| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 845,227 | A→C | 19.3% | V85G (GTG→GGG) | ybiO ← | mechanosensitive channel protein, intermediate conductance |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 845,227 | 0 | A | C | 19.3% | 106.3 / 2.9 | 66 | V85G (GTG→GGG) | ybiO | mechanosensitive channel protein, intermediate conductance |
| Reads supporting (aligned to +/- strand): ref base A (19/29); new base C (10/5); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGATACAGCGGCAGTGCGCACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCAGAAGAGGATGA > NC_000913/844989‑845464 | tcgaaccAGCGGCAGTGCGCACAGGCGAAACAGCCAGTAAAAACCAAACACTAATCCCGCGAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCa < 2:298441/233‑1 (MQ=255) aGCGGCAGTGCGCACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTTCACCCCGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCCC‑TAtttt > 1:1308864/1‑239 (MQ=255) cGGCAGTGCGCACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTTCCTTCTGTGGCCTTTTGCAGGCGGGTTTGCTCTTC‑GACCCGCGCCGGC‑GGCCC‑TAtttttt > 1:1069814/1‑238 (MQ=255) gCAGTGCGCACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGCGCCGGGGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCCTCCTCCGGGGACCCTTTGCGGCCCGGTTTTTCCTTC‑GCCCCGAGTCGGCGGGCCC‑TTTTTTTgt > 2:1337251/1‑238 (MQ=255) gTGCGCACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCCACGTCGGC‑GGGCC‑TATTTTTGGTAcc > 1:633899/1‑239 (MQ=255) gcgcACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTAc < 1:708891/236‑1 (MQ=255) gcgcAAAGGGAAACCAGCCAGTAAAAACCAAACACTAATACCGGTAACATGGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGGGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTAc < 2:745123/236‑1 (MQ=255) gaacaGGGGAATCAGCCAGTAAAAACCAAACCATAATGCCGCTAACATTGAAAAATGGGTCAGCGGATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGt < 2:191379/236‑1 (MQ=255) aaaTCAGCCAGTAAAAACCAAACCCTAATACCGCTAACATTGAAAAATGGGGCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCCC‑TATTTTTGGTACCGGTTCAGCAgg < 2:1303240/237‑1 (MQ=255) gagaaaaagCCAAACAGTAATAACACTCAACTGGAAGAAGGGGTCCGTGCATTGGTAAAG‑CTGTGTGGGTTAAACGGATTAGGGGTGGAGCCCGTGATATTGCGATAAAGTTGCCCGAAGCGGGCTGAAAGGGCTTCACCAGAATTGCGGCTGACTTCGTTGACCTTTTGCACCACGGTTTACGCTTC‑GACCAGCGTCGGC‑GGACC‑TATTTTTGGTAACGGTTCCGCAGGGGGCGt < 2:1083236/232‑1 (MQ=255) aaaaCCAAACCCTAACTCCGCAAACATGGAAAATGGGGTACGCGCATTGCTGAAG‑GTTTGTGGTATAAACGGATTATGCGGGGAGCCGGGTATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCaa < 2:869740/239‑1 (MQ=255) aaaaCCAAACACTAATTCCGCTAACATTGAAAAATGGGTTAGCGCATTGCTGAAG‑GTTTGTGGATTAAACCGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCaa < 2:422755/239‑1 (MQ=255) cAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GGTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTg < 2:1192135/239‑1 (MQ=255) acacTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCGTTTGCAGCACGGGTTTGTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTTGTACCGGTTTCGCCAGGGGCGGAgg‑gggcaagaggacg > 2:139031/1‑228 (MQ=255) aTACCGCTAACATGGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAACCGGCTTATGCGGGGAGCCGGTGATAGTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTgg < 1:389702/239‑1 (MQ=255) cTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGGCCTTTTGGAGGACGGTTTGCTCTTC‑GGCCCCCGGCGGC‑GGCAC‑TATTTTTGGTACCGGTTCACCAGGGGGCGTAGC‑GGCAAAGGGGCGCaaacgggcggtc > 2:18377/1‑229 (MQ=255) cTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCCCTTC‑GACCAGCGTCGGC‑GGCCC‑TATTTTTGGTACCGGTTCCGCAGGGGGGCTAGC‑GGCCACGGTTGGCCACTGGGCGGTc > 1:362541/1‑239 (MQ=255) cTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGGTTGCTCTTC‑GACCAGCGTCGGC‑GGCCC‑TATTTTTGGTACCGGTTCCGCAGGGGGAGTAGC‑GGCAACGGTGCGCAACTggtcggtc > 1:34381/1‑239 (MQ=255) aaactgtGAAAAATGGGTGGGGCGATTGCTGAAG‑GTTTGGGGATTAAACGGGTTAGGGGGGGAGCCGGGGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGGGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCa < 2:1080112/233‑1 (MQ=255) aaaagtGAAAAAGGGGTCAGGGCATTTCTGAAG‑GTTGGTGGATTAAACGGCTTGTGGGGGGAGCCGGGGATATGTCGATAAAGGTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGAACTTTTGCAGCACGGGTTGCTCTTC‑GACCAGCGGCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCaa < 2:1352694/234‑1 (MQ=255) aaCATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCCTTTGCAGCACGGTTTGCTCTTCGGACCA‑CGCTGGC‑GGCCCTTATTTTTGACGCGGGTT‑AGGCCGGGGCGTAGC‑GGGAAAGGTGCGACCCTGGTCgcggaa > 2:110333/1‑234 (MQ=255) aaCATGTAAAAAGTGGGCAGCGCAGTGGTGTAG‑GGTTGTGGATTAAACGGGTTTGGGGGGGGGGCGGTGAAATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCaa < 2:990284/239‑1 (MQ=255) ttGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCCCGGTTTGCTCTTC‑GACCAGGGTCTGC‑GGCCC‑TATTTTTGGTACCGGTTCAGCAGGGGGGGCAGC‑GGCCACGGGGGGCAACCGGTGGGTCaaacct > 2:420347/1‑235 (MQ=255) ttGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAAC‑GGCAACCGTGGGCAACTGGTCCATCAActct > 1:526452/1‑239 (MQ=255) aattggggtcgcgcATTGCTGAAG‑TTTTGTGGATTAAACGGCTTAGGGGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAc‑g < 2:673671/229‑1 (MQ=255) aaaTGGGTCGGGGCTTTGTTGAAG‑GTTTGGGGAGTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGCCTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTGTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAc‑g < 2:564139/239‑1 (MQ=255) gggTCAGGCCATTGGTGGAGTGTTTG‑GGATTAAACTGCTTTGGGGGGGGGCGGGTGATATTGCGAAAAAGGTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAg < 2:891517/239‑1 (MQ=255) ggTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAg < 1:1337251/238‑1 (MQ=255) aaG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGTCTTCGGTGACCTTTTTAAGCCCGGTTTGCTCTTC‑GACCGCCGCCGGG‑GGCGC‑TTTTTTTTGTTCCGGGTCATCAGGGGGCGTGGCGGGCAAC‑GTGCACACCTGGGCGGTCAACTCTTTAC‑GCGAGGGGGCAATATCCaagc > 2:565952/1‑235 (MQ=255) aaG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTAACGGTTCAGCAGGGGGCGTAGG‑GGCAACGGTGCGCAACTGGTCGATCAACCCTTTAC‑GCGAGGGGGCATTTTCCAGcac > 1:1360511/1‑239 (MQ=255) ttGTGGATTAAACGGGTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGGGGGCAACTGGTCGATCAACTCTTTAC‑CCCAGGGGTCATTATCCAGCAAATcc > 1:801711/1‑238 (MQ=255) ttttgATTAAACCGCTTAGGGGGGGAGCCGGTTAATTTGGGATAAATGTGCCCGAAGCGGGCGGAAAGGGCTTCCCCATAATGGCGGCTGCCTTCGGTGACCTTTGTCAGCCCGGTTTGCTCTTC‑GACCAGCGTCGGC‑TGCCC‑TATTTGTGGTCCCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑c < 2:1376391/235‑1 (MQ=255) tgGATTAAACGGTGTAGGGGGGGAGCCGGTGATATTCCGATAAAGTTGCCCGAAGCGGGGGGAAAGGGCTTCACCATAATGGCGGCTGACTCCGGTGACTTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCa < 2:1069814/239‑1 (MQ=255) tAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCa < 2:917256/135‑1 (MQ=255) tAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCa > 1:917256/1‑135 (MQ=255) tAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGGAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCCGCACATCCG‑CCAGGgc > 1:260634/1‑238 (MQ=255) aaaCGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCa < 1:28198/221‑1 (MQ=255) gAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGGCTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GGCCAGCGGCCGC‑GGCAC‑TATTTTTGGGACCGGGTCAGCAGGGGGCGTAGC‑GGCGACGGTGGGCCACCGGTCGGTCCACCCTTTAC‑CCGAGGGGGCATTATCCAACACATCCGCCCCGTGCCCCACAGCCCCCttttt > 2:1206264/1‑239 (MQ=255) atTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGGTCAACTCTTTAC‑GCGAGGTGCCATTATCCAGCACATCCG‑CCAGTGCGCCTTAGGCCGCTTTTTTTTGTTCGata > 1:655023/1‑238 (MQ=255) cGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCaa < 1:703717/164‑1 (MQ=255) aTAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGGTCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGt > 1:859858/1‑238 (MQ=255) cccGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGCTCAGCAAACCCTTAC‑CCAGGGGGGCCTTATCCAGCCCATCCG‑CCCAGGCGCCCTAAGCCCCTTTTTTTTTTTTGATATCCGGTTCCCGGGGCg > 2:486545/1‑239 (MQ=255) gaggcgggcggAAAGGGCTTCACCATATTGGCGGGTGACTTGGGTGCCCTTTGGCAGACGGGTTTGCTCTTC‑GACCGGCGTGGGC‑GGCAC‑TATTTTGGGTACCGGTTAAGCAGGGGGCGTAGG‑GGCAACGGTGCGCAACTGGTCGATCACCTCTTTAC‑GGGGGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGtt < 2:1280161/236‑1 (MQ=255) ggggggggAGAGGTTTTCCCCATAATGGGGGGTGGTTTGGGTGACCTTTTGCAGCAGGGTTGCCTCTGC‑GACCAGCGTCGGG‑GGCTA‑TTTTTGTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACGGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGtt < 2:260634/234‑1 (MQ=255) tgAAAGGGTTTCCCCATAAGGGGGGGGGACCTGGGGGACCTTTTGCAGCGGGGTTTGCTCTCT‑GACCCGCGTGGGG‑GGCAC‑TATTTTTGGTACCGGTTCAGCGGGGGGCGTAGG‑GGCAACGGTGCGCCACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGtt < 2:1015845/237‑1 (MQ=255) ggAAGGGGTTTCCCCTTATGGGGGGCTGTCTTGGGTGACCTTTTGCCGCCCGTTTTGCTTTTG‑GACCAGCGTCGGC‑GGCAC‑TTTTTTTGGTCCCGTTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCACCTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTg < 2:34381/239‑1 (MQ=255) cTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCCTAGGCCGCTTTTTTTTGTTCGGTATCCGGTTCCGGGGCCgggt > 1:776050/1‑220 (MQ=255) cTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAg > 1:274492/1‑225 (MQ=255) cTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCcgt < 1:893906/238‑1 (MQ=255) cTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGGGTCATTATCCAGCACATCCG‑CCAGAGCGCCATAGGCCGCTTTTTTTTGTTCGGTATCCGGTTCCGGGGCCGGTTCAGTCGTTGGGTCcgtt > 1:1127342/1‑239 (MQ=255) tcccaaaaaTGGGGGCTGACTTCGGTGCCCTTTTGCAGCCCGGTTTGCTCTTC‑GACCAGGGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTCGAGTCcgttgt < 1:1052195/232‑1 (MQ=255) tAATGGCGGCTGACTTCGGTGACCTTTTGGAGGCCGGTTTGCCCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCcgttgtcgttgt < 1:18377/239‑1 (MQ=255) tAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCCACGGTGCGCCACTGGTCGGTCAACTCTTTAC‑GCGAGGGGGCATTTTCCAGCACCTCCG‑CCCGGGCGCCCTAGGCCGCTTTTTTTTTTTCGCTATCCGGTTCCGGGGCCGGTTCGGCCGTTGGGTCcgttttggttgt > 2:893906/1‑239 (MQ=255) tAATGGCGGCCGGCTTCGGTGAGCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGGCCGC‑GGCCC‑TATTTTTGGTACCGGTTCAGCTGGGGGCGTAGC‑GGCAACGGCGCGCAAATGGTCGATACACTTCTTAC‑GCGAGGGGTCATGATCCAGCACACACG‑CCCATGCGCCCTAGGGCGCGTTTTTTTGTTCGCAATCCGGTTCCGGGGGCGGGTCAGTGGTTGGGTGcgttgtcgttgg > 2:1303833/1‑238 (MQ=255) gcTGACTTCGGTGACCTTTTGCAGCACGGTTTTCTCTTC‑GACCAGCGTCGGC‑GGCCC‑TATTTTTTGTACCGGTTCAGCCGGGGGCGTAGC‑CGCCACGGTGCGCACCTGGTCGTTCCACTCTTTACTGCG‑GGGGTCCTTATCCAGCCCCTCCG‑CCCGTCCGCCCTGGGCCCCTTTTTTTTTTTCCATATTCGGTTCCGGGGCCGGTTTCGGCGGTTAGTCCGTTTTTGTTGTgggttgca > 2:653988/1‑233 (MQ=255) gcTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCAGTTCAGCAGGGGGCGGAGC‑GGCAACGGGGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGGGTCATTATCCAGCACATCCG‑CCAGGGCGCCCTAGGCCGCCTTTTTTTGTTCGTATTCCGGTTCCTGGGCCGGTTACGTGTTTGAGTCCCTTGTGTTggtggtgggta > 2:553922/1‑234 (MQ=255) tgtttCGGTGACTTTTTGCTGCACGTTTTGCTCGTC‑GGCCAGGGTCGGC‑GGCCC‑TTTTTTTGGTACCGGTTCAGCGGGGGGCGTGGC‑GGCAACGGTGCGCAACTGGTCGATCAACTTTTTAC‑GCGAGGTGTCATTATCCAGCCCATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGc < 2:1308864/236‑1 (MQ=255) cTTCGGTTACCTTTTGCAGCACGGTTTGCTCTTC‑GGCCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCg < 1:486545/239‑1 (MQ=255) ctttgtcagccCGGTTTGCTTTTC‑GTCCAGGGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGAt < 1:17455/232‑1 (MQ=255) tGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACcgc < 1:420347/239‑1 (MQ=255) cccttttttCTCTTC‑GCCCGGCGGCGGC‑GGCAC‑TATTGTGGGTCCCGTTTCGGCAGGCGGTGGGGC‑GGCAACGGTGCGAAAAGGGCCGACCAACCCTGTCC‑GCGAGGGTCCATTTCCCAGCCCACCCG‑CCCGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTGCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTggg < 2:691641/234‑1 (MQ=255) aCGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAA‑TATTGTTGGGACCGGGTCAGCAGGGGGCGTAGC‑GGCAACGGGGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGGGTCATTGTCCAGCACATCCG‑CCAGTGAGCCACAGGCCGCATTTTTTTGTTCGATATCCGGTTCCGGGGCCGGGTCAGTCGTTATGTCCGTTGTGGTTGTGGGTGCAACCCCGGGTTGGGATACGGGGTgggg > 2:982364/1‑238 (MQ=255) tttGCTTTCC‑GGCCCGCGTGGGG‑GGCCG‑TATTTTTGGTCCCGTTTCGGGAGGGGGCGTGGC‑GGAACCGGTGCGCACCTGGTGGATCAACTCTTTCC‑GCGGGGTGTTATTACCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGt < 2:1360511/239‑1 (MQ=255) tC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTTTCTTTGTGGTTTTACAGCCGGGTTTGGTAACCCCTGGGGCAGGGGCGccccg > 2:800123/1‑237 (MQ=255) tC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTTCCGTTGTGGTTTTCAAGCCGGGTATGGGTACCGCGTGGGCAGGGGGGccccc > 2:748295/1‑237 (MQ=255) gACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGAGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGCGTCCGTTGTCGTTGTGGTTTTAACCCCGGGTGTGGATACCGCGCGGGCTGGTGCGCCcagca > 1:869151/1‑239 (MQ=255) cGTGGGC‑GCCAT‑TTTTTTTGGTCCCGTTTACGCGGGGGGCGTAGC‑GGCAACGGTGCGCACCTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCaga < 2:859858/239‑1 (MQ=255) gTCGGG‑GGCAC‑TATTTTTGGTCCCGGTTCAGCGGGGGGAGTAGG‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GGGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCaga < 1:553922/238‑1 (MQ=255) cggc‑ggCTT‑TTTTTTTGGTCCCTGTTCGGCAGGGGGCGTAGG‑GGCAACGGTGCGAAACTGGTCAATCACCTCTTTAC‑GCGAGGTGTCATTATCCAGCACTGCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCagaag < 2:1127342/238‑1 (MQ=255) aC‑TTTTTTGGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACCCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCAGAAGAGGATGa < 1:863415/238‑1 (MQ=255) aC‑TGTTTTTGGTGCGGTTTCAGCGGGGGGGGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTAGCCAGCCCATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCAGAAGAGGATGa < 1:653988/238‑1 (MQ=255) | GCGATACAGCGGCAGTGCGCACAGGCGAATCAGCCAGTAAAAACCAAACACTAATACCGCTAACATTGAAAAATGGGTCAGCGCATTGCTGAAG‑GTTTGTGGATTAAACGGCTTATGCGGGGAGCCGGTGATATTGCGATAAAGTTGCCCGAAGCGGGCGGAAAGGGCTTCACCATAATGGCGGCTGACTTCGGTGACCTTTTGCAGCACGGTTTGCTCTTC‑GACCAGCGTCGGC‑GGCAC‑TATTTTTGGTACCGGTTCAGCAGGGGGCGTAGC‑GGCAACGGTGCGCAACTGGTCGATCAACTCTTTAC‑GCGAGGTGTCATTATCCAGCACATCCG‑CCAGTGCGCCATAGGCCGCTTTTTTTTGTTCGATATCCGGTTCCGGGGCCGGTTCAGTCGTTGAGTCCGTTGTCGTTGTGGTTGTAACGCCGGGTATGGATACCGCGTGGGCAGGTGCGCCCAGCAGGCAGAAGAGGATGA > NC_000913/844989‑845464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |