| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,701,625 | A→G | 14.9% | G223G (GGA→GGG) | malY → | PLP‑dependent beta‑cystathionase and maltose regulon regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,701,625 | 0 | A | G | 14.9% | 153.2 / 2.3 | 70 | G223G (GGA→GGG) | malY | PLP‑dependent beta‑cystathionase and maltose regulon regulator |
| Reads supporting (aligned to +/- strand): ref base A (20/37); new base G (8/4); total (29/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.63e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGGTTGGTTTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAACCTGACGTATA > NC_000913/1701390‑1701860 | aTGGTTGGTTTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGgaga < 2:664598/238‑1 (MQ=255) tggttTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑Tggg < 1:680740/238‑1 (MQ=255) ggttTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCTAGCACCCGCATATTCCCTGGAGTAAGGGGGCTCGCGGGGAcccggtg > 2:229295/1‑233 (MQ=255) ggttTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAAATCATGGCTGACCTGTGCGAGCGTCATGGGGTGCGGGTATTTTCCGTGG‑AAATCCATATGGGAATGGTTTGGGGCGAGCAGCCCCCTATTCCCTGGGGCAATGGGGGCCCCGGGGAA‑Tggggg > 2:265234/1‑237 (MQ=255) tatGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATGATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGt < 1:277036/239‑1 (MQ=255) tGGGCAAGTTGGAAGCCGGTTTGGGGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCg < 2:480511/239‑1 (MQ=255) ttGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGGGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGaa > 1:590841/1‑239 (MQ=255) ttGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGGGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGGGAC‑TGGGCGTTGTTAAAGTCGGGGTCGaa > 1:1045053/1‑239 (MQ=255) ttGAAAGGCGTTTTGGGGAACCCAGATGTTAAAATTATGCCCCTTGGGAGCCCACAGAATCCTGCCGGGAAAGGTGGGACGTGCGATGAGCTGGAGATCATGGCTGGCCTGTGCGAGCGTCATGGTGTGCGGGTTATTTTCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGaa < 2:193186/239‑1 (MQ=255) tGGAAGCCGTGTTGGCAAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCTGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGaa < 1:820095/238‑1 (MQ=255) gtgtTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGGTGCTAACGTCGGGCTCGAAAAGTTT‑C‑aa > 1:633310/1‑239 (MQ=255) tgtTGGCGAAACCAGAGTGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCCTATTCCCTGGAGTAATGTGGTTCGCGG‑GACATGGGGGTTGCTAACGCCGGGCCCGAAAAGTTT‑C‑aaa > 1:798454/1‑238 (MQ=255) agggaaaaTTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCg < 1:195524/235‑1 (MQ=255) aTGTAAAATTATGCCCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGGGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATA‑GGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCgg < 1:640340/239‑1 (MQ=255) gttaaaTTTTTCTCCTGTGGTGCCCACAGAAGCCGACCGGGAAGGTGTGGACGTTCGATGAGCTGGAGATCATGGCTGACCTGTGGGAGCGTCATGGTGTGGGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGt < 2:590841/236‑1 (MQ=255) ttttttcTCCTGGTTGGCCCCAAGAAGCCTACGGGGAAAGGTTGGAGGGTGGATGGGCTGGAGTTCATGGCTGACCTGGGCGGGGGTTATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTa < 2:1072670/233‑1 (MQ=255) aTTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGGGATGAGCTGGAGATCATGGCTGACCTGTGCGGGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTa < 1:630805/239‑1 (MQ=255) aTTATGCGCCTGTGTAGCCCACAGAATCCTAACGGGAAAGTGGGGACGTTCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTa < 1:1018810/239‑1 (MQ=255) aTTAGGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCCTGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGTCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTa < 1:709727/239‑1 (MQ=255) tATGCTCCTGTGTAGCCCACAGAATCCTTCCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGGGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGGGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑aa < 1:837618/213‑1 (MQ=255) tGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATTTGGCTCGCGGGGAC‑TGGGGGTTGCGAACGTCGGGCTCGAAAAGTTT‑CAAATATTCCC‑CCCTGACCGGGGCTTACggg > 1:41135/1‑239 (MQ=255) gCTCCTGTGTAGCCCAAAGAATCCTACCGGGAAAGGGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGGGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGa < 1:1011401/239‑1 (MQ=255) cTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGGGCTTACGGGAtttt > 1:206230/1‑237 (MQ=255) ccccaaGACTCCTCCCGGGAAGGTGTGTGCTGGGGATGGGCGGGAAGTCATGGTTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAAt < 2:1045053/233‑1 (MQ=255) cacaGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGGCGGGCTCGAAAAGGTT‑T‑AATATTCCCGCCCTGACCGGGGCTTACGGGGTTTTTGAAAATaac > 1:280612/1‑237 (MQ=255) caGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGGGCTTACGGGATTATAGAAAAAAGCat > 1:893545/1‑238 (MQ=255) aGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGCGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGAGTATAGAAAATAGCAGt > 1:886076/1‑239 (MQ=255) cattCCGACCGGGACAGTGGGGGAGTGGGATGGTGTGGAGAGCATGGCTCACCTGGGCGAGCGGCATGGTGTGCGGGTTATGTCGGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATGCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGTGTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTa < 2:1005739/236‑1 (MQ=255) aaTCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCTTATTCCCTGGAGTAATGTTGCTCTCGTGGAC‑TCGGCTGTGCTAACCCCGGGCTCGCAAAGTTTCC‑AATA‑TCCCCCCCTCCCCGGTGCTTCCGGGGTTTAAGaaaaaaaccaca > 2:329745/1‑230 (MQ=255) aaTCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑AGGGCGTTGCTACCGTCGGGCTCGCAAAGTTT‑C‑AATATTTCCGCCCTTCCCGGGGTTTCCGGGAGTATAGAAAATAGcgctt > 1:687017/1‑234 (MQ=255) ccTTCCGGGAAAGTGGGGAGGTGGGATGGGCTGGAGATCATGGCTGACCTGTGCGGGGGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTGGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCcg < 2:280612/239‑1 (MQ=255) tACCGGGAAAGGGGGGACGTGCGATGAGCGGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTGTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCcgcg < 1:759065/239‑1 (MQ=255) tccGGGAAATTTTGGACGTGTGTTGGGCTGGAGATTGTGGCTGCCCTGTGCGAGTGGCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGa < 2:348628/238‑1 (MQ=255) ccGGGAAAGTGTTGGGGGGCGATGAGCTGGAGATCATGGGTTACCTGTGCGAGGGTCATGGTGTGGGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGAt < 2:893545/239‑1 (MQ=255) cGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGGGAC‑TGGGCGTTGCTCACGTCGGGCCCGCAAAGGTT‑C‑ACAATTTCCGCCCCGCCCGGGGCTTCCGGGGTTATAGAAAAAAGCAGAAGCCGCCGCGCCGACTTATCCGCAcctg > 2:60505/1‑236 (MQ=255) cGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGAc < 1:988684/180‑1 (MQ=255) cGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGCCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGAc > 2:988684/1‑180 (MQ=255) tGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTGGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATtata < 1:340599/196‑1 (MQ=255) ggggggtgtGGCTGTCCTGGGGGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGAGATGGTTTGGGGCGAGCAGCCGAATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTg < 2:1053715/231‑1 (MQ=255) ccgtgggtcccTGGGCGGGTGTCATGGTTGGGGGGTTCTTTCCAATG‑AAATCACTGTGGGTAGGGGTTGGGTGGAGCAGCCGCATATTCCCTGGAGTAAGGTGGCTCGGGGGGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATAGTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATggg < 2:614768/229‑1 (MQ=255) tGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTTTAGAAAATACCAGTAGCCCCGGTGCCTATTTTTCGGCCCTGAAAGGCCGTGATTGG‑Ctt > 1:956913/1‑239 (MQ=255) aCCTGTGCGATCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGGTTTTAGAAAATACACATAACCACCAGGCCCATTTTTAGGGACTGAAAAGCAGAGATGGG‑CGtttttc > 2:937489/1‑238 (MQ=255) ccTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGt < 1:161829/160‑1 (MQ=255) tgCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGGGAC‑TGGGCGATGCCAACCTCGGGGTCGGAAAGTTT‑C‑AATATTCCCGCCCTGACAGGTACGTACGGGGTTCTAGAAAAAAAAAGTAACCCCGATGCCCTTTTTTCGGCACGTAAAAGCCGTGGTGGGAGTTTTTTCCCCtc > 2:1053893/1‑238 (MQ=255) tgCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAACCCCGATGCCTATTTTTCGGCACTTAAAAGCCGTGATGGG‑CTTTTTTCCCCTTc > 1:374486/1‑239 (MQ=255) gtgGGGGTTTTTTCC‑ATGAAAATCCTTATGGTTTTGGGTTGGGGGGAGCATGCGAATATTCCCTTGAGTAATGTGGCGCGCGTGGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTaa < 2:798454/238‑1 (MQ=255) gtgCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCTAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTaa < 1:158211/238‑1 (MQ=255) gggggggTTAATTCCGTTG‑AAACCCATATGGATATGGTTTGGGGCGAGCAGCCGGATATTCCCGGGAGTAATGTGGCTTGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTaa < 1:955181/234‑1 (MQ=255) cGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑CGGGCGTTGCTAACGTCCGGCTCGGAAAGGTT‑C‑CATTTTCCCCCCCTGCCCCGCGCTTACGGGGTTATAGAAAATAGCCGTCTCCGCGGCTCCCATTTTTCGGCCCTGAAAGGCCGTGGTGGG‑CTTTCTTCCCCTTCGGGACCGGGGGTAAATg > 2:667627/1‑238 (MQ=255) cATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGaa < 1:895444/173‑1 (MQ=255) tatggTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGGTTATAGAAAATAGCAGTAGCCGCGATGCCTATTTTTCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGGTAACTGCCCATAACGCCGCCCATCAGCAAggggggc > 2:1069245/1‑234 (MQ=255) gggCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGGGAC‑TGGGCGTTGCTTACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGGGCTTACTGGGTTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGGACTGAAAGGGCGTGATGGG‑CTTTCTTCCCCTTCGGGACTGGCGTTAACTGCCCACACTGCCCCCTGCCAGCAAGGAGGCCCGGGGCTgg > 2:175416/1‑239 (MQ=255) ggCGAGCAGGCGAATATTCACTGGAGTAATGTGGTTCGCGGAGAC‑TGGGCGTTGCTAACGGCGGGCGCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTgg < 1:883585/238‑1 (MQ=255) gAGCAGGCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑GGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATGGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATg < 1:1083506/238‑1 (MQ=255) agcagcCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGGTAACCTCGGGCTCGAAAAGGTT‑C‑AATATTACCGCCCCGCCCGGGGCTTACGGGATTATAGAAAATAACAGTAGCCCCGCTGCCTATTTCTCGGCCCCGCAAATCACAGATGGG‑CTTTCTTACCCCTCCGTACCGGCGTTTACTGACCCAATTCCCGCCCATCACCAAAGGGCGCCGCGGGTGGCTg > 2:478993/1‑237 (MQ=255) agcagcCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCgg < 1:1049868/144‑1 (MQ=255) agcagcCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCgg > 2:1049868/1‑144 (MQ=255) agcagcCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTTGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATg > 1:892638/1‑237 (MQ=255) aatatTCCCTGGAGTAAGGTGGCTCGCGGAGAC‑TGGGCTTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCat < 1:1069245/238‑1 (MQ=255) atatTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTTGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCat < 1:754170/238‑1 (MQ=255) tatTCCCTGGCGTAATGTGGATCGCGGAGAC‑TGGGCGTTGCTAACGTAGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCatct < 1:373356/239‑1 (MQ=255) tatCCCCTGGATTAAGGTGGCTGGGGGAGAC‑TGGGCGTTGCTAACGTCGGTGTCGAAAAGTTT‑C‑AATATTCCCGCCCTTACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCatct < 2:956913/239‑1 (MQ=255) ccTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGGTGCCTTACGCATCTATCTg > 1:296455/1‑239 (MQ=255) ttaTGTGGCTCGCGGGGAC‑TGGGCGTTGCTAACGTCGGGCCCGAAAATTTT‑T‑AATATCCCCGCCCTGACCGGTGCTTACGGGATTAAAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGAt < 2:363171/236‑1 (MQ=255) tAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGGGCTTACGGGATTATAAAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CGTTGTTCCCCTTCGGTACTGTCGTTAACTGCCCATAATCCCCCCTTTCAGCAAAGAGGCCCGTGGCTGGATGCCTTACCCACCTATCTCAAAGaaa > 2:21242/1‑237 (MQ=255) aggtgGCTCCAGGAGAC‑TGGGCGTTGCAAACGTCGGGCTCGAAAAGTTT‑C‑AATGTTCCCGCCCTGACCGGGGCTTACGTGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAAc < 1:841506/237‑1 (MQ=255) aTGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAAc < 2:892638/239‑1 (MQ=255) aTGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAAGGCCGCCGTGGCTGGATGCCTTACGCCTTTATCTGaaaagtaa > 1:278131/1‑233 (MQ=255) aTGTGGCGCGCGGAGAC‑GGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAAc < 1:667627/239‑1 (MQ=255) gggCTCGCGGAGCC‑TGGGCGTTGCTAACGTTGGGCTCGAAAAGTTT‑C‑AATATTCCCGGCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAACCTg < 1:329745/238‑1 (MQ=255) cgGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCCCCCTGACCGGGGCTTACGGGGTTTTAGAAAAAAGCAGTAGCCGCGATGCCTATTTATCGGCCCTGAAAGGCCGTGAGTGG‑CTTTCTTCCCCCTCGGTACTGGCGTTAAATGCCCCTATCGCCGCCCTTCCACCAGGCGCGCCCGGGCTGGGTGCCTTCCGCCTCCATCTGAAAGaaaaaccaccgaaaa > 2:1074363/1‑228 (MQ=255) | ATGGTTGGTTTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATG‑AAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGAC‑TGGGCGTTGCTAACGTCGGGCTCGAAAAGTTT‑C‑AATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGG‑CTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAACCTGACGTATA > NC_000913/1701390‑1701860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |