| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 665,104 | A→C | 10.2% | S29R (AGT→AGG) | rlpA ← | septal ring protein, suppressor of prc, minor lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 665,104 | 0 | A | C | 10.2% | 212.3 / 3.1 | 80 | S29R (AGT→AGG) | rlpA | septal ring protein, suppressor of prc, minor lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (41/29); new base C (3/7); total (44/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCG > NC_000913/664870‑665336 | ctcgccttgttTCGGATGGAATGCTCCCCCGGGGGCCGTGAGGTTCGCGCCGGTTTGGGCCTTATGGGTTCCCCCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCGGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCATCTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa < 2:773742/232‑1 (MQ=255) aGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCATTGGTTCGAAACGCGGTTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGAAGGCTGCGGTACACTTACCg > 1:138623/1‑238 (MQ=255) gCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGCGACGGATCCTGCACGCTTTTGTAGCTTTTACCGTCGCCCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGCCCCCCCCGCTAATTTCACCTATAGGGCGCGTACATACCCACGGCTCCGGCCCACTTACCgc > 2:157616/1‑237 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGCTTTTGTAGCTTTTACCGTCGCGCTGGTAATCCCGATTTGCCGTCACGTTCCTGGGTTCGAAACCGCGGTCCGCCCCGCTAATTTCAACTATAGGCCCGTTACATACCCCAGGCTCCGGTCACCTTACCGCCTGtt > 2:666444/1‑239 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCCCAGGCTGCGGTACACTTACCGCCTGtt > 1:174811/1‑239 (MQ=255) tgtCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGGCCGCCCCGCTAATTTCAACTATAGGGCCGTTAAAAACCGCAGGCTGCGGTCCACTTACCGGCCGtt > 2:54107/1‑239 (MQ=255) tCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCCCAGGCTCCGGGACCATTACCGCCCGTTGCTGAcc > 2:257146/1‑239 (MQ=255) aaTGTTTCCCCAGGGGCCGTCAGGTTACCGCCGGGTTCGGAATCAATGTTTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc < 1:257146/239‑1 (MQ=255) aaTGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACCCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCCGGCTGCGGTACACTTACCTTCTGTTGCTGACcatc > 1:955059/1‑239 (MQ=255) ttGCTCCGCCGGAGGCCGTCAGGTTACGGCCGGGTTCGGCATCATAAGTTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc < 1:371668/237‑1 (MQ=255) atgccgcGCCGGGGGCCGTGGGGTTACGGCCGGGTTGGGCATAATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc < 1:157616/232‑1 (MQ=255) tgtctccccAGGGGGCGTCGGGTTGCCGCCGGGTTCGGCTCAATGGATTGCCCGCGGGCCCGCCTGGGTAAACCGAGCCGGATCCTGCCCGTTTGTGTAGCTTTTCCCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatcat < 2:188926/232‑1 (MQ=255) ttCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCCCAGGCTGCGGTCCACTTCCCGCCTGTTGCTGACCatcatc > 1:968806/1‑237 (MQ=255) tCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCt > 1:662410/1‑239 (MQ=255) cGTCAGGTTACTGCCGAGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAAACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGAAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGCCTGTTGCTGACCATAATCCCTTGTACATTccc > 1:673887/1‑238 (MQ=255) tCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTCTAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGcccc > 1:548844/1‑236 (MQ=255) gtgcGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAAACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCcgc < 1:54107/235‑1 (MQ=255) tGCCCCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGcc < 1:568741/239‑1 (MQ=255) gtcctccATTCCCGCCTGGTTAAATCGTGAGGGATCCTGCCCGATTTTGTAGCTTTCACCGGCGCGCTGGTAACCCTGTTTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGcc < 2:132170/234‑1 (MQ=255) ccgccAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGCCCATCATCGCTTGTACATTCCGCGAGCATTCCTGCCGCGATGCGGATCCCGCGCCAc > 2:568741/1‑239 (MQ=255) ccgccAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCCCGATGCAGATCCCCGGCCa > 1:914248/1‑238 (MQ=255) ccAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACCATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGCCCATCATCCCTTGTACATGCCCCGGGCCTTCCTGCCCCGGTGCAAAACCCGCGCCAcg > 2:999243/1‑236 (MQ=255) gTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCCGGCTGCGGTACACTTACCGCCTGTTGCTGACCATCATCGCTTGTACATGCCGCGCGCCTTCCTGCCGCGCTGCAGATCCccacccacacctt > 2:291752/1‑233 (MQ=255) ccTGGCTAAATCGAGACGGATCCTGCACGAGTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGCTTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTCATTTCAACTATAGGGCCGTTACATACCGCAGGCCTCGGTACACTTACCGCCTGTTGCTTGCCATCCTCGCTTGTACAAGACGCGCGCATTCCAGCCCCGGAGCAGAGCCCACCCCACTACTTACGCaat > 2:544393/1‑237 (MQ=255) ggttAAATGGAGGCGGTTCCTTCCCGATTTTGTAGTTTTTACCGTCGGTCTGGTAACCCTGGTTGGCCTGCGGGTACGGTTGGTCGAAACGCGGGTCCGCCCCGTTAATTCCAACTATAGGGCCGTTACATACCGGAGGCTGCGGTACACTTACCGTTTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTgcg < 2:931103/236‑1 (MQ=255) ttAAATCGAGACGGTTCCGGCTCGATTTTGTAGCTTTTACCGTCGGGGTGGTAATCCTGATTTCCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCCGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTgcgc < 1:918795/237‑1 (MQ=255) cTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTAGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCGGTTGCTGACCATAATCCCTTGTAAATGCCCCACGCATTCCCGCCCCGTTCGACATCCCCCGCCACTCCTTACCCAATgcgc > 2:1082889/1‑238 (MQ=255) cTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGGAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACAAGCCGCGAGCATTCCTGCCCGGATGCAAACACCGAGACAATTCttcccaactcgcc > 2:150991/1‑227 (MQ=255) cTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGAAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCCCCGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATACCTTGTACATGCCCCGCTCATTCCCGCCCCGTGGCAGATCCCGACCCCCTACTTaaccctcgccg > 2:1006119/1‑228 (MQ=255) tAAATCGGGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTGCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCAc < 1:891441/239‑1 (MQ=255) aaaccggggcGGATCCGGCACGATTTTGTAGCTTTTACCGTCGCGCGGGTAATCCGGATTGGCCGTCGCGTTAAGGGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCAc < 1:291752/229‑1 (MQ=255) gaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc < 2:302848/161‑1 (MQ=255) gaCGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACcatc > 1:302848/1‑161 (MQ=255) gCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa < 2:336536/132‑1 (MQ=255) gCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTa > 1:336536/1‑132 (MQ=255) cACGATTTTGTAGCTTTTCCCGTGGCGTTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGGGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATCCCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGa < 1:666444/238‑1 (MQ=255) ttttGTGCCTTTTCCCGTGGCGGTGGTAACCCTTGTTTGCCGTCGCGTTCAGTTGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATGGGGCCGTTACAATCCGCAGGCGGCGGTCCCCTTACCGTCGGTTGCGGCCCATCATCGCTTGTCCATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTCCACGCTTTTCGACAACAt < 2:228753/239‑1 (MQ=255) tttGAAGCTTTTCCCAGCCGGTTGGTAAACTCGATTTGCCGCCGCTTCCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACAt < 1:238613/238‑1 (MQ=255) ttgggaGCTTTTACCGTCGCTCTGGTAATCCTGATTTGCCGTCGCGTTCAGGGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACAtt < 1:354856/234‑1 (MQ=255) tGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGGTGCAGATCCCCAGCCACTGCTTACCCATTGCGCACCCCTTACACGCTTTTCGAAAAAAttt > 2:367956/1‑238 (MQ=255) cTTTTACCGTCGAGCTGGTAATCCTGTTTTGGCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCtgt < 1:150991/239‑1 (MQ=255) tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTCCCGTCTGTTGCCGACCATCCTCGCTTGTACATGCCGCGGGCATTCCAGCCGCGCTGCAGATCCCCAACCCCCCCTTAACCATTGGGCCCCCCTTCACCGCCTTTCGCCAACATTTTCCTgggg > 2:741733/1‑239 (MQ=255) tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCcg < 2:76158/167‑1 (MQ=255) tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCcg > 1:76158/1‑167 (MQ=255) tttACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCCATGCTTCCGCATTGGGCCCCCCTTCCACCCTTTTCGACAAAATTTTcccgggg > 2:325975/1‑234 (MQ=255) cgcgCTGGTAATCCGTATTTGCCGTCGCTTTCAGTGGTTCGAACCGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTCCCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGAt < 1:999243/239‑1 (MQ=255) cTGGTAATCCTGATTTGCCGTCGCGTTCAGGGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCtg < 1:467999/224‑1 (MQ=255) gATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTTCCGCGATGCAGATCCCGAGCCACTGCTTACCCATTGCGCCCCCCTTACACGCTTTTCGACAACATTTTCCTCTGGGTGGGGATTGAAATTAAAAAccc > 2:118864/1‑239 (MQ=255) tttGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGc > 1:356408/1‑171 (MQ=255) tttGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCCCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCCTTGCGCCCCTCTTACACCCTTTTCGCCAACACTTTCCTGTGGGGGTGGATTGACATTCAAATcccaa > 2:1031448/1‑237 (MQ=255) gTTCAGTGGTTCGAAACGGGGGTCCGCCCCGCTAATTGCAACTATAGGGCCTTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTCCATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCAt < 1:1082889/238‑1 (MQ=255) gcgGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 1:367956/239‑1 (MQ=255) gcgGGTCCCCCCCGCTAATTTCAACTATAGGGCCTTTACATACCGCAGGCTGCGGTACCCTTACCGTCTGTTGCTGACCATCAGCGCTTGTACGTGCAGCGAGCATTCCTGCCGCTATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGa < 1:878907/239‑1 (MQ=255) cgGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACa > 1:729669/1‑203 (MQ=255) cgGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGACCCACTGCTTACGCATTTCGCACCTCTTACACGCTTTTCGACAACCTTTTCCTTTGGGTGTGGTTTGACATTACAATCCCCAACCCAACCACCAGCCAAATTAgctcgca > 1:1028105/1‑233 (MQ=255) tCCGCCCCTGTAACTTCAACTTATGGGCCTTTACCTCCCGCAGGCTGCGGTTCCCTTACCGCCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGAtcct < 1:344027/238‑1 (MQ=255) ccGCCCCGGTAATTTCAACTTATGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGAtcctc < 1:741733/238‑1 (MQ=255) ccGCCCCGCTAATTTCAACTATAGGGCCGTTCCCTCCCGCAGGCTGCGGTACCTTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGAtcctc < 1:794773/238‑1 (MQ=255) gCCCCGCTAATTTCAACTTTGGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCAt < 1:56474/239‑1 (MQ=255) cTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTACGCCCGACCCCCCATAACTg > 1:1073075/1‑238 (MQ=255) cTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAAACCCGAACCCCGCCCTCAGCACAATTAGGCCCGAcccccacaaacga > 2:1088690/1‑228 (MQ=255) tCAACTATGGGGCCGTTACCTCCCGAAGGCTGCGGTACACTTACCGGCTGTTGCTGACCATCACCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTg < 1:325975/239‑1 (MQ=255) taGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGCGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCgg > 1:71089/1‑239 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGCCATTACAATCCCGAACCCAGCCATCCGCACAATTAGCCCCGGCCCTCCAAAACTGACCAGGGGGAGCGGAAccccca > 2:571418/1‑237 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATc > 1:939496/1‑172 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAAtt > 1:912770/1‑196 (MQ=255) ttACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCACCCATCCGCACAATTAGCGCCGATCCACCATAAACGACCCGGGGGAGCGGAGCCCCTa > 2:702926/1‑239 (MQ=255) agaCCGCAGGCTGGTGTACATTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAAc < 1:550185/237‑1 (MQ=255) tACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATACGCCCAATTAGCGCCGATCCTCCTTACCt > 1:591987/1‑211 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa < 1:828454/171‑1 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCa > 2:828454/1‑171 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAg > 1:650626/1‑239 (MQ=255) cAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAACCATCAGCCCCATTTGCGCCGATCCTCCATAACTAACCAAGGGGAGCGGAACCCCAACAACCAGCaa > 2:955989/1‑238 (MQ=255) ggcttgggTACCCTTTCCGTTTGTTGCCTACCCTCAACCGTTGTACATGCCGCGAGCATTCCTGGCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGaa < 1:908821/233‑1 (MQ=255) gCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCtg > 2:825957/1‑135 (MQ=255) gCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCtg < 1:825957/135‑1 (MQ=255) gCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAAc > 1:158843/1‑230 (MQ=255) gaggTACCCTTACCGTCGTTTGCTGACCATCATCCCTTGTACATGCCGCGAGCATTCCTGCCGGGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATAc < 1:1031448/236‑1 (MQ=255) cGGTACACTTCCCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCg < 1:1088690/239‑1 (MQ=255) cGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACATCTTACACGCTTTTCGACACACTTTTCCTGTGGGTATGGATTGCCATTACAATCCCGAACCCAGCCATCAGACCAATTAACGCCGATCCTCCCAAAATGACCAATGGAGACGGAAACCCAAAAAACGGCAAAAAAcac > 2:550185/1‑237 (MQ=255) | CGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTTTTACCGTCGCGCTGGTAATCCTGATTTGCCGTCGCGTTCAGTGGTTCGAAACGCGGGTCCGCCCCGCTAATTTCAACTATAGGGCCGTTACATACCGCAGGCTGCGGTACACTTACCGTCTGTTGCTGACCATCATCGCTTGTACATGCCGCGAGCATTCCTGCCGCGATGCAGATCCCGAGCCACTGCTTACGCATTGCGCACCTCTTACACGCTTTTCGACAACATTTTCCTGTGGGTGTGGATTGACATTACAATCCCGAACCCAGCCATCAGCACAATTAGCGCCGATCCTCCATAACTGACCAGTGGGAGCGGAACCCCTACAACCGGCAGAATACCG > NC_000913/664870‑665336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |