Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 954468 | 954800 | 333 | 32 [31] | [27] 32 | focA/ycaO | formate channel/ribosomal protein S12 methylthiotransferase accessory factor |
TCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTG‑CCATGCCGAAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAGTCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCAAATAAAAATAAATTTTAAAAATTAACAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAAC > NC_000913/954229‑954675 | tcgccccaAGAGGAAAGCAAGTGCCGCCAACTGTTTTTG‑CCAGGCCGAGGGGTTTTGG‑CCCTGTGCCAGGGGTTGCTGTAAAAAAGAAGACGAATGCGA‑TGAGAATAAAACCCCCGGCGG‑TAACCGCC‑AAATAGAACGTCTTAA‑GCGGATGTTTCGTTGTTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTcaca < 2:269483/235‑1 (MQ=255) cAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTG‑CCATGCCGAAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATGGCC‑AGATAGAAAGTCTTAA‑GCGGAAGTTTCGTTGCTTTATAGA‑AACCCCCCCCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAAATCAAAAGGGTTGTAACCTTTCacac > 1:796566/1‑239 (MQ=255) ccccAGAGAGAAGCAAATGCCGCCAACCAGTTTTG‑CCATGCCGAAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGGTAGAAAGTCTTAA‑ACGGATGTTTCGTTGCTTTATAGA‑AACCCGCCCCTTCGGCCACCTTTGCCCTTGCAGCCGGAAGGAAAAAATTCAAAGGGGTTTCAGCCTTTCCACTaa > 1:1268126/1‑239 (MQ=255) aaGCAAATGCCGCCAACCAGTTTTG‑CCATGCCGAAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAAGCTTAA‑GCGGATGTTTCGTTGCTTTTTAAA‑TCCCCCCCCCTTCGGCCCCTTTTGCCATTGCCGCCGGAAGAAAAAAATCAAAAAGGTGGTCACCCTTTCCCCTAAATCCCTCttt > 2:776548/1‑239 (MQ=255) aaGAAAATGCCGCCAACCAGTTTTG‑CCATGCCGCAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGCTATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TCACTACC‑CAATAGACAAATTTTA‑GCGAGAGTTTCCTTGCATTATTCG‑CACCACGCTCTTTGTCCACTTTTGCCCTTTCAACCAGAGATAAAAAATTCAAAGGGTTATCAGCCTTCAACAAAACTCTCCCttt > 2:290818/1‑239 (MQ=255) aTGCCGCCAACCAGTTTTG‑CCATGCCGAAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAGTCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCCCTTTGGCCCTTTCAGCCGGAAGTAAAAAATTAAAAGGGGTGTTAGCTTTTACCCTAACTCTCCCTTTATTAAg > 1:612697/1‑239 (MQ=255) aacagtttttG‑CCATG‑CGGAGGGGATTGTGGCCTGTGCCGTTGGTGGCTGTGATATAGAAGCCGAATGCGATTGAA‑ATGAAAACACGGGCGG‑TAACCGCC‑AGATAGAAAGTTTTAA‑GCGGATGTTTCGTTGCTTTATAGC‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcgac < 1:477529/233‑1 (MQ=255) acatgTTTTGCCCATGCGAAAGGGTTGTGT‑CCTTGGGACAGTGTTTGCTGAGATAAAGAAGAAAATTGGGATGAAA‑ATCAAAACCCCGGGGT‑TAATCCCA‑AGATAGAAACTTTTAA‑GGGGTTGTTTCGTTGCTTTATAGA‑CCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGcgac < 2:1268126/235‑1 (MQ=255) gCCAAAGGGCATTGT‑GCCTGTGCGAGTGGTTGCTGTGAAATAGAAGACAAATGCGATTGAG‑ATGAAACCCCGGGCGG‑TACTCGCC‑AGATAGAATGTCTAAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAg < 1:351088/239‑1 (MQ=255) aTTGG‑GCCGGCGCAAGGGGTTTCTGTGATAAAGAAGGCGAAGGGGATTGAA‑ATGAAAACACGGGGGT‑TAATCGCA‑AGATAGAAAGTCTTAG‑GGGGATGTTTCGTTGTTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACa < 1:334579/226‑1 (MQ=255) tgggcctggaccAGTGGTTGTTGTAATATAGAAGCAGAAGGCGATTGAA‑ATGAAACCCCCGGCGG‑TAACCGCA‑AGAAAGAAAGTCTTAA‑GGGGTTGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATga < 1:776548/236‑1 (MQ=255) tgtggctggtggttgtggttATAAAGAAGACGAATGAGATAGAA‑ATAAAAGCCGCGGAGG‑TAAAGGCG‑AAGAAAAAAGTCTAAA‑GCGGTTGTTTTGTGGTTTTAACAA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGGCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGaaa < 2:548219/230‑1 (MQ=255) aaggggTTGCTTGAATATAAAAGACGAATGCGATTGAG‑ATAAAAACCCCGGGGG‑TAATCGCA‑AGATAGAAAGTCTTAA‑GCGGTTTTTTTGTTCCTTTA‑AGACCACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGatat < 1:701739/235‑1 (MQ=255) ggTTGCTGTAAAATAGAAGAAGAATGGGTTTGAG‑AT‑AAAACCCCGGGGGTTAACCCCC‑AGATAGAAAGTTTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGAt < 1:542082/239‑1 (MQ=255) tGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAGTCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGCAGTAAAAGATCAAAAAGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCat > 1:844605/1‑239 (MQ=255) agaaagcagAATGCGAGTGAG‑ATAAACACCCGGGGGG‑TAATCGCA‑AGATAGAAAGTCTTAA‑GGGGTTGTTGCGTGGTTTTATAGA‑CCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTg < 1:195635/231‑1 (MQ=255) gaCGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAATCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑AACCCGCCTCTTCGGCCACTTTGGCCATTTCAGCAGGAAGTAAAAGATCAAAAGGGGTGTCAGCTTTTACACTAACTCTCTCTTTTTTAATTCGGCGGCGGGATACTAACAAAACATTTAAAATGAGAAAATGATATAGAACATAAATCCCCTGGCTta > 2:1372602/1‑239 (MQ=255) aCGAAGGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAGTCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGata < 1:388841/215‑1 (MQ=255) aTTGAG‑ATAAAACCCCGGGGGG‑AAACCGCC‑AGAAAGAAA‑TGTTAAGGGGGTTGTTTCGTGGTTTTAAAGC‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGt < 1:1014338/238‑1 (MQ=255) aaaaCCCCGGGGG‑TAAACCCCAAAATAAAAATTCTTAA‑GCGGTTGTTTGGTTGTTTTAAAGA‑CCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCAt < 1:1372602/239‑1 (MQ=255) aaCACCGGCGG‑TAATCGCC‑AGATAGAAAGTCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACCTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGGTGTCAGCTTTCACACTAAACCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCCTTATAGATTAGAAACTGATATAGATCatat > 1:1138186/1‑205 (MQ=255) cGCA‑AGATAGAAAGTCTTAA‑GGGGTGTTTTCTTTTCTTTATAGC‑CCCCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACg < 1:770150/239‑1 (MQ=255) tataGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCata > 1:246425/1‑151 (MQ=255) acCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctct < 1:409961/80‑1 (MQ=255) acCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAActctct > 2:409961/1‑80 (MQ=255) acCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCa < 1:4056/175‑1 (MQ=255) acCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCa > 2:4056/1‑175 (MQ=255) aGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATa > 1:942451/1‑155 (MQ=255) aGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATa < 2:942451/155‑1 (MQ=255) tAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTa > 1:14448/1‑145 (MQ=255) tAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCAAATAAAAATAAATTTTAAAAATTAACAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAAc < 1:394491/239‑1 (MQ=255) tAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTGATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTa < 2:14448/145‑1 (MQ=255) | TCAGCCCCAGAGAGAAGCAAATGCCGCCAACCAGTTTTG‑CCATGCCGAAGGGCATTGT‑GCCTGTGCCAGTGGTTGCTGTGATATAGAAGACGAATGCGATTGAG‑ATGAAAACACCGGCGG‑TAATCGCC‑AGATAGAAAGTCTTAA‑GCGGATGTTTCGTTGCTTTATAGA‑CACCCGCCTCTTCGGCCACTTTGGCCATTGCAGCAGGAAGTAAAAGATCAAAAGGGTTGTCAGCTTTCACACTAACTCTCTCTTTATTAAGTCGGCGACGAGATACTAACAAAGCATTATAGATGAGAAATTGATATAGATCATATCTCGCCTGGCTTATAGGCCCGTAACTCGCATGGTTTTTATGCAAATACGGAGTAAATATTTGATTATCCAAATAAAAATAAATTTTAAAAATTAACAAATGAGTTGAATTTTTTCCGCATCCTCCGCTAAAAC > NC_000913/954229‑954675 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |