Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 816,752 | T→A | 11.6% | intergenic (‑105/‑292) | ybhK ← / → moaA | putative CofD superfamily transferase/molybdopterin biosynthesis protein A |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 816,752 | 0 | T | A | 11.6% | 276.3 / 4.5 | 86 | intergenic (‑105/‑292) | ybhK/moaA | putative CofD superfamily transferase/molybdopterin biosynthesis protein A |
Reads supporting (aligned to +/- strand): ref base T (51/24); new base A (2/9); total (53/33) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.38e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAAT > NC_000913/816517‑816976 | ttATCGGTGGTTGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGGCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTaaa < 1:1120287/239‑1 (MQ=255) ttCGGTGGGTGTGAAGATCCCCGTAAAACGCAACCCCAAAGACGAAAG‑GTAGAGAAG‑AACG‑CCCCCCCGCCCGTCCCCTCCCCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAgg < 2:714384/238‑1 (MQ=255) tCGGTGGTGGTGACGATACCCGTTAAACGAACACCCAAAGGCGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCCCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAACCAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGa < 1:646442/239‑1 (MQ=255) gcGGTGGTGGTGACGATCCCCTTTAAACGAAACCCCAAAGAGGAAAGGGAGGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGa < 2:118053/238‑1 (MQ=255) gcGGTGGGGGTAACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGGCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAAATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGa < 1:452799/238‑1 (MQ=255) tggtggtgACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTTCCAATATTGAGGATACAAACTATTTTATTCTACCTCAAAAAGACGaa > 2:1305099/1‑238 (MQ=255) ggtgACGATCCCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCa < 1:264690/238‑1 (MQ=255) gtgACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCAc > 1:118053/1‑238 (MQ=255) aCGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATA‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGCGGATACAAACTATTTTATTTTACCTCAAAAGAAAGAAGAACGcag > 2:716824/1‑237 (MQ=255) cGATACCCGTTAAACGAGAACCCAAAGCCGAAAGGGATGAG‑AG‑AACG‑CGTCCCAGCCCAGGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTa < 1:917270/238‑1 (MQ=255) gATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGTTACAAACCATTTTTTTCTACCTTTAAAGGACAATgaaaccaat > 2:1202001/1‑230 (MQ=255) gATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGGACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCAACCTCTAAAGGACGATGCAAGCTAt > 2:134557/1‑238 (MQ=255) ccttAAACGGGACCCCAAAGACGAAAGTGA‑GAG‑GGAAACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGACTccc < 2:1137345/237‑1 (MQ=255) ttAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtg > 1:305465/1‑239 (MQ=255) ttAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGAAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGAAACAAACAATTTTCTTCTACCTCTAAAGAACGATGAACGCTATGCCTCCCtg > 2:1273357/1‑239 (MQ=255) aaaCGAGAACCCAAAGACGAAAGTGATGAG‑CG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCATCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGGGGATACAAACTATTTTTTTCTACCTCTAAAggc > 1:1352414/1‑214 (MQ=255) aaCGGGCACCCAAAGGCGAAAGTGATGAG‑A‑‑AACGCCGTCCCAGCCCAGGCCCCGCGCCGAGAG‑AAACGACCCGAAC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATGATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtgatg < 2:290560/239‑1 (MQ=255) aaCCAGAACCCAAAGACGAAAGGGATGAG‑AA‑CACC‑GCTCCCAGTCCAGGCCCTCCGCCG‑GAGCCAACGAAACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtgatg < 2:58926/239‑1 (MQ=255) agagaACCACAAGCAGAACGTGATGAG‑AA‑AACG‑CGCCCCAGTCAATGCACTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTgatgat < 1:1012652/238‑1 (MQ=255) aaCCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGACCGCTATGCCTCCCTGATGATGtat > 1:335042/1‑239 (MQ=255) aaaGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCAGCTGATGTATATCaa > 1:807001/1‑239 (MQ=255) aaGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTaaaa > 1:731026/1‑238 (MQ=255) aCG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATTAATATCAAAGAAAAACCGCCATATTCCCt > 2:18570/1‑239 (MQ=255) gtccaacgcaaTGCCCTCCGCCGAGA‑‑CAACGCACCGGTCAAAGATCATCCAGCAAAGGATGCCTCATATAGTTCCCGGGAGTCAGATTACCCGCTATACAGGAGCACAATTTG‑GGG‑GAAAAAGAAATTAACCCTGCAAATATGGAGGAAACAAATTATTTTCTTCTACCTCAAAGGGACGAGGCAGGCAATCCCTCCGTGATGGTGTATATAAAAGTAAAACCGCCATTTTCCCTTAtt < 1:434395/229‑1 (MQ=255) tCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCATTATTGCGGATCCAAACTATTTTCTCCTACATCTAAAGGACGATGCACGCTATGCACACCTAATGATGTATATCAAATTAAAACCCCCCATTTCCCTTAttt > 2:434395/1‑238 (MQ=255) ccAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCGCATGATGTAAATCAAAGTAAAACACCCATTTTCCCTTAATCTg > 2:673936/1‑239 (MQ=255) ccATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCG‑CATTTTCCCTTATTCTGTAg < 1:1305099/236‑1 (MQ=255) gCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATg > 1:378921/1‑180 (MQ=255) gCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATg < 2:378921/180‑1 (MQ=255) gCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCCTTTTCCCTTTTTTTTTAGCGaaaa > 2:391070/1‑238 (MQ=255) ccaccgccgAGAG‑AAACGTCAGGATA‑AATACCAGCCAGCGTCGGTTTGCCCATATATTTCCCTGGAGCCAGATTACCCGCGCTACAGAAGCGCAATTTGCGGG‑AAAACAGCAATAAA‑CCTCCAAATATGGAGGATACAACTTATTTTCTTCTACCTCAAAAGGACGAGGCACGTTTTGCCTCCCTGATGATGTATATAAAAGAAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAg < 1:18570/236‑1 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCACTATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGAACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCAc > 1:61445/1‑239 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCAc > 1:157806/1‑239 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCAc > 1:90305/1‑239 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCAc > 1:1070663/1‑239 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCAc > 1:1101244/1‑239 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCAc > 1:422662/1‑239 (MQ=255) ccgccgAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTAATTCTTTAGCGTAATAGCAc > 1:372002/1‑239 (MQ=255) gaaaaaCCACACGAAA‑AAGATCAGCCAGCGTACGATTGCTCATAGAGTTGCCGGGAGTCAAATTACCCGCGCAACGGTAGCGAAAATTGGGGG‑AAAACAGAAATTAC‑CCTGCAAATATTGAGGATACAAACTTTTTTCTTCTACCTCTAAAGGACGATGCACGTTATGCCTCCCTGATGATGTATATCAAAGAAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCAt < 1:673936/234‑1 (MQ=255) caaaCGACAAGCAC‑AAGCTCACCAAGCGTACTATTGCGCATAGTGTTTACGGGAGTCAGATTACCCGCGACACAGTAGCCCAAATTGGGGG‑AAAAAAGAAATTAC‑CCTGCCAATATTGAGGATACAAACTTTTTTCTTCTACCTCTAAAGGACGTTGCACGCTAGGCCTCCCTGAGGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGa < 1:716824/236‑1 (MQ=255) cAAAGACACGAAA‑AAGATCGGCCAGCGAACAATTGCCAAAATATTTTCCGGGAGCAAGATTACCCGGGCTAAAGTAGCGAAATTTGGGGG‑AAAACAGAAATAAA‑CCTGCCAATATTGAGGTTACAAACTTTTTTTTTCTCCCTCAAAAGGACGATGCACGTTATGCCTCCCTGATGATGTATATAAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACg < 1:1202001/239‑1 (MQ=255) cGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCta > 1:762644/1‑239 (MQ=255) cGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACAATCATGACCCta > 2:802798/1‑239 (MQ=255) cGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGAAAAACCGCCATTTTCCCTTATTCTGTAGCGAACAAGCCACATCATGACACTATATAc > 2:86458/1‑239 (MQ=255) agccagcGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATa > 1:1221095/1‑239 (MQ=255) ccagcGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GGAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAAAAGCACAATCATGACCCAATAAAAATGATAACAAAgg > 2:552114/1‑238 (MQ=255) ccagcGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAAAAGAACGACCATGAAGCAATATACAAAATTaaaaaga > 2:487154/1‑233 (MQ=255) cGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGcaa > 1:354431/1‑239 (MQ=255) ttCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACg < 1:1291433/115‑1 (MQ=255) ttCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACg > 2:1291433/1‑115 (MQ=255) tCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCa > 1:1040948/1‑239 (MQ=255) ccgggatccAGTTTATCCGGGCTAAAGTAGCAAAAATTGCGGG‑GAAACAGAAATTAA‑CCGGCAAATTGTGGGGATAAAACCTATTTCTTTCTACCTCAAAAGGGCGGTGCAAGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCAt < 1:309411/231‑1 (MQ=255) ggttgcattttACCCGCGTTACAGTGGCAAAATTTGGGGG‑AAAACAGAAATTAC‑CCTGCCAATATTGATGATAAAAATTTTTTTCTTCTCCCTCTAAAGGACGATGCACGTTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTa < 2:1040948/230‑1 (MQ=255) gAGTCAGATTACCCGCGCTACAGTAGCGAAATTTGGGGG‑AAAACAGAATTGAC‑CCTGCAAATATGGAGGATACAAACTTTTTTTTTCTACCTCAAAAGGACGATGCACGCTATGCCTCCCGGATGATGTATATCAAAGAAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTa < 1:1140507/238‑1 (MQ=255) tCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGAACATGACGCTATTTACATGATTAAATAGCGAAAGTGGGGAAGGGAAAAATACCATTTaaac > 2:449659/1‑238 (MQ=255) gaatttccccGCTCTAGAGTA‑CGAAAATTGGGGGAAAAACAAAAATTAC‑CCGGCAAATTTGGGGGAACAAAACTTTTTTCTTCTACCACAAAAGGAAGCTCCCCTCTATCCCCCCCTGATGATGTAAAAAAAAATAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGc < 2:157806/231‑1 (MQ=255) aGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGCAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGGGTGGATGGTAAAAATCTCATTTACACGCt > 1:1112611/1‑239 (MQ=255) aGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTCCATAGCGAAAGGGTGGATGGGAAAAATCTCATTTACACGCt > 1:305793/1‑239 (MQ=255) aTTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTa > 1:696649/1‑196 (MQ=255) aCAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACAt > 1:709427/1‑179 (MQ=255) aGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAACTCTCATTTACACGCTAGTATCGGCATAACCa > 1:661419/1‑239 (MQ=255) agccaaaaTTGCGGA‑AAAACAAAATTTAA‑CCCACCAAGTTGGGGGATAAAATCTATTTTCTCCAACCTCAAAAGGCAGACGCCCGTGATCCCTCCCTTATGATGTATAAAAAATTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACt < 1:86458/233‑1 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAGAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATCGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGCTGGTAAAAATCTCCTTTACACGCTAGAATCGGCATAACCACTaaa > 1:1291944/1‑239 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTcc < 1:160945/93‑1 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTcc > 2:160945/1‑93 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTatat > 2:484619/1‑107 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTatat < 1:484619/107‑1 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCtatata > 1:1193559/1‑169 (MQ=255) cgcAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACAt > 1:1191696/1‑172 (MQ=255) cgcAAAGTGGGGG‑AAAACGACAATTAA‑CCGCCAAATTTAGGAGATCAAAATTATTTTCTTCTACCTTAAAAGGACGATGCACGTTATGCCTCCTTGATGAGGTATAACAAAGAAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTaa < 1:134557/238‑1 (MQ=255) cAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGAACGATCATGACGCTATATACATTATTACATAGCGAACGCGTGGCTTGTAAAACTCTCGTTTACACGAAAGAATCGGCAGAACCACAAAaca > 2:1025781/1‑239 (MQ=255) cGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGGGTGGATGGTAAAAATCTCATTTACACGCTAGAATCGGCATAACCACTAAAAACCCTaa > 2:1071928/1‑237 (MQ=255) aaaaaAGAAATTAC‑CCTGCCAATATGGAGGATACAAACTATTTCCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCctc < 1:1071928/237‑1 (MQ=255) cAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtga > 2:935118/1‑80 (MQ=255) cAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtga < 1:935118/80‑1 (MQ=255) tttAC‑CCGGCAAATATTGAGAAAAAAAACTTTTTCCTTCTCCCCCTAAGGGACGATGCCCGTTATGCCTCCTTGATGATGTATACCAAAGTAAATCCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTggg < 1:578142/238‑1 (MQ=255) gCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACAt > 1:1301237/1‑142 (MQ=255) gCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCCTAACCAATAAAAACCCTATCCTCTCAACCCGGGGCAACGGa > 2:160198/1‑239 (MQ=255) cAATATTGGGGATAAAACTTATTTTCTTCTACCTCAAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATAAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATa < 1:449659/239‑1 (MQ=255) ggATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCa > 2:560289/1‑40 (MQ=255) ggATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCa < 1:560289/40‑1 (MQ=255) aCAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtga > 2:1035672/1‑52 (MQ=255) aCAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCtga < 1:1035672/52‑1 (MQ=255) aCAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGc > 1:846077/1‑203 (MQ=255) aCAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTTGcc > 1:659264/1‑239 (MQ=255) tttCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAAt > 1:105222/1‑238 (MQ=255) | TTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAG‑AG‑AACG‑CGTCCCAGTCCATGCCCTCCGCCGAGAG‑CAACGACACGATC‑AAGATCAGCCAGCGTACGATTGCGCATATAGTTTCCTGGAGTCAGATTATCCGCGCTACAGTAGCGCAAATTGCGGG‑GAAACAGCAATTAA‑CCTGCCAATATTGAGGATACAAACTATTTTCTTCTACCTCTAAAGGACGATGCACGCTATGCCTCCCTGATGATGTATATCAAAGTAAAACCGCCATTTTCCCTTATTCTGTAGCGAAATAGCACGATCATGACGCTATATACATGATTACATAGCGAAAGTGTGGATGGTAAAAATCTCATTTACACGCTAGTATCGGCATAACCACTAAACACTCTAGCCTCTGCACCTGGGTCAACTGATACGGTGCTTTGGCCGTGACAAT > NC_000913/816517‑816976 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |