| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,103,607 | T→C | 15.4% | S457G (AGT→GGT) | cpxA ← | sensory histidine kinase in two‑component regulatory system with CpxR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,103,607 | 0 | T | C | 15.4% | 234.5 / 5.0 | 101 | S457G (AGT→GGT) | cpxA | sensory histidine kinase in two‑component regulatory system with CpxR |
| Reads supporting (aligned to +/- strand): ref base T (49/31); new base C (2/17); total (51/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TGATGACGATCAATATCACCGTTTACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAC > NC_000913/4103370‑4103840 | tggggacgtataaTATCCCCGTTTACTCTCCGCGG‑CAGGGTTAACGAAAAGCTGGGCGCGGACGAGGC‑AAAGGCGGCGACGGAGCGGCAAGGTCGAAGATTTT‑TCCCGCCGGGTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGCCGCTATCAGCGTCGCACC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTc < 2:525524/228‑1 (MQ=255) tgtgaaaaaaaaTCTCCCCTTTTTCTCCCCGCTG‑GGGGGTTATCAAAAAGCTGGACGGGGACGATGA‑AAAAGCGCCGATGGGGCGGAAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc < 2:1230884/229‑1 (MQ=255) aTCAATATCACCGTTTACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGCCGCCTC‑AGGCACCCTGTCCAAATTCC‑CATGCCGGCGGAACGGCCCTATCCTGCCGCCAAATCCAAAGTTAAAACCCCCTtaaa > 2:30220/1‑237 (MQ=255) tcaagaaccccGTTTACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTtata < 1:583318/229‑1 (MQ=255) ttcccccttttCTCTCCCGTGCCCGGTTTTTCGAAATGTTGGAC‑CGGACGGAGCAAAAAGCGCCGATTGGGCGGCAAGAGCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCg < 2:388266/232‑1 (MQ=255) ccccGGTTGCTCTCCGGTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGAGCGAAGATTTT‑TGCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATTCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCa < 1:70575/237‑1 (MQ=255) tttACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑AGCCGTAAACGCCTTATCCTGCCCGCAAATGCGAAGGTTAACTCCCCTAATACACAGGCAACCaa > 2:1127947/1‑239 (MQ=255) tttACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATC‑CGGCGTAAAACCCTGACCCTGCCTGCAAATGCAGAGTTGAACTCCCCTTAAAAAGCGGCAAACaa > 2:903687/1‑239 (MQ=255) gttACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCCAATGCCGGATG‑CGGCGTAAACCCCTTCTCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCaa > 2:1348763/2‑239 (MQ=255) tACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGCCTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGGTTAGGCCTGATAAGACGCTATCAGCGTCGCACC‑AGGCATCCTGCTCAAATGCCGGATC‑GGGCCGTAACGCCTTTTCCTTCCTGCAAATGCAAAGTTTACCTCCACTTAAACAGGCGCCACCaac > 2:789946/1‑237 (MQ=255) tACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGCAGTTTAACTCCGCTTATACAACGGCAAACAAAt > 2:697035/1‑239 (MQ=255) tACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAACGGCACCCaaa > 1:1075694/1‑238 (MQ=255) tACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATCCCGGAAG‑CGGCGTAAAGCCCTATTCCTCCCTCCAAATCCAAAGTTTAACTCCGCTAAAAACACGGCAACCaaaa > 2:619313/1‑238 (MQ=255) tctcCGCGG‑CCGGGTTAAGGAAAAGCTGGCCGCGGACGATGC‑AAAAGCGCCCACTTACGGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:1264438/239‑1 (MQ=39) ctgccGCTG‑CCGGGTTATGGAAAAGCGGGGCGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGACGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:146958/236‑1 (MQ=255) cccccccTG‑CCGGTTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAc < 1:450482/233‑1 (MQ=255) tcCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCAcc > 1:283878/1‑238 (MQ=255) ccGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTTTAAACCGGCAACCAAATCACCa > 1:1256584/1‑238 (MQ=255) ccGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTCCAAATGCGAAGTTTAACTCCGCTTATACACCGGCACCCaaaaaacaaa > 2:254510/1‑232 (MQ=255) gCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGCCTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGTTTGTGGGGAAAATAACCCCAGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAACCGCCTTATCCTCCCGCCAAATGCCAAGTTTAACTCCCCTTATACAGCGGCAACCAAAACACCAgac > 2:275082/1‑237 (MQ=255) gCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCATCCCTGCAAATGCGAAGTTTAACCCCGCTTATAAACCGGCAACAAAACaaccaacc > 2:89384/1‑239 (MQ=255) gcggcggggTTACAGAAAAGGTGGACGCGGAGGAGCC‑AAAGGGGCGGACTGAGGGGCAAGATCGAAGTTTTT‑CCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGcc < 1:1151817/233‑1 (MQ=38) gACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGtcttcgg > 1:1232120/1‑235 (MQ=255) aCGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCCAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAATTAACCAGCCGTAAACAGCCCCACGGGCTGTCTTCTCCCt > 1:945518/1‑239 (MQ=255) aCGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGCAAACCGCCCACCGGGCTGCCTTCTccc > 1:628277/1‑238 (MQ=255) aCGATGA‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑CCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGcc < 1:784849/238‑1 (MQ=255) cGAGGC‑AAAAGCGCCGACTGGGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGCCGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCt < 1:601981/238‑1 (MQ=255) ggaaaaaGCGCCGACTGGGGGGAAAGTTC‑AAGATTTTGTCCCGCCGGTGGTGGGAAAAATACCCCCCTGAGTGGAGGCCTGATAAGACGCTATCAGCGCCGCATC‑AGGCATCCGGCTCAACTGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCa < 2:628277/235‑1 (MQ=255) gcCGACTGGGGGGAAAGAGCGAAGATTTT‑TCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTACCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCa < 1:1318411/237‑1 (MQ=255) ccGACTGAGCGGCAAGATCGAAGCTTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGGTG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCCCTTATACAGCGGCACCCAAATCACCACCCGTAAACCGCCAACCGGGCCGCCTTCTGCCTTCACccacccacc > 2:59977/1‑237 (MQ=255) ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGACGTTTAACTCCGCTTATACAGCGGCAACCCAATCACAAGCCGGAAACACCCCAACGGGCTGCCTTCTGCCTTCACCCAGCCACGa > 2:270851/1‑239 (MQ=39) ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTaaa > 1:847369/1‑200 (MQ=255) ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCCCGa > 1:1102773/1‑239 (MQ=255) ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGGAAACCGCCCAGCGCGCTGTCTTCTGCCTTCCCCCAGCCACg > 1:648428/1‑238 (MQ=255) ccGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAACCACCACCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCaccacc > 1:437727/1‑232 (MQ=255) cGACTGGGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGGGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGa < 1:270851/238‑1 (MQ=255) gACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGTGGAAAATAACCCCCGGCGTGTAGACCTGATAAGACGCTATCAGCGTCGCATC‑AGACATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGACTTAACCTGCCTGCAAATGCGAAGTTTAACTCCGCTTTTACTACGCCAACCAAATAACCAACCCTAACCCGCCCACCGGGCTGTCTTCTTCCTTACCCCAGcgccgag > 2:1077866/1‑232 (MQ=255) tCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACCGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCGTTCTTCTGCCTTCACCCACCCCCCATTCCCCTCAATGGC‑ggg > 2:1062398/1‑238 (MQ=255) tttt‑tCCCCCGGGTGGTGGGGAAAATAACCCCCGTGGTGTAGGCCTGATAAGCCGCTGACAGCGTCGCATC‑ATGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTcaaca < 2:648428/239‑1 (MQ=255) tt‑tCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTcaacaa > 1:280599/1‑238 (MQ=255) t‑tCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACAGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGCATGGC‑GGTTTCACCAAt > 1:513503/1‑238 (MQ=255) ccgcggGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGcc < 1:1141543/239‑1 (MQ=255) ccgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGAAAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGcc < 1:89384/239‑1 (MQ=255) ccgccgGTTGGGGGGAAAATACCCCCCGGGGGGGTGGCCCGATAAGCCCCTTCCCGGGT‑GCAACTAGGCATCCTGGTCAAATGCGGGATG‑GGGCGTAAACGCCTTATCCTGCCTGAAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGcc < 2:1075694/239‑1 (MQ=255) ggTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGccc < 1:1226749/239‑1 (MQ=255) aaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGCGGGTTTAAACACCTCCCACCCCCAAAccgtcc > 2:817288/1‑234 (MQ=39) acccccgGGGGTGGATGCCTGATAAGCCGCTGTCGGCCGGTCATC‑AGGCCTCCTGGTCAAGTGGCGTACG‑GGGGTAAAACCCCTTATCCTCCTTGGCAGTGAGAAGTTTAACCCCGCTGATACCGCGGCAACCAAACCACCAGCCGTAATCCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGcc < 2:933052/237‑1 (MQ=255) accccccGGTGTGGAGGCCTAAAAAGAGCCTTCCAGGGTCGCAAC‑GGGCCTCCTGTCAAAAGGCCGGATG‑CGGCGTAAACGCCTTACCCTGCCTGCAAATGCGAAGTTTAACCCCGTTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGcc < 2:312770/237‑1 (MQ=255) cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAACTGCCAGCCCCCAACCTGTACCCCCAg > 1:93604/1‑239 (MQ=255) cccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGCTG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCACCGGGCTGCCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCACCCCCAAACCTGTCCCCCCAgga > 1:655224/1‑237 (MQ=255) ccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCCGTACCGcccaat > 1:312770/1‑234 (MQ=255) ccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGGTTCAAAAAACACCCCCCCCCAACCCGTACCCCCACA‑tt > 2:1037604/1‑239 (MQ=39) aGTGTAGGCCTGATAAGACGCTACCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGccc < 1:1256249/215‑1 (MQ=255) gtAGGCCTGATCAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATCCACCGGCAACCAAATCACCAGCCGTAAACCGCCCAACGGGCGTCCTTCTTCCTTCACCCTGCCACGATGCTCCTGAATGGC‑GGTGTCACCAACAGCCCCCCCCCAACACATACCCCCACA‑TA‑CACgct > 2:112963/1‑236 (MQ=255) tAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AAGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCCAAAATCGCCAGCCCCCAAACTGTTCCGCCAAA‑tttccgaac > 1:723229/1‑231 (MQ=255) ccTGATAAGACGCTTCTCGCGTCCCATC‑CGGCATCCTGCTCAAATGCCGGATG‑CGGCGAAAACGCCTTCTCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATCCAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTg < 2:280599/239‑1 (MQ=255) cTGAAAAGACGCTATCAGGGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑GGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGc < 1:1015451/239‑1 (MQ=255) aTAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCCAACCCTTACCCCCAGATTT‑CAC‑ATCGCCTGCTTc > 1:752506/1‑239 (MQ=255) cGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCACCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCCCGTGCTTCACC‑gtgccgagagaa > 1:874700/1‑228 (MQ=255) tCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGAGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAAAAATCGCCAGCCCCAAACCTGTACCGCCCGA‑TT‑CACCATCCTGTGCTTCTCC‑CGTACG‑ATAGAacg > 1:778251/1‑239 (MQ=255) aTC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCCGA‑TT‑CACGATACCGGGCTTCATC‑GGTACG‑ATAGAacggacg > 1:176334/1‑239 (MQ=255) gggCATCCTGCTCAAAGGCCGGATG‑CGGCGTAACCGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGaa < 1:697035/238‑1 (MQ=255) ctCCTGCTCAAATGCCGGATG‑CGGCCTAAACCCCTTACCCTGCCTGCAAATGCGAAGTTTAACTCCCCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAAt < 1:873767/237‑1 (MQ=255) ccTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCACGCCCCAAACCTGTACCCCCAGA‑TT‑CACGATCGCGCGCTTCATC‑GGTACC‑CTAGAACGGACGGaaaa > 1:928329/1‑235 (MQ=255) cTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTTAACAAACGCCAGCCCCAAACCCGTACCGCCAGA‑TT‑TACCATCCCGGGCTTCCTC‑GGTACG‑ATAGAACGGACGGgaaaaccgt > 1:376631/1‑234 (MQ=255) cTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCTCCCGCCCCAAAACTGTACCGCCCGA‑TT‑CACCAACGCGTGCTTCATC‑GGGACG‑AAAAAACGGGAGGAAAAACttt > 2:16413/1‑237 (MQ=255) taaaGGCCGGATG‑CGGCGTAAACGCCTTACCCTGCCGGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTcgcg < 1:1037604/238‑1 (MQ=255) cAAAGGCCGGATG‑GGGGGTAAACGCCTTACCCGGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTcgcg < 1:16413/239‑1 (MQ=255) aaaaTGCCGGATG‑CGGCGAAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGGTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTcgcg < 1:1040794/238‑1 (MQ=255) aTGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCCCGGGCTTCATC‑GGTACC‑GAAAAACGGACGGAAAAACTGTTCCCGa > 1:843703/1‑237 (MQ=255) aTGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGGTTCCACAATCGCCCGCCCCCAACCTGTCCCCCCCGA‑TT‑CGCGCACGCCCGCTTCAAC‑GGTACG‑AAAAAACCGGCGGAAAAACTTTTcgcgcc > 2:56725/1‑236 (MQ=255) ggggtG‑CGGCCTAAACCCCTTATCCTGCCACCAAAAGCGAAGTTTAACCCCGCTTTAACAGCGGCACCCAAACCACCAGCCGTAAACCGGCCAGCGGGCTTTCTTCGGCCTTCCCCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAAGCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑cc < 2:928329/235‑1 (MQ=255) ggATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACCATCGCCCGCCCCCAACCCCTACCCCCCGA‑TT‑CACGATCGCGGGCTCCATC‑GGTACG‑ATAAAAAGGACGGAAAAACTTTTTGCGATCTT‑CCg > 2:566083/1‑239 (MQ=255) ggATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATTGCCAGCCCCCAACCTGTACCGCCAAC‑TT‑CCCGATCGCGTGCTTCCTC‑CGTACG‑CGAGAAACGCCCGAAAATCCTTTTGCAGTCTT‑ccc > 1:584753/1‑238 (MQ=255) cgggtggcgcttAAACCCCTTTACCTGCCTGAAAATGCGAATTTTAACTCCGCTTATACAGCGGCAACCAAACCACCAGCCGTAAACCGCCCAGCGGGCTGTCGTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑cc < 1:406985/228‑1 (MQ=255) g‑cggcgTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCt < 1:566083/239‑1 (MQ=255) gggcgTAAACGCCTTATCCCTCCGGCAAATGCGAAGTTTAACCCCCCTTATACCGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCt < 1:88933/237‑1 (MQ=255) cggcgAAAAGCCCTTAACCTGCCTGAAAATGCAAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCt < 1:817288/238‑1 (MQ=255) ggcgTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAAAAATTCCCCGGCCCCAACCTGTACCCCCAAA‑TTCCACCA‑CGCGGCCTTCCAC‑GGGATG‑ATAAAAAGACCCGAAAAACTTTTCGCGACCGT‑CCggggcaa > 2:496919/1‑235 (MQ=255) taacccgcTTCTCCTGCCGGCAAAGGCGAGTTTTCACCCCGCTTGAACAGCGGCACCCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGcc < 2:808388/232‑1 (MQ=255) ttttccctccctgCAAATGCGAAGTTTAACGCCGCTTATACAGCGGCAACCAAACCCCCAGCCGTAACCCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCa < 2:376631/234‑1 (MQ=255) cTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGACTGGC‑GGTTTTCACAATCGCCAGCCCCAAACCCGTACCCCCCAG‑TT‑CCCGGTCGCGGCGTTTACC‑GGGCCGCATA‑AACGGACGGGAAACCCTTTTGCCATTCT‑CCGGGCTAACCCCCGAAccc > 2:1131562/1‑238 (MQ=255) ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCCACAAACGCCCCCCCCACACCCTTACCGCCCGA‑TT‑CCCGCGTGCGTTCTTCATC‑GGTACG‑ATAGAACCGCCGGAAAATATGTTCGCCATCTT‑CCCGGCTAAAGcccagacac > 2:1259743/1‑231 (MQ=255) ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGGAAATCTGTTTGCGATCTT‑CCGGGCTAACGCCAGGACCa > 1:873193/1‑238 (MQ=255) ttATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGGACG‑GTAGAACCGACGGAAAAACTGTTCCCGAGCTT‑TCGGGCTAAAGCCCAGACCa > 1:766169/1‑238 (MQ=255) tccttgcccgcAAATGCGAAGTTTACCCCCCTTTTTACCGGGGCACCCAAACCACCAGCCGTAAACCCCCCAGGGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCAtcg < 2:1097194/235‑1 (MQ=255) tgctgaAAATGCGAAGTTTAACCCCGCTTATTCAGCGGCAACCAAACCCCCGGCCGTAAGCCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:1252750/237‑1 (MQ=255) gcctgtAAATGCGAATTTTAACTCCGCTTATCCAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:1348763/239‑1 (MQ=255) gcctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCGCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:275082/239‑1 (MQ=255) gcctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTATCAACAAACGCCCGCCCACCACCCTTACCGCCAGA‑TT‑TAACATCGGCTGCTTCCTCGGGCAGC‑AAAGAA‑GGCAGGAAAATATATTCGCGACCTTCCCGGGCAAACGCCGGGA‑CAtcgtcggc > 2:887172/1‑237 (MQ=255) gcctgcAAATGCGAAGTTTAACCCCGCTTAATCAGCGGCCACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:228762/239‑1 (MQ=255) gcctgcAAATCGGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 1:59977/239‑1 (MQ=255) gcctcaaattGCGAATTTTAACACCGCTTTTACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGTGCTGTCTTCTTCCTTCCCCCAGCCACGTTGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCGGTACCGCCAGA‑TT‑CACGATCGCGTGCATCAGC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCgtcgtc < 2:466446/230‑1 (MQ=255) ctgcAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACCAACTCCACCCCCACACCTGTACCCCCACA‑TT‑CCCCAACGCGCGCTTCATC‑GGTCAG‑ATAAAACCCGCGGCAAAACCGTTACCGCACTT‑CCGGGCAAACCCCCGGCCCACCACCGTcc > 2:652103/1‑238 (MQ=255) ctgaAAAGGCGAATTTTAACCCCGCTTATACAGCGGCAACCAAACCCCCAGGCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCCCGGTGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCa < 2:331820/239‑1 (MQ=255) cggcAAATGCAAAGTTTAACCCCGCTTATGCAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCa < 1:619313/237‑1 (MQ=255) acgcaaattttAACCCCTCTTATACCGCGTCCACCAAATCCCCAGCCTGAAACCGCCCAGCGGGCTGTCTTCTGCCTTCCCCCAGCCCCGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTaa < 2:1238989/231‑1 (MQ=255) aTGCGAAGTTTAACCCCGCTTATACAGCGGCAACCAAATCCCCAGCCGTAAACCGCCCAGCGGGCTTTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTaa < 1:588753/239‑1 (MQ=255) ttAACTCCGGTTATACAGCGGCAACCAACTCACCAGCCGGAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAc < 1:156020/239‑1 (MQ=255) ttAACCCCGCTTAAAGAGCGGCAACCAAACCCCCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATa < 1:254510/238‑1 (MQ=255) | TGATGACGATCAATATCACCGTTTACTCTCCGCTG‑CCGGGTTATCGAAAAGCTGGACGCGGACGATGC‑AAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTT‑TCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATC‑AGGCATCCTGCTCAAATGCCGGATG‑CGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTAAACCGCCCAGCGGGCTGTCTTCTGCCTTCACCCAGCCACGATGCTGCTGAATGGC‑GGTTTCAACAATCGCCAGCCCCAAACCTGTACCGCCAGA‑TT‑CACGATCGCGTGCTTCATC‑GGTACG‑ATAGAACGGACGGAAAATCTGTTCGCGATCTT‑CCGGGCTAACGCCAGGACCATCGTCGTCCACCGTAATGGTGATAC > NC_000913/4103370‑4103840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |