Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,097,266 C→A 12.3% intergenic (+41/+55) hisI → / ← wzzB phosphoribosyl‑AMP cyclohydrolase and phosphoribosyl‑ATP pyrophosphatase/regulator of length of O‑antigen component of lipopolysaccharide chains

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,097,2660CA12.3% 339.0 / 9.1 144intergenic (+41/+55)hisI/wzzBphosphoribosyl‑AMP cyclohydrolase and phosphoribosyl‑ATP pyrophosphatase/regulator of length of O‑antigen component of lipopolysaccharide chains
Reads supporting (aligned to +/- strand):  ref base C (63/60);  new base A (2/17);  total (66/78)
Fisher's exact test for biased strand distribution p-value = 9.12e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 146 total aligned reads displayed.

TATGCCAGCGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATCAAGATCATCAA  >  NC_000913/2097028‑2097493
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                   
tATGCCAGCGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGc                                                                                                                                                                                                                                     >  1:752992/1‑239 (MQ=255)
       gCGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaaaa                                                                                                                                                                                                                              >  2:798671/1‑239 (MQ=255)
        cGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAAc                                                                                                                                                                                                                             >  1:611907/1‑239 (MQ=255)
        cGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGGGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAAc                                                                                                                                                                                                                             >  2:1053836/1‑239 (MQ=255)
          gCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACgg                                                                                                                                                                                                                           >  1:1205914/1‑239 (MQ=255)
            ccccaaCGCCTTGCGCAAAAAGGGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGGACATGACCCGTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGAAAAAAAACGGGc                                                                                                                                                                                                                         <  2:919574/235‑1 (MQ=255)
            cccAAAGGCCTTGCGCTGAAAGTGGGTGAAGAAGGGGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGTTTTGATGTGACCAACGAGGGGTCTGATTTGATGTATCTCCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGc                                                                                                                                                                                                                         <  2:700531/238‑1 (MQ=255)
                atcggaTTGCCCAGAAATGGGGGGAAGGAGGCGTTGAAACCGTGTTTGAAGCAACGGTACATGGTCCTTTTGAGCTTACCAACGAGCGGGCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATGTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGGTGCCGCACCCGGCAAAACAACGGGCAAgg                                                                                                                                                                                                                     <  2:425827/234‑1 (MQ=255)
                acccccttGCGCAGCAGAGGGGTGAAGGAGGGGGGGAACCCCGGCTGGGAGCAACGGGTCCTGCCCGCTTTGAGCGGGACAACGAGGCGGCTGATTTGATGTATCCCCTGTTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAgg                                                                                                                                                                                                                     <  2:775526/233‑1 (MQ=255)
                aaCGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGAGGGGAAATTGTTTCCGCATCCGGAAAAAAAAAGGGCAAgg                                                                                                                                                                                                                     >  2:395426/1‑239 (MQ=255)
                 accgcttGCGCAGAATGGGGGTTAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGGTTTGGGCTGACCAACGAGGCGTCTGATTTGATTTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAg                                                                                                                                                                                                                      <  2:1083039/232‑1 (MQ=255)
                     atggcgcAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTca                                                                                                                                                                                                                <  1:395426/236‑1 (MQ=255)
                     aTTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGCCGGTAATTGAGAACTTGCGTAAACGGAATCAGTACGTTGCGGGGGAAGCGGATGCGAAATTGTTGCCGCACCCGCACAAAAAAAGGGCAAGgggta                                                                                                                                                                                                                 >  2:313279/1‑237 (MQ=255)
                        gcgcAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTACCGACGGTAATTGGGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGGTGCCATATTTTTGCCCCACCCGTCAAAAAAACGGGCAAGGTGAcacc                                                                                                                                                                                                              >  2:782118/1‑238 (MQ=255)
                        gcgcAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGGAAGAGGAGGCGGAATTGTTGCCCCACCCGGCAAAAAAAAAGGAAAGAGGTcaca                                                                                                                                                                                                              >  2:65254/1‑237 (MQ=255)
                           cAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCAccc                                                                                                                                                                                                          <  2:1305355/239‑1 (MQ=255)
                           cAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAACGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGGGTcacaac                                                                                                                                                                                                            >  1:1083039/1‑237 (MQ=255)
                                    ggggaagaaGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCttt                                                                                                                                                                                                  <  1:798671/235‑1 (MQ=255)
                                        aagaagGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGGAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGGGTCACCACCCTGCCCTTTTTCtt                                                                                                                                                                                             >  1:1194991/1‑239 (MQ=255)
                                            agGCGTGGAAACCGCGCTGGCAGCAACGGTACAGTCCCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTaa                                                                                                                                                                                          <  1:782118/238‑1 (MQ=255)
                                               cGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCCCATCCGGCAAAAAAACGGGCAAGGGGTCACAACCCTGCCCTTTTTTTTTaaaaac                                                                                                                                                                                      >  2:667424/1‑237 (MQ=255)
                                               cGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGGAAACGCCATCAGTGAGGTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGGAAAAAACGGGGCAAGGTGTGCCCCCCCTGCACCTTTTTTTTAAAAcc                                                                                                                                                                                      >  2:249854/1‑239 (MQ=255)
                                                gTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGGGAACCTGAGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGGGTCACCACCCGTCCCTTTTTCTTTaaaaaca                                                                                                                                                                                     >  2:691111/1‑236 (MQ=255)
                                                             tGGCATCCACGGTTCTTGGCCGCTTTGGGCTGGCCAACGGGGCGTCTGATTTGATGTATCCCCTGCTGGTTGTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACtt                                                                                                                                                                         <  2:269579/238‑1 (MQ=255)
                                                             tGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACtt                                                                                                                                                                         <  1:1016683/238‑1 (MQ=255)
                                                             tGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTGGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACtt                                                                                                                                                                         <  1:691111/238‑1 (MQ=255)
                                                              ggCAGCATCGGTTCTTGACCGCTTTGGGCTGACGAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcg                                                                                                                                                                       <  2:333040/239‑1 (MQ=255)
                                                              ggCAGCAACGGTAAATGACCGCTTTGAGCCGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTcg                                                                                                                                                                       <  1:1213791/239‑1 (MQ=255)
                                                                  gcaACGGTACATGCCCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGt                                                                                                                                                                    <  1:892668/238‑1 (MQ=255)
                                                                      ccgTACATTACCGTTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTaa                                                                                                                                                               <  1:786596/237‑1 (MQ=255)
                                                                         tACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGa                                                                                                                                                                                    >  2:252908/1‑215 (MQ=255)
                                                                           cATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGTTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCg                                                                                                                                                          <  1:1253018/239‑1 (MQ=255)
                                                                             tGACCGCTTTGAGCTGACCAACGAGGCGTCGGATTTGATGTATCACCTGGTGGTGTTGGTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTa                                                                                                                                                        <  1:1049336/239‑1 (MQ=255)
                                                                              ggccGCTTTGAGGGGACCAACGAGGCGTTTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGAGCAGGGGCTGGATTTAACGACGGTAAGTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTag                                                                                                                                                       <  1:566423/237‑1 (MQ=255)
                                                                              gcccGTTTTGGGCTGACCAACGGGGCGTTTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTag                                                                                                                                                       <  2:398331/237‑1 (MQ=255)
                                                                              gACCGTGTTGAGCTGACCAACGAGGCGTCTGATTTGATGGATTCCCGGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTag                                                                                                                                                       <  2:1194991/239‑1 (MQ=255)
                                                                              gACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCCAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACACAAAAAATTAATTCGCGGTGTAATTgggaag                                                                                                                                                       >  2:1202414/1‑234 (MQ=255)
                                                                                ccGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTTCCGCATCCGGCAAAAAAACGGGCAAGGGGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGAATACTTCGCGTTGTCATTGCGTagag                                                                                                                                                     >  1:1086715/1‑239 (MQ=255)
                                                                                ccGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGGGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAAATTACTTCGCGTTGTAATTGCGTaaa                                                                                                                                                      >  1:963846/1‑236 (MQ=255)
                                                                                   cTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGCAATTGCGTAGAGCAt                                                                                                                                                  >  1:208461/1‑239 (MQ=255)
                                                                                   cTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGGGTCACCCACCGGCCCTTTTTCTTTAAAACAGAAAAAATTAATTCCCGTTGTAATTGCGAAGAGCAt                                                                                                                                                  >  2:67599/1‑239 (MQ=255)
                                                                                     tttggCTGACCAAGGGGGCGTGTGATTTTATGTTGCACCTGTTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTa                                                                                                                                                <  2:611907/235‑1 (MQ=255)
                                                                                     tttggCTGACCAAGGAGGGGTGTGATTTTAGGTATCCCCTGCTGGTGTTGTTGCAGGAACAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTa                                                                                                                                                <  2:957898/235‑1 (MQ=255)
                                                                                     ttGAGCTGACCAACGGGGCGTCTGATTGGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTa                                                                                                                                                <  1:1179803/239‑1 (MQ=255)
                                                                                     ttGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGGAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGCGTACCCACCCTGCCCTTTTTCTTTAAAACCGAAAAGCTTAATTCCCGTTTGAATTGCGTAGACAATTa                                                                                                                                                >  2:853857/1‑239 (MQ=255)
                                                                                     ttGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTGGCGGGGTAAGCGGATGCGATATTGTTGCCGCGTCCGGCAAAAAAACGGGCAAGGTGTCACACCCCTGCCCTTTTTCTTTAAAACCGACAAGATTACTTCACGTGGTATTTGCGTAGAGCAtt                                                                                                                                                 >  1:590703/1‑238 (MQ=255)
                                                                                        aGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGCCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGCTGTAATTGCGTATAGCATTACg                                                                                                                                              >  1:255925/1‑238 (MQ=255)
                                                                                             aCCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGGGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTAATTCCCGTTGTAATTGCGAAAAGAAATACGCCCCaa                                                                                                                                        >  2:428478/1‑238 (MQ=255)
                                                                                              ccAACGGGGCGTCTGATTTGTTGTATCACCTGCTGGTGTTGGTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAg                                                                                                                                        <  1:1359411/238‑1 (MQ=255)
                                                                                                aaCGAGGCGTCTGATTTGATGTATCCCCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGcac                                                                                                                                     <  1:823221/239‑1 (MQ=255)
                                                                                                       cGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCCTCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAAAGCATTACCCCCCAGCAAAAAcccc                                                                                                                              >  2:172763/1‑239 (MQ=255)
                                                                                                         tCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGTGCAAGGGGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGAAGAGCATTACGCCCCAGAAAAAAcccccc                                                                                                                            >  2:282302/1‑237 (MQ=255)
                                                                                                            gATTTGATGTATCCCCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGcc                                                                                                                         <  1:282302/239‑1 (MQ=255)
                                                                                                                   tGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATg                                                                                                                  <  1:1053836/239‑1 (MQ=255)
                                                                                                                      aTCCCCTGCGGGCGTTGTTGCAGGATCAGGGGCGGGATTTAACGACGGTAATTGAGAACCTGCGGAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCa                                                                                                               <  1:1123006/239‑1 (MQ=255)
                                                                                                                                    ttgttgCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTaa                                                                                                                                                               <  1:298450/177‑1 (MQ=255)
                                                                                                                                     ttttgGAGGGTCGGGGGTTTGATTTAACGGTGGTAATTGAGAACCTGCGTAACCGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGAAAAAAAACGGGCAAGGTTTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGcc                                                                                                <  2:588022/237‑1 (MQ=255)
                                                                                                                                        tgCAGGATCAGGGGGGGGATTTAAGGAGGGTAATTGAGAACCTGGGTAACCGGCATCAGTGAGTGGGGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGa                                                                                             <  2:1218075/239‑1 (MQ=255)
                                                                                                                                           aGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACACCCCAGCACAATCCCCGCGCCAACCATCCCACCCACCAACACcccccaaacc                                                                                          >  2:91999/1‑233 (MQ=255)
                                                                                                                                              aTCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCCTTGTAATTGCGTAGAGCCTTACCCCCCAGCACAATCCCCCCCCCAACCATGCCCCCCAACACCACCCCCCGAACCacg                                                                                       >  2:129091/1‑237 (MQ=255)
                                                                                                                                                 aGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGCAAAGATTACTTCGCGTTGGAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATACCACCACGACACACCGCCAAAAACAAggaa                                                                                    >  2:650210/1‑237 (MQ=255)
                                                                                                                                                    ggCTGGATTTAACGCCGGTAAGTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTCCTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTaa                                                                                   <  1:432791/237‑1 (MQ=255)
                                                                                                                                                         gATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCCTTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTCATTGCCtt                                                                            >  1:9521/1‑239 (MQ=255)
                                                                                                                                                                   cgttatttGGGAACCTGGTTAACCGGCTTCAGTGGGTTGGGGGGTAAGGGGTTGGGATTTTGTTGCCGCATCCGGAAAAAAAACGGGCAAGGTGTCACCCCCCTGCCCTTTTCCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCAAAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTa                                                                  <  2:632970/233‑1 (MQ=255)
                                                                                                                                                                   cgGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGCAATTGCCTTTTTCGGGCTa                                                                  >  1:524059/1‑239 (MQ=255)
                                                                                                                                                                       aaTTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCac                                                              <  1:167630/239‑1 (MQ=255)
                                                                                                                                                                        aattggaACCTGGGTAAAGGGCACCGGTGAGTGTGGGGGTAAGGGGATGCGATATTTGTGCCGCAACCGGAAAAAAAACGGGCAAGGTGTCACCCCCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCacg                                                             <  2:1197171/234‑1 (MQ=255)
                                                                                                                                                                        aTTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTCCTTCGCGTTTTAATTGCGTAGAGCATTACCCCCCAGCACAATCCCCCCCCCACCCATGCCACCCAGCAGCACCGCCAGAAACAAGGAAATTGCCTTTTTCGGGCTATAaca                                                             >  2:1352315/1‑238 (MQ=255)
                                                                                                                                                                             gaacaggCGTAAACGGCATGAGTGAGTGGCGGGGTAAGCGGATGCGATATTGATGCCGCATCCGGAAAAAAAACGGGCAAGGTGTCACCTCCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGAAATTGCGGAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCAcgacga                                                         <  1:238293/232‑1 (MQ=255)
                                                                                                                                                                              aaCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTaa                                                                                                                                                               >  2:176492/1‑135 (MQ=255)
                                                                                                                                                                              aaCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTaa                                                                                                                                                               <  1:176492/135‑1 (MQ=255)
                                                                                                                                                                              aaCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATAAAGGTAATTGCCTTTTTCGGGCTATCAAgaagaaa                                                       >  2:666271/1‑238 (MQ=255)
                                                                                                                                                                              aaCCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGAAAAAAAACGGGCAAGGTTTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGaa                                                        <  1:130885/238‑1 (MQ=255)
                                                                                                                                                                                ccTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATc                                                                                                                                 <  2:167581/163‑1 (MQ=255)
                                                                                                                                                                                ccTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATc                                                                                                                                 >  1:167581/1‑163 (MQ=255)
                                                                                                                                                                                ccTGCGTAAACGGCATCAGTGAGTTGCGGGGAAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTAACCACCCTACCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCAAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAAACAAGGTAATTGCCTTTTTCGGGCTATCACGCCGAATAg                                                     >  1:993226/1‑239 (MQ=255)
                                                                                                                                                                                    cGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTaa                                                 >  1:772640/1‑239 (MQ=255)
                                                                                                                                                                                    cGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTATAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTaa                                                 >  1:932769/1‑239 (MQ=255)
                                                                                                                                                                                       aaaCGGCATCAGTTAGTTGCGGGGTAAGCGGATGCGATATTTTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACa                                               <  1:919560/238‑1 (MQ=255)
                                                                                                                                                                                          cGGCATCAGGGAGTTGGGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGAAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCgg                                           <  1:172763/239‑1 (MQ=255)
                                                                                                                                                                                              aTCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTtc                                       >  1:498170/1‑239 (MQ=255)
                                                                                                                                                                                               tCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGACTAGGTAACACCGGTTtca                                      >  1:319138/1‑239 (MQ=255)
                                                                                                                                                                                               tCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTtca                                      <  1:428478/239‑1 (MQ=255)
                                                                                                                                                                                                cAGTGAGTTGAGGGGTAAGCGGATGCGATATGGTTGCCGAATCCGGAAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTtcat                                     <  1:1187046/239‑1 (MQ=255)
                                                                                                                                                                                                    gAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATcac                                  <  1:129091/238‑1 (MQ=255)
                                                                                                                                                                                                      gTTGCGGGGTAAGCGGATGCGATATTGTTGCCGACTCCGGAAAAAAAACGGGCAAGGTGTCACCTCCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACAt                                <  1:967454/238‑1 (MQ=255)
                                                                                                                                                                                                       ttGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATaa                              >  1:15720/1‑239 (MQ=255)
                                                                                                                                                                                                            gggTAAGCGGTTGCGATATTGTTGCCGCAACCGGAAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGt                          <  1:650210/238‑1 (MQ=255)
                                                                                                                                                                                                            gggTAAGCGGTTGCCATATTGTTGCCGGATCCGGAAAAAAAACGGGCAAGGTGTCACCGCCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGt                          <  1:1042599/238‑1 (MQ=255)
                                                                                                                                                                                                            gggTAAGCGGATGCGATATTGTTGCCGCATCCGGAAAAAAAACGGGCAAGGTGTCACCCCCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGt                          <  1:65254/238‑1 (MQ=255)
                                                                                                                                                                                                             ggTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaaaa                                                                                                                                                                                                                              >  1:117363/1‑41 (MQ=255)
                                                                                                                                                                                                             ggTAAGCGGATGCGATATTGTTGCCGCATCCGGCaaaaaaa                                                                                                                                                                                                                              <  2:117363/41‑1 (MQ=255)
                                                                                                                                                                                                                aaGCGGTTGCGTTTTTGTGGCCGCATCCGGAAAAAAAACGGGCAAGGTGTCCCCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCa                     <  2:1205914/239‑1 (MQ=255)
                                                                                                                                                                                                                    ggATGCGATATTGTGTCCGCTGCCGGAAAAAAAACGGGCAAGGTGTCACCCCCCTGCCCTTTGTCTTTAAAACCGAAAAGATTTCTCCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGa                  <  1:607385/238‑1 (MQ=255)
                                                                                                                                                                                                                        gcgttttttttgCCCCATCCTGCAAAAAAACGGGCCAGGTGTCACCACCCTGCCCTTTTTCTTAAAAACCGAAAAGAGTCCTTCGCGTTGTAATTGCGTAGAGCTGTACGCCCCAGCTCAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATc             <  2:319138/230‑1 (MQ=255)
                                                                                                                                                                                                                                 ttgCCGCACCCGGGAAAAAAACGGGCAAGGTCTCACCCCCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTGGGGTTGTAATTGCGTAGGGCATTAGGCCCCAGCACAATCCCCGCGGCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATCAAGatcatc    <  1:701236/239‑1 (MQ=255)
                                                                                                                                                                                                                                 ttccccataccGGAAAAAAACAGGGAAAGGTGTCCCCCCCCTGCCCTTTTTCTTTAAAACCAAAAAGATTTCTCCGCGTTGGAATTGCGTAGAGCATTACGCCCAAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATCAAGatcatc    <  2:9521/230‑1 (MQ=255)
                                                                                                                                                                                                                                 ttcccGCTTCAGGAAAAAAAACGGGATGTGGGTCACCCCCCAGCCCTTTTTCTTTAAAACCGAAAAGATTCCTCCGCGTTGTAAGTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTCTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATCAAGatcatc    <  2:524059/236‑1 (MQ=255)
                                                                                                                                                                                                                                   gCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCATAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCttttt                                                                         >  2:118210/1‑168 (MQ=255)
                                                                                                                                                                                                                                   gCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATCAAGATCATCaa  >  1:66343/1‑239 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                   
TATGCCAGCGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGAGTTGCGGGGTAAGCGGATGCGATATTGTTGCCGCATCCGGCAAAAAAACGGGCAAGGTGTCACCACCCTGCCCTTTTTCTTTAAAACCGAAAAGATTACTTCGCGTTGTAATTGCGTAGAGCATTACGCCCCAGCACAATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCGGGCTATCACGACGAATAGGTAACATCGGTTTCATCACATAACGGTAAGCATGAATATCAAGATCATCAA  >  NC_000913/2097028‑2097493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: