| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,551,917 | A→C | 18.3% | V186G (GTG→GGG) | malP ← | maltodextrin phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,551,917 | 0 | A | C | 18.3% | 106.9 / 2.1 | 59 | V186G (GTG→GGG) | malP | maltodextrin phosphorylase |
| Reads supporting (aligned to +/- strand): ref base A (35/10); new base C (4/8); total (39/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.76e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
GTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTACCCAGCGCCGGG > NC_000913/3551694‑3552150 | gTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGCCAACGGGGGGATCCCACGCTTGACCGGGAATGGTAAACTCCGGCTCCCAGGGTCCGCCTTTCGTACCTTTACCGCCAATc > 1:382985/1‑238 (MQ=255)gTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGCCAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCCCCCGGACTCCGTCTTTCTTCACTTTACCCCCAATc > 2:774321/1‑238 (MQ=255)gTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACAGTAGCCGACAACGGGGGGATACCACGCTTGGCCGGTAATGGTAAACTCCGCTTCCCAACGGCCGCCTTTTGCACCTTTACCGCCatac > 1:1250998/1‑235 (MQ=255) tCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGCCCGTCTTTCGTCACTTTACCGCCAATc > 1:842872/1‑237 (MQ=255) tGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCACCGTCCGTCTTTCGTCACTTTACCGCCATTCCCTAcc > 1:1190659/1‑238 (MQ=255) gATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCAAAGACGCAGCGGCTGCG‑CAACGCCATTACGATAGCCGACAACGGGTAGATCCCACGCTTGACCGGCAATGGTAAACTCCGGCTCCCAGCGTCCGCCTTTCGTCACTTTACTCCCTATCCCTACCGGc > 1:1141934/1‑239 (MQ=255) agaACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTCCCGCCAATCCCTACCTGCACAt > 1:316620/1‑238 (MQ=255) agaACTTTGGTCAGATTATCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGAAAGCCGACAACGGGCAACTCCCACGCTTGACCGCTAATGGGAAACTCCGGCCCCCAGCGACCGGCTTTCGACACTTTCCACACAACCCCTACCCGcccacc > 2:1303238/1‑237 (MQ=255) tttGGTGAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCCCGCCATTACAATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTATTGGAGAACGCCGGCTCCCAGCGGCCGTCTTTCGGCACTTTACCGCCAACCCCTACCTGcacacacacgg > 2:420057/1‑232 (MQ=255) tttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTCCCGCCAATCCCTACCTGCACCTCCAgcg > 1:1031491/1‑237 (MQ=255) tttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTCCACCTCCAGt > 1:243781/1‑238 (MQ=255) tttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAAACCCGCCTCCCAGCGCCCGTCTTTCGGCCCTTTACCCCCAAAacctacctcccaaccaaag > 2:132968/1‑227 (MQ=255) tttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGGAATGGGAAACTCCGGCTCCCACCGTCCGCCTTTCTCCCCTTTACCCCCAAACCCTACCTGCACACCCAgg > 2:914374/1‑237 (MQ=255) ttttCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTtgtg > 1:504380/1‑239 (MQ=255) tgtGCCGTGTTGTCCGGCACGAAAAAACCCCCCGTGTTAAAATTGGGTCATACCAAGCGGAGGCGGGTGC‑TCCCCGGCCCACACCCGGAGGGGCTGCG‑CCACGCCATTACGATAGCCGACAGCGGGAAGTTCCCACGTTTGACCGTTAATGGTAAACCCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACg < 2:946063/237‑1 (MQ=255) ctgTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCT‑‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGCCACTTTACCGCCAATCCCTACCTGCCCATCCAGGGCTTCGTTGTGGCGGAAACACGGGGAGtt > 1:254809/1‑236 (MQ=255) ttCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACCACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTCCACATCCAGGGCTTCGTTGTGTCGGAACCACgggagcgtaacg > 2:84545/1‑229 (MQ=255) cACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCCCATCCAGTGCTTCGTTTTGGCGGAACCACCGGTAGTTACTGCGATGc > 1:87422/1‑239 (MQ=255) cgtcgtTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCgcgcct > 1:339001/1‑234 (MQ=255) cgtTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTa > 1:878642/1‑212 (MQ=255) gtTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGGGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCa > 1:366131/1‑238 (MQ=255) cGGATGCGCGTGCGTCGCCCG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACaaaaa > 1:599125/1‑238 (MQ=255) gccccTG‑CCACAGACGAAGCGGGTGCG‑CATCCCCATTACGAAAGCCGACAAGGGGAAACTCCCACGCTTGCCCGTTAATGGTAACCTCCGGCTCCCGGCTTCCGTCTTTCGTCGCTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACaa < 1:84545/235‑1 (MQ=255) accgccgcgggggCTGGC‑CCACGCCATTCCGATAGCCGACAACGGGGAGACCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGa < 1:914374/228‑1 (MQ=255) aaccgcgaGCGGCCGCGCCCCCGCCATTACAATAGCCGAAACGGGGGAGACCCCCCTGTTGACCGGGAAGGGTAAACCCCGGCTCACAGCTCCCGTTTTTCGTCCCTTCACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGa < 2:68258/232‑1 (MQ=255) gcgccgcgcgcg‑cCCCGCCTTTCCGATACCCGACACGGGGGATCTCCCCCGCTTTACCGGTAATGGTAAACCCCGCCCCCCAGCGTCTGTCTTCCGTCATTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTc < 2:339001/230‑1 (MQ=255) gaGCGGCTGCC‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTGCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCa < 1:804773/238‑1 (MQ=255) aGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAg > 1:68258/1‑239 (MQ=255) aGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCACGCGCTTCAACCCGTTTGCACTACAAAAAAAACCGGGGGAACAAAACATATTGaaaatt > 2:1046998/1‑231 (MQ=255) cg‑ccacgccaTTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGACCCCCGGGTAATTACTGCGATGCCAGTCATCCGGGGCTTCAACCTTTTTGCCATCGACAAAAGACTCGCGGAACAAACCCTAATTAAAGTTCAAAcccgaa > 2:993866/1‑234 (MQ=255) ccccccccaTTCCGAGAGCCGAAAACGGGGACTTCCCCGGCTTGCCCGTTAATGGAAAACTCCGGCCCCCGGGGCCCTTCTTCCGTCCCTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTGCTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc < 1:1106233/232‑1 (MQ=255) gccaTTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCAt < 1:1057032/185‑1 (MQ=255) gccaTTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCAt > 2:1057032/1‑185 (MQ=255) gtACGATAGCCGACACGGGGGAAACCCCCCGCTTGCCCGGTAATGGTAAACTCCGCCTCCCAGCCTCCTTTTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGa < 1:774321/238‑1 (MQ=255) cagttgCCAACACCGGGGGGTCCCCACGGTTGTCCAGTAATGGTAACCCCCGTCCCCCGGCGTCCGTCTTCCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTTATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGATTg < 2:87422/234‑1 (MQ=255) tAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATc < 1:181825/101‑1 (MQ=255) tAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATc > 2:181825/1‑101 (MQ=255) gCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCCCAGACTGACCGa > 1:537482/1‑239 (MQ=255) gCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCAAATTGTTAATTCAAACCGTAACCCGTCGCAGaccgaccg > 1:841655/1‑238 (MQ=255) gaagcGGGGAATTCCCTCCCTTGAGCGGTAATGGTAACCCCCGGCCCCCAGCGTCCGTTTTTCGTCACTTTACCGCCAATCCCTACCTGCTCATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGt < 1:532278/235‑1 (MQ=255) ggAGATCCCCCGTTTCCCCGGTAAGGTTAAACCCCGCCCCCCCGTCTCCGTTTTCCGTCCTTTCACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCAt < 2:949179/238‑1 (MQ=255) ggAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTTATAGTTCAGACCGTAACCCCTCGCAAACTGACCGCCAGTTTCCAtt > 1:911916/1‑239 (MQ=255) aCGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCAAATTGATAGTTCAGACCGTAACCCGCCGCAGACGACCCGCCAATTGCCCtttggacgcgg > 1:361331/1‑230 (MQ=255) cGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCAAATTGATAGTTCAGAACGGAACCCGTCGCAGACTGAACGACAGGTGCCATTGAGTCGAGGa > 1:554220/1‑239 (MQ=255) cTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGTCGGAACAAACCATATTGATAGTTCATACCGTCACCCGCCGCCAACTGACCGCCAATTGCCCTTTGGTCCAGGAAg > 1:488807/1‑239 (MQ=255) gACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCCCTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGa < 1:1280008/113‑1 (MQ=255) gACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGa > 2:1280008/1‑113 (MQ=255) gACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCCTTGAGTCGAGGAAGCa > 1:66393/1‑238 (MQ=255) tGGTAAACCCCGGCTCCCGGCTCACGTTTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGa < 1:757526/239‑1 (MQ=255) gtaaccccgggCTCCCGGTGTCCGTCTTACGTCCCTGTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACg < 1:1303238/230‑1 (MQ=255) cgccTCCCTGCTCCCGTTTTTCGTGTCTTTCCCCCCAACCCCTACCCGCTCATCCAGGGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGac < 2:504380/236‑1 (MQ=255) cGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTAcc > 1:249857/1‑46 (MQ=255) cGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAAACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACGGACCGACCAATGCCATTTAGTCCAGGAAGCACGGCGCCAGAACACCCAGac > 1:339051/1‑239 (MQ=255) cGGCCCCCAGGCCCCGTCTTTCCTCCCTTGTCCGCCAATCCCTTCCCGCCCATCCCGTGCTTCGTTGTTGCCGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGac < 2:366131/239‑1 (MQ=255) cGGATCCCAGGGTCCGTCTTCCGCCCTTTTACCGCCAATCCCTGCCTGCACAGCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGac < 1:508475/239‑1 (MQ=255) ggCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTTACCGACAGTTGCCATTGAGTCACGGAAGCAAGCCGCCAGACGTCCCAGac > 1:1078440/1‑238 (MQ=255) tcTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCCTATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCCAACGTCCCAAACCACCGTTACCCAgcg > 1:637231/1‑238 (MQ=255) tttccGTCCCTTTACCGCCAATCCCTGCCGGTACAACCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTACCCAgcgc < 1:1275855/234‑1 (MQ=255) tCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGCCCGACAGTTGCCATTTAGTCGAGGAAGAACGCCGCCAGACGTCCCACACCACCGTTACCCCGCGCCggg > 1:1360183/1‑239 (MQ=255) | GTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTG‑CCACAGACGCAGCGGCTGCG‑CCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCGGCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTACCCAGCGCCGGG > NC_000913/3551694‑3552150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |