| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,479,972 | G→C | 18.7% | G212G (GGC→GGG) | kefB ← | potassium:proton antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,479,972 | 0 | G | C | 18.7% | 132.2 / 2.3 | 66 | G212G (GGC→GGG) | kefB | potassium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base G (24/28); new base C (11/3); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.82e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGC > NC_000913/3479739‑3480203 | tGGGTTTAACACCCCCCGGGGTTGAGTGACTGAGCGAAAGAAAAAAAGAACAAACCGAGCAAGCAGCTTTTGAAGGGATCGATGGCCGTTTCCAGTTCAGGGCGATTTTCACTTCCCGCCAACAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑Ga < 2:28212/239‑1 (MQ=255) ggTAAAAAGCCCCCCGGGGTTGAGTGACATGCCGACAGAAATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑Ga < 2:30712/237‑1 (MQ=255) taAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCACCAGCCGCGTCG‑CGCCGGTGAACACTTCCCGCAccccctaacaccc > 1:432658/1‑230 (MQ=255) aaGCCCCCGGAGGTGAAGTACCAGGCCGACAGAGAAAAAAAACAACCCGGGCAGCAAGCCTTGAGAGGGGTCGATGGCCTTTTCCATTTCATGGCGAAAATCACTTTCCGCCAGCAGGACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCaa < 2:161407/239‑1 (MQ=255) aCCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATa < 1:259937/237‑1 (MQ=255) ccccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGACCACTTCCCGCCACCCC‑GAAGCC‑GCAATaaac > 1:1067744/1‑238 (MQ=255) ccccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACCCCA‑GAAGCT‑GCAATAAAg > 1:883915/1‑239 (MQ=255) cccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATTCGGAACCCACCACCAGCAGCAGCGTCG‑CGGCGGGGAACCATTCCCGCACCCCC‑AAACCG‑CCAATAAAGc > 1:88910/1‑239 (MQ=255) cccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGc > 1:59419/1‑239 (MQ=255) cccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGGGAACAATTCCCGCCCCCCA‑GAAGCT‑GCAAAAAAGc > 1:969105/1‑239 (MQ=255) cccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGGGAAAACTTCCCTCACGCCC‑CAAACT‑GCAAGaaaac > 1:719150/1‑237 (MQ=255) cccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGGTTCCAGTTCATGGCGATTTTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCC‑CGGCGGTGAACACTTCCCGCACGCCC‑GAAACT‑TCAATAAAGc > 1:400487/1‑239 (MQ=255) ccGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCg < 1:571175/239‑1 (MQ=255) cggggTTGAGTGACATGCCGACAGAAAAAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCgg < 2:301928/236‑1 (MQ=255) cGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCACCACCAGCACCAGCGCCC‑CGCCGGTGAAACCTTTCCCGACCCCC‑GCAACT‑GCAAAAAAGCgg > 1:543014/1‑239 (MQ=255) cGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCACAACCAGAACCACCGCCC‑CCGCGGGGAACACCCCCCCCCCCCCA‑AAAACG‑GCaaaaaaaggg > 2:1010906/1‑235 (MQ=255) aGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑CGGCGGTGAAAACATCCCCCCCCCCC‑GAAGCTCGCAA‑AAAACAGAAAACCgg > 2:843709/1‑239 (MQ=255) aGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACCCCA‑AAAGCT‑GCAAAAAAACGGAAAACCgg > 1:877044/1‑239 (MQ=255) tactggCCGACAGAGATAAAGAATAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCCTCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGAc < 2:357181/233‑1 (MQ=255) gaaattcccaCAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGAc < 1:549828/229‑1 (MQ=255) gACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCCCTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACg < 1:1010906/239‑1 (MQ=255) aaaTAAAAAACAAACCGAGCAGCAAGCCTTTGAAGGGAACGATGGCCTTTTCCAGTTCATGGCGATAGTCCCTTCCCGCCAGCAGCACGCCCGCAATAAATG‑ACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATCCCGGACGCAGTAAATAGCGcc < 2:598325/237‑1 (MQ=255) tAAAGAACAACCGCATCAGCAAGCCTTTGAAGGGATCGGTGGGCGTTTCCGGTTCAAGGAGATTTTCACTTTCCGCCAGCATCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCCTCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGTGcc < 2:729643/237‑1 (MQ=255) aaaGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACCCCC‑GAAGCT‑GCACTAAAGCGGAATACCGGACGCAGTAAATCGCCCccac > 1:380408/1‑239 (MQ=255) aaCCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑Ga < 2:471350/187‑1 (MQ=255) aaCCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCCCACGCCC‑CAAACG‑GCAATAAACCGGAATACCGGAACCCGTAAAAAACGCccacccaccacc > 1:1027823/1‑232 (MQ=255) aaCCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACAATTCCCGCACGCCA‑Ga > 1:471350/1‑187 (MQ=255) aaCCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CCGCGGTGAAAACTTCCCGCACCCCC‑GAAGCT‑GCAATAAAACGGAATACCGGACGCACTAAATAGCGCccaccacccacc > 1:296231/1‑233 (MQ=255) gTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCCCCCCA‑GAAGCT‑GCAATAAAACGGGATACCGGACGCAGTAAATAGCCCCCCCCCATCACCAAGCCCCCAAACCCCCGCCCCCCCATGCCGccccc > 2:783796/1‑237 (MQ=255) tCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCTAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAAAACCGGACGCAGGAAATAGCGCCCACCAATCAGCATGCCTGCAAACGCCAGCACCTTCATGCCGACCTTCa > 1:18259/1‑238 (MQ=255) aTGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCCTGCCGACCTTCCTCCCGTCGa > 1:545598/1‑239 (MQ=255) tatatTCCTTTTCCGCCAGCAGCCCGCCCCCAAAAAATGTCCCGCGCGCCAGCGACAGCCCCAGCGGATCCATAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATg < 2:59419/237‑1 (MQ=255) gATATTCCCTTTCCGCCAGCAGCCCGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATg < 1:356444/238‑1 (MQ=255) aaagtcccGGGCGCCATCGACCGCCCCAGCGCATCCAAAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGc < 1:755734/233‑1 (MQ=255) aaTGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGc < 1:287102/239‑1 (MQ=255) ccGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCCGCACCTTCATGCCGACCTTCATCCAGTCGCAATGTTCGTCTGCCGACCCCGCC‑AA‑AACCGCGCAT‑AACGCCAggg > 1:700733/1‑236 (MQ=255) ccGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCCCC‑AACAAAGGCAC‑T‑AACGcccaggc > 1:173533/1‑234 (MQ=255) ccGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGGAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAATCGAAAAGTTGGTCTTCCGCCCCCGCC‑ACCAACGGCCC‑T‑AAAGcccgggc > 1:745318/1‑234 (MQ=255) cGAGCGCCATCGACAGCCCCAGGGCATCCAAAAACAATGCGGAACCCAACCCCAGCAGCAGCTTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGCCCTTCATCCAGCCGAAATGTTCGGCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCt < 1:708840/239‑1 (MQ=255) gAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAACATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGATCGTCTTCCGACCCCGCC‑AACAACCGCAC‑T‑CACGCCAgcactg > 1:713425/1‑234 (MQ=255) ccatgcgaaGCCCCAGGCCATCCCAAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑CGGCGGTGAACCCTTCCCGAACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGAt < 1:756628/230‑1 (MQ=255) cagcGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTa < 1:843709/236‑1 (MQ=255) cATCGACAGCCCCAGCGCATCCATAAACAAGGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACCCTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTa < 1:259120/239‑1 (MQ=255) cccccccCGCCCAACCACAAAAAAAGCGGAACCCACCCACAGCAGCTGC‑TCGCCGGCGGGGACACCTTCCCACCCCCCA‑GAACCT‑GCAAAAAAGCGGAATACCGGACGCAGGAAAAAGCGCCCACCAATCAGCATGCCGCCAAACGCCAACACCTTCAGGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGCCCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCa < 2:691583/236‑1 (MQ=255) aGCCCCAGGGCAACCATAAACAATGCGGAACCAAACACCAGCAGCAGCGTCG‑CGGCAGTGAACACTTCCCGCACGGCA‑AAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCCCCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCAGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCa < 1:172884/238‑1 (MQ=255) cccAGGGCATCCAAAAACAATGCGGAACCCAACCACAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCa < 1:1025537/235‑1 (MQ=255) aGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAAAAGCGCCCCCCAATCAACATGCCGACAAACGCCAGCCCCTTCATGCCGACCCTCCTCCACTCGAAAACGTCGTCTCCCGACCCCCCC‑CCCAACCGCAC‑T‑AACCCCCATGCG‑GGGGTTACTggccggaccgg > 2:1084295/1‑229 (MQ=255) gcgcATCAATAAACAATGCGGAACCCAACCCCAGCAGCAGCGTCG‑GTGCGGTGAACACTTCCCGCACGCCA‑GAAGCG‑GCAATAAAGCGGAATCCCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGa < 1:209072/239‑1 (MQ=255) tGCGGAACCCAACACCAGCAGCGGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCa < 1:864806/197‑1 (MQ=255) tGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCC‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCCGTAAATAGCGCCCACCAATCAGCATGCCGGCAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGCCTGCCCACCCCCCCGCAAACCGCCAC‑T‑‑ACGCCCGCGGTGGGGATTAC‑G‑CCAGTGCCGGAAACAACAGAACCaaaa > 2:78303/1‑239 (MQ=255) tGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCCC‑T‑AACGCCCGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGaaa > 1:264428/1‑239 (MQ=255) tGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCCATGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGaaa > 1:969893/1‑239 (MQ=255) tGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAACGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGACC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCCGAACCGaaa > 1:252215/1‑239 (MQ=255) tGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACCTCCCGCTCGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCCCCCACCAATCAGCATGCCGACAAACACCACCACCTTCATGCCACCCCTCCCCCAGTCGAAATGTTCCGCTTCCGCCCCCGCC‑CAAAAACGCAC‑T‑CAACCCCCTGCT‑CGGGTTAATC‑CCCAATCCTGAAACACCAGAAccccaa > 2:197936/1‑235 (MQ=255) aaCACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAACGCGGGATACCGGACGCAGTAAATAACGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCCTCCTCCCGGCAGAATGTTCGTCTGACGCCCCCCCC‑CCCAACCGCCC‑T‑AACCCCAGTGCT‑GGGag > 2:864806/1‑196 (MQ=255) cagcagcagCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGCAAACGCAGAACCGAAAACCCGCACTGGccca > 2:754795/1‑237 (MQ=255) cagcagcGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACACCGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCCAATCCTGAAACAGCACAACCGCAAACCCGAGCGGGCCgagt > 1:593523/1‑235 (MQ=255) cagcagcGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCCC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCCGATCCTGAAACAGCAGAACCGCAAACCCCGGCTGGCCGGAt > 1:672520/1‑238 (MQ=255) cg‑cgGCGGTAACCCCTTCCCGACCGCAA‑GAAGCT‑GCAATAAAGCGGAATGCCGGTCGCAGTAAATAGCTCCCGCCAATCAGCATGCCGACAAACGCCAGCCCCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGGCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGAt < 1:78303/239‑1 (MQ=255) gcggTG‑ACACTCTCCCCCCGCCACGAAGCT‑GCAATAAAGGGGAATCCCGGCAGCAGTAAATGCCGCCCCCCCATCAGCATGCCGACAACCGCCAGCACCTTCATGCCGACCTTACTCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAACCAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCa < 2:500842/238‑1 (MQ=255) aaCACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGGATACCGGACGCAGTAAATAGCGCCCACCAATCAGCAAGCCGACAAACGCCAGCACCTTCATGCCGACCTTCCTCCAGTCGCAATGGTCGTCTGCCGGACCCCCC‑CACAACGGCCC‑TAAACCCCAGT‑CT‑GGGGTTACTGCCCACACCCGGAAA‑AACAGAACCGGAAACCCCACCCGGCCCGACTCCCCCCGAATCAAcccct > 2:340342/1‑236 (MQ=255) ctccccGCCCCCCT‑GAAGTT‑TCAATAAAGCGGAATCCTGGACGGATTAAATTGCGCCCCCCAACCAGCCCGCCGAAAAACGCCAGCGACTTCAGGCCCACCTCCATCCAGTGGAAATGTGCGTCTGCGGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGACCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCa < 2:380408/236‑1 (MQ=255) ttCCCGCCCCCCG‑GAAGCT‑CCAAAAAAGCGGAAACCCGGACGACATAAATGGCGCCCACCAATCAGCATGCCGACAATCGCCAGCCCCTCCATGCCGACCTTACACCATGCGAAATGTTGGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCAc < 2:252215/239‑1 (MQ=255) ttCCCGCAAGCCG‑AAAGCT‑CCAAAAAAGCGGAATCCCGGACCCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTCCATGCCGCCCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCAc < 1:877857/239‑1 (MQ=255) ccccGCACGCCA‑GAATGC‑GCAAGAAAGCGGAATACCGGACGCAGTAAATCGCGCCCACCAATCCGCATGCCGACAAACGCCAGCCCCTGCATGCCGACCTTCATACAGTCGAAGTGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACg < 2:88910/238‑1 (MQ=255) cccGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTCCGATTCATCCCttttcccccc > 2:89924/1‑232 (MQ=255) cccGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCAACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCCC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCCGAACCGAAAACCCCAGCTGGCCGGATTCCCCCCGATTAATCCCTTTCTCAct > 2:411344/1‑237 (MQ=255) | TGGGTATAAAGCACCCCGAGGTTGAGTGACATGCCGACAGAGATAAAGAACAAACCGAGCAGCAAGCCTTTGAAGGGATCGATAGCCGTTTCCAGTTCATGGCGATATTCACTTTCCGCCAGCAGCACGCCCGCAATAAATGTACCGAGCGCCATCGACAGCCCCAGCGCATCCATAAACAATGCGGAACCCAACACCAGCAGCAGCGTCG‑CGGCGGTGAACACTTCCCGCACGCCA‑GAAGCT‑GCAATAAAGCGGAATACCGGACGCAGTAAATAGCGCCCACCAATCAGCATGCCGACAAACGCCAGCACCTTCATGCCGACCTTCATCCAGTCGAAATGTTCGTCTGCCGACCCCGCC‑AACAACGGCAC‑T‑AACGCCAGTGCT‑GGGATTACTG‑CCAGATCCTGAAACAGCAGAACCGAAAACCCGAGCTGGCCGGATTCGCTGCGATTCATCCCTTTCTCACGC > NC_000913/3479739‑3480203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |