Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,815,007 T→C 13.4% E478G (GAG→GGG)  gshA ← glutamate‑cysteine ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,815,0070TC13.4% 253.0 / 2.0 104E478G (GAG→GGG) gshAglutamate‑cysteine ligase
Reads supporting (aligned to +/- strand):  ref base T (35/49);  new base C (13/6);  total (48/56)
Fisher's exact test for biased strand distribution p-value = 4.33e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 104 total aligned reads displayed.

CTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATCGCGGAACAGATCTTTA  >  NC_000913/2814774‑2815222
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                             
ctttcttCCCAGGCGATTTTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCa                                                                                                                                                                                                                          <  1:599156/239‑1 (MQ=255)
  tttttcCCCGGCGGGTTGGAGTTGATGAAATACCCGCATTTTTTATCATCATCCCTTAATTCAGAGATGAAATTTTGGCCACTCCCGATGGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACg                                                                                                                                                                                                                        <  2:954150/236‑1 (MQ=255)
  ttcttcCCCGGGTAATCTGGGTTTTTGAAAGGCCGGTCTTTTTTTCCATCCTCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGGTGGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACg                                                                                                                                                                                                                        <  2:144660/239‑1 (MQ=255)
     ctcCCCGGGGTGTTTGATTTTATGAAAGGTGCGCTTTTGTTATGCTCATCCCTGAATTCAGGGATGAAATTTTGGGCACTCACGGGTGGCCTTTTTCTTTTCTGGCAGGCGTGTTTTT‑CCAGCCACCCCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACg‑cag                                                                                                                                                                                                                    <  2:744747/238‑1 (MQ=255)
           ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCCGAATTTCCAGCGGCCCTTCACG‑ccgca‑ggt                                                                                                                                                                                                              >  1:954150/1‑236 (MQ=255)
           ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GAt                                                                                                                                                                                                              >  1:812653/1‑238 (MQ=255)
           ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCACCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCCCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACc‑cagccaatt                                                                                                                                                                                                              >  1:11343/1‑234 (MQ=255)
                 tCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACgg                                                                                                                                                                                                         >  1:780183/1‑237 (MQ=255)
                 tCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑CCGCAGAATTTCCCGCGGCCCTTCACG‑CAGCA‑GATTAAggga                                                                                                                                                                                                       >  2:212466/1‑237 (MQ=255)
                 tCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCCCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCCCTTTCCG‑CAGCA‑GATAACggaa                                                                                                                                                                                                       >  2:350270/1‑237 (MQ=255)
                     tgtttttGAAAGGTGGGCTTTTTTTATCCTCCGCCCTTAATTCAGAGAGGAGTTTTTGGCCACCCACGAGTGGCCTTTTTCTTTTCTGGCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑Ct                                                                                                                                                                                                  <  2:910476/233‑1 (MQ=255)
                     aGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGCCGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCCCTTCACG‑CAGCA‑GCTTACGGTAGG‑Ct                                                                                                                                                                                                  >  1:1329498/1‑239 (MQ=255)
                     aGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCCCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCCCTTCACC‑CAGCA‑GATTACggaaag                                                                                                                                                                                                     >  2:1063489/1‑233 (MQ=255)
                      gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCCACAAAATC‑CTCTTC‑GCGCAGAATTTCCACCGGCCCTTCCCG‑CAGCA‑AATTACGGAAGG‑Ct                                                                                                                                                                                                  >  2:445299/1‑238 (MQ=255)
                          atGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACCAAATC‑CTCTTC‑CCGCAGAATTTCCAACGGCCCTTCACG‑CCGCA‑AATTACGGTAGG‑GTTCTGc                                                                                                                                                                                             >  2:1085213/1‑239 (MQ=255)
                           ttaaaGTCGCTCTTTTTTTTTCTTCATCCTTGTTTTAATGGATTAAATTTTGCCCACTCGCGAGTGGCCTTTTTCTTTTCGGTCGGGCTTGTTTTT‑CCAGCCACCCCGCAAACGGTTCGGTATCAGCGGCTGCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  2:422025/237‑1 (MQ=255)
                           taaaaGACGCGCATTTGTTTTCATTGTCCCTGAATTCACAGATTAAATTTTGGCCCCCCCCTATGGGCCTTTTTCTTTCCTTGCAGGCGTGTTTTT‑CCAGCCCCACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  2:898341/237‑1 (MQ=255)
                           tGAAAGGCGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCGGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  1:120900/239‑1 (MQ=255)
                           tGAAAGCCGCGCATTTTTTATCATCAGCCCTGAATTCAGGGGTTAAATTTTGGCCGCTCACGATTGGCCTTTTTCTTTTCTGTCAGGCCTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  2:630058/239‑1 (MQ=255)
                           tGAAAGCCGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  1:315425/239‑1 (MQ=255)
                           tGAAAGACGCGCATTTGTTATCATCCTCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACCCCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  1:707358/239‑1 (MQ=255)
                           tGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  1:506297/239‑1 (MQ=255)
                           tGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCa                                                                                                                                                                                            <  1:246176/239‑1 (MQ=255)
                           tGAAAGACGCGCATTTGGTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGCCGGCGTTCAGACGCCTCGCGCTCGGCTACAAATTC‑CTTTTC‑CCGCCGAATTTCCAGCGGCTCTTCCCG‑CAGCC‑GGTTACGGTAAG‑CTTCtccc                                                                                                                                                                                            >  1:1211471/1‑236 (MQ=255)
                            taaaGACGCGCATTTTTTTCCATCACCCCGAAATTCAAGGGTGAAATTTTGGCCCCTCCCCGGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTCTCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCaa                                                                                                                                                                                           <  2:1094584/238‑1 (MQ=255)
                               aGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACg                                                                                                                                                                                                                        <  1:326660/210‑1 (MQ=255)
                                 aCGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCCCTTCACG‑CAACA‑GCTTAGCGTAGG‑CTTTTGCAAATG‑Ct                                                                                                                                                                                     >  1:724996/1‑239 (MQ=255)
                                 aCGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCCCGGCTCCAAAATC‑CTCTTC‑TCGCAGAATTTCCACCGGCCCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCaaaatct                                                                                                                                                                                      >  2:1371884/1‑235 (MQ=255)
                                   gcgcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTCCAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCCCTTCACG‑CAGCC‑GATTACGGTAGG‑CTTCTGCAAATG‑Cttt                                                                                                                                                                                   >  1:619289/1‑239 (MQ=255)
                                    cgcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCCCGGCTACAAAATC‑CCCTTC‑CCCCAGAATTTCCACCGCCCCTTCCCC‑CAGCC‑AATTCCGGTAGG‑CTTCtcaaaaaccttt                                                                                                                                                                                    >  2:516070/1‑227 (MQ=255)
                                     gcATTTGTTATCATCATCCTTGAATTCAAGGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGc                                                                                                                                                                                 <  1:445299/239‑1 (MQ=255)
                                               ccatcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑Gcc                                                                                                                                                                      <  1:918907/238‑1 (MQ=255)
                                                 atcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCGCGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGCCGTTCAGACGCCTCGCGCTCGGCTCCAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCCCTTCACG‑CATCA‑GATTACGTTAGG‑GCTCTGCAAAAG‑CTTTTCCTGTTTC‑GCCaa                                                                                                                                                                    >  2:226359/1‑239 (MQ=255)
                                                    ctcCCTGAATTCAGAGATGAAATTTTGGCCCCTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCT‑GCCAATAc                                                                                                                                                                 <  1:1316594/238‑1 (MQ=255)
                                                    cacccTTAATTCAGGGATTAAATTTTGGCCCCCCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATAc                                                                                                                                                                 <  1:1153461/237‑1 (MQ=255)
                                                      cccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑TCGCAGAATTTCCAGCGGCCCTTCACC‑CAGCA‑GATTACGGTAGG‑CTTTTGCAAATG‑CTTTCCCTTTTCC‑GCCCATAccc                                                                                                                                                               >  2:918907/1‑238 (MQ=255)
                                                      cccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCCCG‑CACCA‑GATTACGGTAGG‑CTTCTCAAAATG‑CTTTGCCTGTTCC‑GCCACAACCa                                                                                                                                                               >  2:1272851/1‑239 (MQ=255)
                                                      cccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGTTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑CCCAATACCa                                                                                                                                                               >  1:589049/1‑239 (MQ=255)
                                                      cccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTCTTGCAAAAG‑CTTTTCCTGTTCC‑GCCAATACCa                                                                                                                                                               >  1:103372/1‑239 (MQ=255)
                                                        ttGAATTCAGAGATGAAATTTTGCCCCCCTCCGAGGGGCCTTTTTCTTTTCTGTCAGGC‑TGTTTTTCCCAGCCACACCGCAAACGTTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGt                                                                                                                                                             <  2:1060047/238‑1 (MQ=255)
                                                          ttaTTCAGGGTTGAAATTTTGGCCCCTCACGGTTGGCCTTTTTCTTTTCTGTCGGGCGTTTTTTC‑CCAGCCACACCGCAACCGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTat                                                                                                                                                           <  2:350674/237‑1 (MQ=255)
                                                          taatttggggaTGAAATTTGGGCCACTCACGAGTGGCTTTTTTCTTTTTTGCAAGGCGTGTTTTC‑CCAGCCACACCGCAAGCGTTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGCCGCCTCGCGCTCGGCTAAAAAATC‑CTCTGC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTat                                                                                                                                                           <  2:408491/230‑1 (MQ=255)
                                                          gAATTCAGAGAGGAAATTTTGGCCACTCACGGGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTat                                                                                                                                                           <  1:516070/239‑1 (MQ=255)
                                                           aaTTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTttc                                                                                                                                                          >  1:1365304/1‑239 (MQ=255)
                                                                  agaTGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATa                                                                                                                                                   <  1:223970/239‑1 (MQ=255)
                                                                   gtggataTTTTGGCCACTCCGGTGTGGCTTTTTTTTTTTCTGTGAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCGGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATa                                                                                                                                                   <  2:812653/232‑1 (MQ=255)
                                                                    aggcaaTTTTGGCCACCCACGGTTGTCCTTTTTCTTTTCTCTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GTCAATACCAGTat                                                                                                                                                           <  2:200514/225‑1 (MQ=255)
                                                                    aTGAAATTTTGGCCCCTCACGAGTGGCCTTTTTCTTTTCGGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATa                                                                                                                                                   <  1:997796/237‑1 (MQ=255)
                                                                              ggCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAACATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GTCAATACCAGTATCAATCATAGa                                                                                                                                                 >  1:200514/1‑229 (MQ=255)
                                                                               gCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCACTAc                                                                                                                                                                 >  1:1364715/1‑212 (MQ=255)
                                                                                      ccttttgtctttttttttttttttTGGGCTTTTTTTT‑CCCGCCACCCCGCAAACGGTTCGGTACCCGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCaga                                                                                                                               <  2:630813/229‑1 (MQ=255)
                                                                                                 ttttcttttcTGTCAGGCTTGTTTTA‑CCCGCCCACCCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGAt                                                                                                                    <  1:282439/239‑1 (MQ=255)
                                                                                                  tttcttttctGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGACTTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGA‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACAAGTATCACTCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATc                                                                                                                   >  1:985806/1‑239 (MQ=255)
                                                                                                             tCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGAAACGGGCGGGGAAAATCAAATCGGGAtaaacaa                                                                                                        >  2:762053/1‑233 (MQ=255)
                                                                                                                ggCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTCTCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACg                                                                                                                                                                                                                        <  2:29977/129‑1 (MQ=255)
                                                                                                                ggCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACg                                                                                                                                                                                                                        >  1:29977/1‑129 (MQ=255)
                                                                                                                  ctttttttc‑CCCGCCCCCCCCCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGGTGACGGCGTTCAGGCGCCTCGCGCCCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAg                                                                                                   <  2:1171875/235‑1 (MQ=255)
                                                                                                                  cGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCACTACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAATTCAGATCGGGATTATCGacaccg                                                                                                   >  1:554294/1‑234 (MQ=255)
                                                                                                                      ttttt‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAATCAGGCaa                                                                                               >  1:35049/1‑239 (MQ=255)
                                                                                                                       tttt‑CCAGCCCACCCGCAAACGGTTCGGTATCAGCGGCTTCCCTTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAAc                                                                                              <  1:1371884/239‑1 (MQ=255)
                                                                                                                            ccAGCCCCCCCCCAACCGTTTCGGTTGCCGCGGCTTCCATTGCCGGTTGACGGCCTCAAGCAGCCTCGCGCTGGGCATCAAAATC‑CTCTTC‑GCCCAGAATTTCCAGCGGCCCTTCACG‑CAGCA‑GATTCCGGTAGG‑CTACTGCAAATG‑CTTTGCCGGTGCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGt                                                                                          <  2:766902/239‑1 (MQ=255)
                                                                                                                                   cacCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATCGa                                                                                                                                                 >  1:359030/1‑177 (MQ=255)
                                                                                                                                    cccGCAAACGGTTCGGTTTCGCCGGTTTCCTTTCCCTGCTGCCGGCGTTCAGACCCCTCCCGCTCGGCTACAAAATC‑CCCTTC‑GGCCCGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTCCGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcaca                                                                                  <  2:35049/238‑1 (MQ=255)
                                                                                                                                    cccGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcaca                                                                                  <  1:78664/238‑1 (MQ=255)
                                                                                                                                    acCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcaca                                                                                  >  1:20754/1‑239 (MQ=255)
                                                                                                                                    acCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcaca                                                                                  <  1:285471/239‑1 (MQ=255)
                                                                                                                                    acCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCCAAGCAGGCAACCAGTTCATcac                                                                                   >  1:958154/1‑238 (MQ=255)
                                                                                                                                      cggaaaCGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcacaca                                                                                <  1:226359/236‑1 (MQ=255)
                                                                                                                                        cAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑t                                                                             <  1:1055217/239‑1 (MQ=255)
                                                                                                                                        cAAACGCTTCGTTATCCGCTCCTTCCATTTCCTGCTGACGGCGTTCAGTCGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCCCAAAATTTCCAGCGGCTCTTACCG‑CCGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑t                                                                             <  2:619289/239‑1 (MQ=255)
                                                                                                                                               ttCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGa                                                                       <  1:1085213/238‑1 (MQ=255)
                                                                                                                                                tCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGGGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATAACCAAC‑CTTCTGaa                                                                      >  2:8001/1‑237 (MQ=255)
                                                                                                                                                tCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGCAGCAGGCAACCAGTTCATCACACAC‑TTTCTGAt                                                                      >  1:194813/1‑238 (MQ=255)
                                                                                                                                                         ggtgtttCCTTTTCCTGCGGAGGGGTTTCACGC‑CCCCGCGCTCGGGTTAAAAATC‑CCCCTCTGCCGAAAATTTCAGGGGGCCTTTCCAG‑CGGCA‑GATTAGGTTGTG‑TTTCTGAAATGG‑TTTTCCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTAAAGATCCGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACCC‑TTTCTGATACGCTTcgcc                                                            <  2:103372/234‑1 (MQ=255)
                                                                                                                                                           ggCTTCCATTTCCTGCTGCCGGCGTTCAGACCCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCCCAGAATTCCCAGCGGCCCTTCCCG‑CAGCA‑GATTACGGTAGG‑CTTCGGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTcgcc                                                            <  1:762053/237‑1 (MQ=255)
                                                                                                                                                              ttCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGACGCCAGCAACCAGCTCATCACACAA‑TTTCTTATACGCTTCGCCGCCGt                                                       >  2:1367796/1‑239 (MQ=255)
                                                                                                                                                              ttCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGt                                                       <  1:8001/239‑1 (MQ=255)
                                                                                                                                                              ttCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCCAAGCAGGCAACCAGTTCACAAAAAAC‑TTTATGAAACGCTCCTcccccgg                                                       >  2:627979/1‑238 (MQ=255)
                                                                                                                                                              ttCCATTCCCTGCTGACGGCGTTCAGCCGCCTCGCGCTCGGCTAAAAAATC‑CTCTCC‑GGGCAGAATTTCCAGCGGCTCTTAACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGt                                                       <  1:1272851/239‑1 (MQ=255)
                                                                                                                                                                          ctgACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCAACCAC‑TTTCTGGTACGCTTTGCCCCCGTTAATCCTAAcc                                            >  1:1141357/1‑238 (MQ=255)
                                                                                                                                                                            gACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGACGCAGGCAACCAGTTCATCACACAC‑TTTCTGATCCGCTTCGCCGCCGTTACTACTATCCa                                           >  1:588967/1‑237 (MQ=255)
                                                                                                                                                                                    tCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTatc                                                                                                                                                          >  2:91873/1‑119 (MQ=255)
                                                                                                                                                                                    tCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTatc                                                                                                                                                          <  1:91873/119‑1 (MQ=255)
                                                                                                                                                                                    tCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCAAACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTgcg                                  >  1:889996/1‑238 (MQ=255)
                                                                                                                                                                                           ccTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGTTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcaca                                                                                  <  2:731162/184‑1 (MQ=255)
                                                                                                                                                                                           ccTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATcaca                                                                                  >  1:731162/1‑184 (MQ=255)
                                                                                                                                                                                                    cgccTACAAAACC‑CTCTTC‑GCGCAGATTTTCCAGGGGCT‑TTCCCGCCACGA‑TATTACGGTGGG‑TTTCGGAAAATG‑TTTTGCTTGTTCC‑GCCAATCCCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATcg                 <  2:589049/236‑1 (MQ=255)
                                                                                                                                                                                                    ccgctcaaaaaTC‑CTTTCC‑CCGCAAAATTTCCAGCGCCCCTCCACC‑CACAA‑GATTACGGAGGG‑CTT‑TACAAAAGTCTTTGCCTGTCCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATcg                 <  2:699716/232‑1 (MQ=255)
                                                                                                                                                                                                      gCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGGTTCAGATcgcg               >  1:699716/1‑239 (MQ=255)
                                                                                                                                                                                                      gCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACAATCCAGCGTTTGCCCGACCCGTTTCAAACcgcg               >  2:145957/1‑239 (MQ=255)
                                                                                                                                                                                                         aCAAACTC‑CTCTTC‑GCGCAAAATTTCCAGCGGCTCTTCCCG‑CAGCA‑GATTAAGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGCCCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACCC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATCGCGGaa            <  1:350270/239‑1 (MQ=255)
                                                                                                                                                                                                          cAAAATCTCTCTTC‑GC‑CAAAATTTCACACCTCCCTTCACG‑CAGCATGATT‑CGGTAGGTTTTCTG‑AGATT‑GTTTGTCCGTTCCAGCCAATCCCAGAAACATATATAGACCTAGAGGAACGGGCAAGGAAAGTCGGATCGGATTTATCGAAGCGGGAACCCAGTTCAGCACCCTCAGATGTG‑TAGACTACGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAAATCGCGGaa            <  2:1092961/239‑1 (MQ=255)
                                                                                                                                                                                                           aaaaCC‑CTCTTG‑GGGAAAAATTTCCAGGGGCTTTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑TTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGCCCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATCGCGGAACa          <  1:145957/239‑1 (MQ=255)
                                                                                                                                                                                                              aTC‑CTCTTC‑GCGCAGAATTTCCACCGGCTCTGCACG‑CAGAA‑GATTCCGTGAGG‑ATTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGTTCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATCCGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATCGCGGAACAGAt       <  1:1352860/239‑1 (MQ=255)
                                                                                                                                                                                                               tC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGtt                                                                                                                                                                            >  1:274928/1‑75 (MQ=255)
                                                                                                                                                                                                               tC‑CTCTTC‑GCGCAGAATTTCCAGCGGCGCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGtt                                                                                                                                                                            <  2:274928/75‑1 (MQ=255)
                                                                                                                                                                                                                  ctctTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATa                                                                                                                                                   >  2:9351/1‑97 (MQ=255)
                                                                                                                                                                                                                  ctctTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATa                                                                                                                                                   <  1:9351/97‑1 (MQ=255)
                                                                                                                                                                                                                     ttC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATCTTATCCAGCGCTTGCGCGACGCGGTTCAGACCCCGGAACAGATCTTTa  >  1:1241237/1‑238 (MQ=255)
                                                                                                                                                                                                                     tctgcccaaaaaTTTCCAGCGGCCTTTCCGG‑CAGAA‑GTTTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACCC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATCGCGGAACAGATCTTTa  <  1:1063489/229‑1 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                             
CTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTT‑CCAGCCACACCGCAAACGGTTCGGTATCAGCGGCTTCCATTTCCTGCTGACGGCGTTCAGACGCCTCGCGCTCGGCTACAAAATC‑CTCTTC‑GCGCAGAATTTCCAGCGGCTCTTCACG‑CAGCA‑GATTACGGTAGG‑CTTCTGCAAATG‑CTTTGCCTGTTCC‑GCCAATACCAGTATCAATCATAGACCTTAAGATACGGGCAGAGAAAGTCAGATCGGGATTATCGAAGCAGGCAACCAGTTCATCACACAC‑TTTCTGATACGCTTCGCCGCCGTTAATACTATCCAGCGTTTGCGCGACGCGTTTCAGATCGCGGAACAGATCTTTA  >  NC_000913/2814774‑2815222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑