| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,542,117 | A→G | 10.8% | R27R (AGA→AGG) | fimE → | tyrosine recombinase/inversion of on/off regulator of fimA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,542,117 | 0 | A | G | 10.8% | 249.1 / 2.4 | 100 | R27R (AGA→AGG) | fimE | tyrosine recombinase/inversion of on/off regulator of fimA |
| Reads supporting (aligned to +/- strand): ref base A (41/44); new base G (9/3); total (53/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATT > NC_000913/4541884‑4542348 | gATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTTTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta < 1:222248/239‑1 (MQ=255)gATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta < 1:71804/239‑1 (MQ=255) ttttattttTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACGGGGCAAAGGGAGACCGAGA‑ATATTgg > 2:222248/1‑238 (MQ=255) tttttGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGCGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTAAGGCCATGATGCAGGCGGTTTTTTTCGGGGGAACGGGAGCCAAGGA‑TTATTTTCTTAt > 2:994828/1‑239 (MQ=255) tttAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTa < 1:1212625/225‑1 (MQ=255) aaTGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCCACGGGAGCCAGGGA‑TTATTGTCTTATTCTGTTGGCATAACg > 1:36028/1‑238 (MQ=255) ttttaTTGGCTTATTGCCACATCACCCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 2:1303438/235‑1 (MQ=255) tttatttGACTTATAGCCACATCACTCCTTTTTTGTTTATCTTTTTATCTATTGGGATAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 2:528743/234‑1 (MQ=255) tGTAATTGACTTATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 1:994828/239‑1 (MQ=255) tGTAATTGACTGATAGCCAAATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 1:1223536/239‑1 (MQ=255) agtGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGATGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATggg < 1:842421/237‑1 (MQ=255) aTTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTGTACGGGGCAACGGGAGCCAGGAG‑TTATTGTCTTATTCTGTTTGCATATCGGCATggg > 1:1228631/1‑239 (MQ=255) aTTGACTGATAGCCAAATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATggg < 1:382860/239‑1 (MQ=255) ttGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACAGGGGAACGGGAGCCAGCGG‑ATATTTTTTTTTTTTTGTGGCAAATCGGccagggg > 2:1223536/1‑233 (MQ=255) aTAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTAAGGCCATGATGCAGGCGGTTTGTTACCGGGCAACGGGGCGCAGAGA‑ATATTTTCTTTATCTGTTGGCATATCCGCATGGGGTGCGGAt > 1:96858/1‑239 (MQ=255) acttCACTTCGTTTTTGGTTATTTTTTTATCTATTGGGCTAATTTTTACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGa < 2:119989/236‑1 (MQ=255) acaTCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTATTTTTCTTTTGGAGTATTTGCATGGGGTGCGGAGTA‑GTGa > 2:37572/1‑239 (MQ=255) ctcTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTg < 1:37572/237‑1 (MQ=255) cACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGCGCCAGAGG‑TTATTGTCTTTTTCTGTTTGGAATTTGGCCTTGGAATCGTATTA‑GTGCAca > 1:1189984/1‑237 (MQ=255) tCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTGAACtcgtt > 1:206516/1‑235 (MQ=255) tgtgttGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta < 2:361256/183‑1 (MQ=255) tgtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta > 1:361256/1‑183 (MQ=255) tgtgtgGTTATCTTTGTATCTATTGGGCTAATTTTGACCGATTGAGGTTACGTATAGGTATTCATTCAAAT‑ATATCTCAGGTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGAAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTAtt < 1:649135/223‑1 (MQ=255) gtgtgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑GTATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTAAGGGGGAAAGGGAGCCA‑AGAGTTATTGTCTTTTTTTTTTGGCATAACCGCATGGGGTGGGTATTT‑GAGAACTGTTTTAttt > 2:522391/1‑237 (MQ=255) tgGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTTTCTTATTTTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATTTGCa > 1:347256/1‑239 (MQ=255) tgtttacTTTTTTACTATTGGGTTAAATTTTGCCGGTTGGAGTTTCCCAAAGGGTTTCCATCAAAT‑ATATCTCAGTTAGGAATTCTTCTATTTGGAATAAACGGCGGTTTCTTACCGGTAAAGAAGGTCAGGGCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCa < 1:906591/232‑1 (MQ=255) gTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACCGGGGAAAGGGAGCCACGGG‑TTATTTGCTTTTTTTGTTGGCCAATCGGGATGGGGGGGGTATTA‑ATGGAATGCTTTATTTGCAtt > 2:65800/1‑239 (MQ=255) tCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑TTGAACTGCTTGATCTTCATTATCa > 1:1054498/1‑239 (MQ=255) aTCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTTTTGTCTTATTCTGTTGGCATATCGGCa > 1:358805/1‑193 (MQ=255) aTCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCa < 2:358805/193‑1 (MQ=255) ggCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATc < 1:1094895/223‑1 (MQ=255) ttAATTTTGCCCGATTGAGGTTTCCTTTAGGTATTCATTCAAAT‑ATATCCCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAt < 2:36028/237‑1 (MQ=255) tAATTTTGACCGATTGGGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta < 2:1077053/155‑1 (MQ=255) tAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta > 1:1077053/1‑155 (MQ=255) aTTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGTTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGGCACGGGACGCCGAGA‑TTATTGTCTTTTTCTTGTGGCAGAACGGCATTGGAGGCGTATTA‑TTGAACTTCTTGTTTTGCATTATCAAGAACCTTACCCTTAT‑GAAg > 2:941130/1‑239 (MQ=255) gACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGGATGGGATGCGTCTTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGgaga > 1:731353/1‑239 (MQ=255) aTTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGC‑TTATTTTCTTCTTCTGTTGGCATATCGGCCTGGGAGTCGGGTTT‑GGTGACAGCTTGTTTTTCATTTTCAGGACCTTTGCCttaat‑taaaggaaaaaaaa > 2:1167482/1‑228 (MQ=255) tCCTATAGGTATTCATTCACAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCCAAGGGAGCCAGAGG‑TTTTTGTCTTATTTTTTTGGCCTATCGGGACGTGATGAGCGTTT‑GTTGACTTCTTTTACTGCATTGTCAGGACCCTGTCCTTTAT‑GAAGGGAGAAAAAAAAtttccca > 2:1190328/1‑234 (MQ=255) ccTATAGGTATTCATTCAAAT‑ATATCGCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGt < 1:673227/221‑1 (MQ=255) cTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGa < 1:793980/177‑1 (MQ=255) tttaattcaAATAATATC‑CGGTTAGGAGTACTACTATTGTGAGTAAACGGTGTTATCTTAACGGTAAAGAAGGTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAAc < 2:890959/235‑1 (MQ=255) attcattcAAAT‑ATATCTCAGTTAGGAGTACTACTAGTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAAc < 1:97618/239‑1 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGa‑tta < 2:243648/123‑1 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACCGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCCTATCGGCATGGGATGCGGATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGGATAAATATTCGCCGCCTGAGGAACg > 1:62122/1‑239 (MQ=255) ttcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACAGGGCAACGGGAGCCAGAGa‑tta > 1:243648/1‑123 (MQ=255) tcattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCCACGGGAGCCAGCGA‑TTATTTTCTTATTCTGTTAGCATTATGGCATGGGATGCGGATTA‑GGGAAATGGTTGAt > 2:793980/1‑177 (MQ=255) cattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACCGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATTCGCATGGGATGGGTATTA‑GTGAACTGCTTGATCTGCATTATACGGACCTTGACCTTAAT‑GGAGGTAGAATAAATATTCTCCGACTGAAGAACGGa > 1:890959/1‑239 (MQ=255) cattcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCCACGGGAGCCAGCGG‑TTATAGTCTTATTTTGTTGGCATATCGGCATGGGGAACGTCTTA‑GTGAAATCCTTGGTCTCCATTATAGGGACCTTGTCCTTATA‑TAAGGAGGAATAAAAATTCTCCGCCTGAAAAAAggg > 2:1366012/1‑238 (MQ=255) tcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg < 2:135521/154‑1 (MQ=255) tcaAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg > 1:135521/1‑154 (MQ=255) aaaT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCCTATTCTGTTGGCATATCGGCCTGGGATGCGGATTA‑GTGAACTGCCTGGTCCGCATTTTTAGGACCCTGACCTTTAT‑GAGTGTAAAATAAATATTCGCCGCCTGAAGAAAGGAttttt > 2:265015/1‑238 (MQ=255) atCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACCGGGCAACGGGAGCCAGAGA‑TTATTTTCTTATTCTTTTGGCCTATCGGCATGGGATGCGTATTA‑GTGAACTCCTTGATCTGCATTATCCGGACCTTGACCTTAAT‑GAAGGTAGAATAAAAATTCGCCGCCTTAAGAACGGATTTTCTACCGt > 1:1263169/1‑239 (MQ=255) gTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCAATGGATGCGGATTATGTG‑ACTGTTTGATCTGCATTATTAGGAACTTGAACTTAAT‑AGAGGGAGAATAAAAAATTGCCAGCCGAAAAAAGGATTTTTTACCATTccacc > 2:598587/1‑235 (MQ=255) ttAGGAATACTCCTATTGGGAGTAAACGGCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAgg < 1:1359550/190‑1 (MQ=255) aGGGGTTCTACTTTTTTTAGTAAACGGTGTTATCTTACCGGTAAAGAAGTTCAGGCCATGGTGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGtt < 2:206516/239‑1 (MQ=255) actactATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGGCACGGGAGCCCGAGA‑TTATTGTCTTATTCTTTTGGGATATTGGCATCGGGAGCGGATTT‑GTTGCATGCTTGATCTGCATTTTCCGGACCTTTACCTTACT‑GGAGGTAGAATAAATATTCGCCGACTGAAGAAACGGTTTTCTACCGTTTACCCATTACGttt > 2:987066/1‑239 (MQ=255) actactATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGGGCCAGAGA‑TTATTGTCTTATTCTGTTGGCAAATCGGCATGGGGTGCGTATTA‑GTGAACTTCTTTATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTGGAATAAATATTCGCCGACTGGAGAACGGATTTTTTACCGTTCACCCGTTAAGttt > 1:1285517/1‑239 (MQ=255) actactATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTTTGTTTGCATATCGGCATGGGGTGCGGATTA‑GTGAACTGCTTGATCTGCATTTTCCAGACCTTGACCTTAAT‑GAAGGGAGAATAAATATTCCCCCCCTGAAGAAAGGATTTTTTCCCGTTCCCCCCTTTCtttt > 2:828190/1‑239 (MQ=255) tactaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGGAGAATAAATATTCGCCGCCTGAAGAACGGGTTTTTTTCCGTTTAccccgtcagttttg > 1:1147543/1‑228 (MQ=255) tactaTTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCCGCATGGGGTTGGTATTT‑ATGAACTGCTTGATTTGCCTTATTAGGGCCTTGAACTTTAT‑GAAGGCATAATAAATATTCGCCCCATGAAAAACGGCATTTTTACCCTTCTCCCCTTACGTTTtg > 2:73485/1‑239 (MQ=255) gtgAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCCGGGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTAGCCGACTGAAGAACGGGTTTTTTACCGTTCACCCGTTACGGTTTGATGGGCg > 1:787734/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTTTTACTGGGCAACGGGAGCCAGAGA‑TTATTGGCTTATTCTTTTGGCCTATCGGCATGGGTTGCGGATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAAGTAGAATAAAATTTCGCCGCCTTAAGAACGGATTTTTTACCGTTTACCCTTTACGTTTTGATTAGCGTGa > 1:1235648/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAAAATTTGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGCTACGTTTTGATGAGCGTGa > 1:315545/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAAAATTCGCCGCCTGAGAAACGGGTTTTCTACCGTTCACCCGTTAAGTTTtgatgacgcgga > 1:87400/1‑233 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTGAACTGCTTGATCTGCCTTATTAGGGCCTTTGCCTTAAT‑TAAGGGAGAAAAAATATTTTCCGACTGAAAAACGGATTTTCTACCGTTCCTCCGGTACGGTTTGATTAggggta > 1:844908/1‑234 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTTACCCGGTACGTTTTGATTAGccgta > 1:359016/1‑235 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAAAGGGAGCCAAGGA‑TTATTGGCTTATTCTGTTGGTATATGGGGCAGGGATGGGGATTA‑GGGAACTTCTTTGACTGCATTATCAGGACCCTGACCTTAAT‑AAAGGGTGAATAAATATTCCCCGACTGAAGAACGGATTTTTTACGGGTGAACCGTTACGATTTTATGAGCGTGa > 1:946326/1‑239 (MQ=255) aGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGAAAAGGGAACCAGAGA‑TTGTTGTCTTATTTTTTTGGCACATTGGCTCGGGATCCGTAATA‑GGGAACTGCCTGATCTGCCTTATCCGGTGCTTTGCCTTTAA‑GAAGGGAGAAGAAATTTTCAACGGATTAAGAACAGATTTGGTTCCGTTCCCCCGTTTCGTTTTTATTGGCGTGa > 1:60751/1‑239 (MQ=255) tAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGGGCCAGAGA‑TTATTGTCTTATTCTTTTGGCATATCGGCATGGGATGCGTATTA‑GTGGACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTTGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGGGaa > 1:131850/1‑238 (MQ=255) aCGTTGTTTTCTTACAGGTAAAGAAGTTCAGGGCATGATGTCGGCGGTTTGTTGCGGGGCACAGGGAGCCAGGGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCg < 2:1235648/239‑1 (MQ=255) tcgtTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTTGCCGACTGGAGAACGGATTTTTTAACGTTTACCCCTTACGTTTTGATAGGGCTGAAGCCgggg > 1:83511/1‑239 (MQ=255) tagcctACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGAGCTGCATTATCAGGACCTTGACCTTAAG‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACg < 1:987066/234‑1 (MQ=255) tATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGGGA‑GTATTGTCTTATTCTGTTGGCCTATCGGCATGGGATGCGTATTA‑GGGAACTGCTTGGTCTGCATTATCAGGACCTTGACCTTAAA‑GAAGGAGGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTAGCTTTTGATGTGGGTGAAGACGTGGGAc > 1:55767/1‑238 (MQ=255) tttttACCGGTTAAGGAGTTCAGGCCATTATTCAGGCGGTTTTTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTAGTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGc < 2:1285517/236‑1 (MQ=255) tCTTACGGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCt < 1:1167482/239‑1 (MQ=255) tCTTACCGGTAAAGAATTTTAGGCCATGGGGGAGGGTGTTTGTTACGGGGCAACGGGGGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCt < 2:55767/239‑1 (MQ=255) ccGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGGTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGAcc < 1:65800/239‑1 (MQ=255) aaaGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGAt < 2:910778/114‑1 (MQ=255) aaaGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGAt > 1:910778/1‑114 (MQ=255) tttaGGCCATGTTGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGT‑TTATTGTCTTATTCTGTTGTCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCt < 2:60751/236‑1 (MQ=255) ttaGGCCATGATGCGGGCTGTTTGGTCCGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCAAATCGGCATGGGATGCTTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCt < 2:731353/236‑1 (MQ=255) tCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCt < 1:828190/238‑1 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTACGGGGGAACGGGAGCCAGGGA‑TTATTGGCTTATTCTGGTGGGATATTGGGATGGGATTCGTCTTA‑GGGAAATGCTTGATCTGCCCTAGACGGAGCATTGCCTTGATGGAAGGAAGAA‑CAATAATTGCCGCCTGGGAAATGGGATTTCTTCCGTTTACCCCTTACGTTTTTATGGCCGGAAAGACATGGGAAGCGGGAACCAAGAACggaccaa > 2:272796/1‑233 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGGGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg > 2:420156/1‑86 (MQ=255) cAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCg < 1:420156/86‑1 (MQ=255) cAGGCCATGACGCAGGCGGTTTGTTTCGGGGAAAAGGGGGCCAGAGA‑TTATTGTCTTATTCTTGTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTaa < 2:1263169/239‑1 (MQ=255) gCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAAc < 1:21809/229‑1 (MQ=255) cATGAGGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGa < 1:591120/239‑1 (MQ=255) atgatgCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGAACCCAGGAACGTGCTAACTGGaa < 1:598587/239‑1 (MQ=255) atgatgCAGGCGGGTTGGTACGGGGCAACGGGAGGCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTAACAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGaa < 1:265015/239‑1 (MQ=255) gatgCAGGCGGTTTGTTACGGGGCAACGGGATCACGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGGGTATTA‑GTGAACTGCTTGATCTGCATTATCAAGAACTTGACCCTTAT‑GAAGGGAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTAAGATTTGATGACAGTTTACCCGGGGGATGCTGGTCCCCGGAACGTGCTAACTGGaagg > 1:1036248/1‑237 (MQ=255) gctggtgtttttttGCGGGGCAACGGGAGCCAGAGA‑TTATTTTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTCGACCTTAAT‑GAAGGTAGAATAAATAGTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGgcg < 2:96858/231‑1 (MQ=255) gCGGTTTGTTACGGGGCAACGGGAGCCCGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGGATTA‑GGGAAATCCTTGATCTGCATTTTCAGGGCCTTGGACTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCCCCCCGTACGTTTTGTTGAGCGTGAAGCCGTGGTATCATGGACCCCGGAAAGTGGTAATTGGAAAgggggggg > 2:836071/1‑233 (MQ=255) tttttGTTACGGGGCAGTGGGATCCGGGGA‑TTATTTTTTTATTCTGGTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATAGTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGAc < 2:1189984/236‑1 (MQ=255) gTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACt < 1:1249399/239‑1 (MQ=255) agggggCAACGGGAACCAAGTA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATTCGTATTA‑GGGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGAc < 1:723943/237‑1 (MQ=255) ggggCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGc < 1:26094/239‑1 (MQ=255) cAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCTTGGAACGCTGGACCCAGGAACGTGCTAAATGGAAAGGCGCTGACCGGACTGACGCtata > 2:1000445/1‑239 (MQ=255) cGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGGGCTAACTGGAAAGGCGCTGCCCGGACTGACGCTAtattt > 1:1089259/1‑239 (MQ=255) gCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCTTTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAACTATTCGCCGCCTGACGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGTGCGGGAACCCGCGGAACGCGGGACCCAGAAACGTGCTAACCGGAAAGGCGCTGACCGGAATGCCGccaacttcatt > 2:924739/1‑227 (MQ=255) | GATATTTTATTTTTGTATGATATTTAATGTAATTGACTGATAGCCACATCACTCCGTGTGTGGTTATCTTTTTATCTATTGGGCTAATTTTGACCGATTGAGGTTTCCTATAGGTATTCATTCAAAT‑ATATCTCAGTTAGGAGTACTACTATTGTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGA‑TTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTA‑GTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAAT‑GAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATT > NC_000913/4541884‑4542348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |