTAGGGGTTGTTGGCAACAAATGCGCCCACTTTCCGCGCCCCCCGCAAGACCGGGtacaaagat > 2:661578/1‑231 (MQ=255) gTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGTCAGTTTCGGGTAGATGAAGAACGAACCGTGAAAAA‑GCAGGTTGTTCACGTCGTTCTGATGGGCGGCGCGAATGATGTTGCTCTCAATCATAA‑TGTTATTGAAGATGAGATCCGCCGGAAAGACATTGTTGGCAACAAAGCCGCCCACTATCGCCGCCGCCAGAGAGACCTGGTcctggctct > 1:110171/1‑231 (MQ=255) gTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATTCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTTGTAGATGAAATCCGCCGGAAAGGTGTTGTTGGCAACAATGCCGCCCCCTTTCGCCGCCGCCAGATAGACCTGGGCAATACGt > 1:559179/1‑238 (MQ=255) tAGTCGGCTCCAGCGGGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCg < 1:879759/239‑1 (MQ=255) tCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCCGATAGACCTGGTCAATACGTTCGCTGGCaaa > 1:1021856/1‑239 (MQ=255) ccATCGGGCCCTGCAACAACTCGCTTTCGGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATTCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAg < 1:591249/239‑1 (MQ=255) ccAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAg < 2:1021856/239‑1 (MQ=255) cccTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGGGTTGTTGGCAACAAAGCCGCCCACTTTCCCCGCCGCCAGATAGACCTGGGCACTACGTTCGCCGGCAAAGAAATCAt > 1:441820/1‑238 (MQ=255) cccTGCAACAACTCGCTTTCTGCCATCGGCTGCTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCCCGTCGTTCTGATGCGCGGCGGGAATGATCTTGGTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGGGTTGTTGGCAACAATGCCGCCAACTTTCGCCGCCCCCAGTTAGACCTGGTTCATCCGCTCGCTGGCAAAGAAATCAt > 1:740223/1‑238 (MQ=255) caacaaCTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACgg < 1:463826/239‑1 (MQ=255) acTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCCGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACCGcccg > 1:966828/1‑238 (MQ=255) acTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGGGTTGTTGGAAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCAGTACCGGCGCgg > 1:110300/1‑239 (MQ=255) cTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGGAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGGGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGt > 1:984485/1‑200 (MQ=255) cTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTcgc < 2:543886/180‑1 (MQ=255) cTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTcgc > 1:543886/1‑180 (MQ=255) cGCTTTCTGCCATCGGCTGTTTTGCCAGGTTTGGGAAGATGTAGCAGGATCCCTGAAACA‑GCCGCTTTTTCACGGCGGTCTGAAGCGCCGCGGGAATGATGTTGCTCTCACCACTCA‑TGATCTTGGGGATGAAAACCGCCGGGTAGGGGTTGTTCGCAACCAAGCCCCCCCCTTTCCCCCCCCCCCGATAGGCATGGTCAATACGTACCCCGCCCAAAAACACATGCACgggcggggtg > 2:581863/1‑231 (MQ=255) gttttCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAg < 1:818082/215‑1 (MQ=255) cTGCCATCGGCTTTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCcagc < 1:661578/239‑1 (MQ=255) cTGCCATCGGCTTGTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCcagc < 1:956519/239‑1 (MQ=255) ccAGTTTTGGGTTGATGGGGGACGGTCCGAGAAACT‑GGAGTTTGTTCACGTCGTTCTGATGCGGGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCgg < 2:1078271/239‑1 (MQ=255) ccAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGGCAATACGTTCGCTGGCAAAAAAATCATGGACGGCCGGGCTGTCCAGCAGGTTCAGCtcgcgccgg > 1:692194/1‑233 (MQ=255) tCGGGTGGATGCAGGCCGTTCCGGGAAACG‑GCAGTTTGTTCACGTGGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGt < 2:453224/239‑1 (MQ=255) aggtGCAGGGCGATCCGAGAAACC‑GCAGTTTGGTCACGTCGTTCTGATGCGCGGCGGTAATGATGTTGCTCCCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATAc < 1:950202/235‑1 (MQ=255) aTGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTTGCAACAATGCCGCCCACTTTctc > 2:625284/1‑138 (MQ=255) aTGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTcgc < 1:625284/140‑1 (MQ=255) aTGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGCTAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAg > 1:1024258/1‑239 (MQ=255) gACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGGGCGTAATACCAGTTCcac > 1:926057/1‑239 (MQ=255) gACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGCCAATACGTTCGCTGGCAAAACAATCATGCACGCCCCGGCTGTCCACCCGGTTCAGCTCCTCCCGGGTGCGAAAACCCAGTTCcac > 2:842418/1‑239 (MQ=255) gagaAACA‑GCAGTTTGGTCACGTCGTTCGGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACcgc < 1:570521/239‑1 (MQ=255) gaAACAGGCGGTTTG‑TCACGGCCTTCTGATGCGCGGCGTGAATGATTGTGCTCTCAATCATCA‑TGTTCTGGTTGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACcgcg < 1:1027418/238‑1 (MQ=255) gaAACA‑GCAGTTTGTTCCCGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACcgcg < 1:251350/238‑1 (MQ=255) tttGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGa > 1:633342/1‑236 (MQ=255) ttGTTCACGGCGTTCTGATGCGCGGCGTGAAGGATGTTGCTCTGAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAg < 1:789163/236‑1 (MQ=255) tCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGGTTTGTTGGCAACAATGCCGCCCACTTTCGCCCCCGCCAGATAGACCTGGTCAAGACGTTCGCTGGCAAAGAAATCATGCACGGGACGGCGGTCCAGCAGTTTCAGCTCTTCGCGGGTGCGCAAAACCAGTTCGACACCCCCGGGCTGTTccgacggccc > 2:810104/1‑229 (MQ=255) gtcgtTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACCTCACCGCCCTGTTCGAGCTGCCGCCTGa > 1:51330/1‑239 (MQ=255) ctcggcgTGAATGTTTTTTCCCTCAATCACCT‑TGTTCTGGTTGATGAAATCCGCCGGATAGGTGTTGTCGGCAACAATGCCGCCCCCTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGa < 2:968809/237‑1 (MQ=255) gcggcgTGAATGATGTTGCCCGCAATCCACA‑TGTTCCGGTAGAGGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGa < 1:581863/238‑1 (MQ=255) cggcgTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGAcc > 1:968809/1‑239 (MQ=255) gcggtaaTGATGGTGTTTTTAATCATCA‑TGTTCTGGTAGAGGAAAGCCGCCCGATGGGGTTTGTTGGCAACAATGCCGCCCCCTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGGCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCAt < 2:238390/234‑1 (MQ=255) gttaagtgtgTTGCTGTTAATCAACA‑TGGTTCGGTAGATGAAAACCGGCGGATTGGGGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGACAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATc < 2:51330/230‑1 (MQ=255) gccccaaaTCGTCA‑TGTTCTGGTAGATGGAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCTGATAGACCTTGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGGTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAg < 1:626804/233‑1 (MQ=255) agtctcAATCATCA‑TGGTCGGGTAGATGAAATCCGGCGGAAGGGTTGTGGTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGGTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAg < 2:990262/237‑1 (MQ=255) ctctCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGCCCCACCCCCGATGACCAGc > 1:840526/1‑239 (MQ=255) ctctCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCCCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGACCTGCCGCCTGATGGCGGAACCGACCATCCCCCGATGCCCAGc > 1:6722/1‑239 (MQ=255) aaTCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGCCCTGGTCAATACGTTCGCTGGCAAAGAAATCATCCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGGGCGCAATACCAGTTCCCCCTCCCCGCGCTGTTCGAGCTGAGTCCTCATGGCGGAACCCACCCTCCCCCGATgccacaccaaaa > 2:904046/1‑228 (MQ=255) aaTCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCggg < 2:1063116/155‑1 (MQ=255) aaTCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCggg > 1:1063116/1‑155 (MQ=255) a‑tGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCCCGATGACCAGCAATAAAAAc > 1:990262/1‑236 (MQ=255) ttCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCgttg > 1:956819/1‑239 (MQ=255) ttCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCCCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCACCCCCCGACAACCAGCAAAAAAAAACCgttg > 2:1013724/1‑239 (MQ=255) gTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGGGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCGGATGGCGGCACCGACCATCCCCCGAGGACCACGAATAAAAACCCGTTGtttc > 2:689108/1‑237 (MQ=255) gTAGATGAAATCCGCCGGATAGGGGTTTGTGGCACCAATGCCGCCCCCTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTAc < 2:110346/239‑1 (MQ=255) tAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCgg > 2:184964/1‑138 (MQ=255) tAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCgg < 1:184964/138‑1 (MQ=255) aaaTGAAATCCGCCGTGTGGGTGTTGGTGGCAACAATGCCCCCCACTTTCGCCGCCGCCAGATAGACCTGGGCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACt < 2:956819/236‑1 (MQ=255) gATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTc < 1:689108/238‑1 (MQ=255) tGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATg > 1:110346/1‑239 (MQ=255) tgttggTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATaaa < 1:908533/202‑1 (MQ=255) | CGCACAGTTTGATCCCGGCGATTTTGGCAATAGCATAAGGCTCGTTAGTCGGCTCCAGCGTGCCCTGCAACAACTCGCTTTCTGCCATCGGCTGTTTTGCCAGTTTCGGGTAGATGCAGGACGATCCGAGAAACA‑GCAGTTTGTTCACGTCGTTCTGATGCGCGGCGTGAATGATGTTGCTCTCAATCATCA‑TGTTCTGGTAGATGAAATCCGCCGGATAGGTGTTGTTGGCAACAATGCCGCCCACTTTCGCCGCCGCCAGATAGACCTGGTCAATACGTTCGCTGGCAAAGAAATCATGCACGGCGCGGCTGTCCAGCAGGTTCAGCTCGTCGCGGGTGCGTAATACCAGTTCCACATCACCGCGCTGTTCGAGCTGCCGCCTGATGGCGGAACCGACCATCCCGCGATGACCAGCAATAAAAACTCGTTGTTTACTCATG > NC_000913/2126749‑2127191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |