Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	522892	523344	453	19 [18]	[15] 21	[rhsD]	[rhsD]

TGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTA‑TTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGA  >  NC_000913/523133‑523583                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   tgttgttgATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTATTTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTGCCCATT‑TCCACGGGTCGGCAGGGGTAAGCATTTGG‑GCGCCCCCCGCCGGGGGCGTGcc                                                                                                                                                                                                                          >  1:853124/1‑238 (MQ=255)                                                     gCTGGTCTTGTGTGTCATTTTA‑TTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCc‑gggcggg                                                                                                                                                                                                        <  1:435306/202‑1 (MQ=255)                                                               tgtgtCATTTTA‑TTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAAATGGC‑GCGCCCACCCGC‑GTGGCGGGGTCGGGGTGTGC‑GGGGGGGGTGACTTCGGGCAAACCCGGAAAACCGCTGCTGGGGGCgcgggg                                                                                                                                                            >  1:847203/1‑231 (MQ=255)                                                                      tttta‑ttttTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGgc                                                                                                                                                                                                                                                  <  1:13083/146‑1 (MQ=255)                                                                                                        gAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCAATGTCCCGGGGGCGGGCGGCGTAAGAATTGGC‑GGGCCCCCCCGC‑GTGGGCGGCCCGGGGTGGTC‑CGGCGGGGGGAGTGCGGGGACACCGGGAACAACGCTGTGTGGGGGGGAGGGGCGGCCCAGG‑GGGACGGGCCCTGCGCGgcccgggccccgcccg                                                                                                                >  2:1020433/1‑232 (MQ=255)                                                                                                                       gacagcTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTccc                                                                                                   <  1:93333/232‑1 (MQ=255)                                                                                                                                       cGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCCTTGTCCAGGGGTCGGCAGGTGGAAGAATTGGCGGCGCCC‑CCCGC‑GGGGGGGGGTCGGGGGGGCCGGGGGGGGAGGCCTCCGGGAACCCCGGGAAAACCCCTGCT‑GGGGCGGGGGGGGGGGCCGGCGGAGAGGGGCCTCGCGCGCCCCGCCCCGCGGCCGGTCTTTCTCCCCCCCCCCcacaccccgcc                                                                                   >  2:93333/1‑231 (MQ=255)                                                                                                                                              ccAGGGGCTCGTCAGGGGGATATGCCACAGGATGGCGGT‑TCCATTGGTCAGGGTTCGGCTGTTGTAAGAATTGGC‑GCGCCCACCGGC‑GGGGCGTGCGCGGTGTGGCC‑GGGCGGGATGCCTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTTCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCACTCCCGCACCTACAGCAGCTACCGGACGaa                                                                          <  2:724733/239‑1 (MQ=255)                                                                                                                                                 gcggcgCGTTAGGGAGATATGACTCAGGATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGAc                                                                       <  1:962832/239‑1 (MQ=255)                                                                                                                                                                            tATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCgctgct                                                                                                                                                                        <  1:572158/116‑1 (MQ=255)                                                                                                                                                                             aTGGGGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGc                                              <  1:807653/236‑1 (MQ=255)                                                                                                                                                                                        cATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAg                                 <  1:73491/239‑1 (MQ=255)                                                                                                                                                                                        cATTGGCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAg                                 <  1:638660/239‑1 (MQ=255)                                                                                                                                                                                               cAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGAGGAAGACGCCTGCCCCGGTGGGCGTTTTCGGCCCCGGCTGGCAACCGCCt                            >  1:278176/1‑237 (MQ=255)                                                                                                                                                                                                                    aTTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAACCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACg     <  1:344949/239‑1 (MQ=255)                                                                                                                                                                                                                       ggC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GCGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCCCCCACAGCAGCTACCGGACGAAGACGCCTGCACCCGTGGGCGTTTTCGGCCCCGGCTGGAACGCGCCCTCTGTATTCCGCTTAccaccccgggg  >  2:731001/1‑229 (MQ=25)                                                                                                                                                                                                                       ggC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGCCGGACCTTGCGCTGCCCGGCCCGCTCCCGTTCAGTCTCTCCCCCACCTACAGCAGCTACCGGACGAAACCGCCCGCACCCGCGGGCGCGTTCGGCCCCGCCTGGCAAACCCCTTCCGATATCCCCTTACACCtcacgaa  >  2:1081288/1‑233 (MQ=255)                                                                                                                                                                                                                       ggC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGtga  >  1:808722/1‑239 (MQ=255)                                                                                                                                                                                                                       ggC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCCGTGGGCGTTTTCGGCCCCGGCTGGAAAGGGCCCTCTGCAATCCCCTTACAGCTACgggg  >  2:954961/1‑236 (MQ=255)                                                                                                                                                                                                                       ggC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACAAAGACGCCTGCCCCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGGGCCTTCTGATATCCGCTTACAGCTACGtga  >  1:932439/1‑239 (MQ=255)                                                                                                                                                                                                                       ggC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCCACCGGACGCAGACGCCTGACCCGGGGGGCGTTTTCCGCCCCGGCCGGGAAGGCCCTTCTGAAATCCCGCTACAGCtcccggg  >  2:209860/1‑233 (MQ=25)                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   TGTTGTTGATTGAGAACAAATAAGTTTATGTGAAAAATATATAAATACATTAGCTGGTCTTGTGTGTCATTTTA‑TTTTTTTTTGTTGCTAACACAGGGATATGAACAATAACTAAAAGGGCACTTTATATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGT‑CCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGC‑GCGCCCACCGGC‑GTGGCGTGCTCGGTGTGTCC‑GGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGC‑GAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGA  >  NC_000913/523133‑523583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑