| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,909,229 | A→C | 18.5% | G146G (GGT→GGG) | pyrG ← | CTP synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,909,229 | 0 | A | C | 18.5% | 132.4 / 6.3 | 70 | G146G (GGT→GGG) | pyrG | CTP synthetase |
| Reads supporting (aligned to +/- strand): ref base A (31/24); new base C (3/12); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.87e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCAATCTTCGCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCA > NC_000913/2908992‑2909466 | tGCAATCTTCGCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATGCCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCa > 1:808096/1‑238 (MQ=255)tGCAATCTTCGCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAAAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTCCGGGGAACGGCAAGGATTCGATATCa > 1:34501/1‑238 (MQ=255)tGCAATCTTCGCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGGGCATAAACAGAGTGTGCTCCCGGCCAATTTCAACAGCCATCTGGCGAATCGCCTCGAGGAACGGCAAGAATTCGAAAacac > 2:167238/1‑239 (MQ=255) tCTTCGCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGCCAGGGGCATAAACAGAGGGTGCTCACGGCCAATTTCAACAGCCACCTGGCGAATCGCTTCGAGGAAAGGCAAGGATTCGATAACACCt > 2:1005796/1‑236 (MQ=255) gCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGGGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGGCGGGATTCGATATCaaaaaaggtacc > 2:916545/1‑228 (MQ=255) ccgttcgttCCCCGGAACAGCGCGATCTGAACGACAAATCGGGATGTCAGGCTGGATACCGAGGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTAccgc < 1:167238/238‑1 (MQ=255) tcttgccccGTAACCGCGGTATCTGAACGAAAATTCAGGGTGTCAGGCTGGATCCCGAGGGGGAGCATCTTTTTTACAGGGGTCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGGGCATAAACAGAGTGTGCTCACGGCAAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGAt < 2:319546/232‑1 (MQ=255) cgttcgCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGGGACTCGATTCAGGGAACGGCAAGGATTCGATATCCCCCACTGTAccgccgtct > 2:684581/1‑236 (MQ=255) cgttcgCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGAtt > 1:732996/1‑239 (MQ=255) tcgcgggttCTGAACAAAAAAGCAGGGTGGAAGGTTGGAATCCTGTGGAGATCGAGTTTTTTACAGGGTGCGGATGTGGTTTGGTTTTGTCTACCCATGGCGCTGCCTGGTACGTCGCCAGGGCCAGGTGCAAAAACGGAGTGGGCTCCCGGTCAATTTCAACAGCCATCTGGGAATTCGTTTCTAGGAACGGTAAGGATTCGATATCACCAACTGTACCGCCGATTTCTACCAGtact < 2:736382/231‑1 (MQ=255) cgcgATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGGGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGCATCGCTTCGGGGAACGGCAAGGATTCGAAATACCCCACTGTACCCCCGATTTTTACAAggcgaacg > 2:977924/1‑232 (MQ=255) cgcgATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGAAAACACCAACTGTACCGCCCATTTCTACCAgacatac > 2:488668/1‑232 (MQ=255) cgcgATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTGGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGACAGTGCTCCCGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGGGGAACGGCAAGGACTCGGTATCACCAACCGAACCCCCGATTTCTACCaagacaaaa > 2:14211/1‑231 (MQ=255) gctaTCTAAACGACAAATCAGGATGTCAGGCTGGATCCCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGtact < 1:122370/232‑1 (MQ=255) gcgATCTGAACGACAAATCGGGCTGTCAGGCTGGATCCCGAGGGAGGCAAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGACATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGtact < 1:997892/235‑1 (MQ=255) tCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTCCTGGACCGCCGATTTCTTCCAGTACGACGTCCTg > 1:872132/1‑239 (MQ=255) tGAAAGAAAAAGCGGGTTGTCGGGGTGGATGCCGATGGAGAGCCGCTTTTTTACGGGGTGCTGAGTCGGTTTGGTTTTGACTCCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGGGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGAc < 2:808096/239‑1 (MQ=255) gACAAATCAGGTTTTCAGGGTGGATACCGAGGGAGAGCAGCTTTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCCCCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCg < 2:139034/239‑1 (MQ=255) aaaTCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGCACGGCAAGGATTCGCTATCACCTACTGTACCGCCGATTTCTACACGTACTACGTCATGACCTTCAcc > 1:1046863/1‑238 (MQ=255) cAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCACCGTCAGGTGCATACACAGAGTGTGCTCACGGCCAACTTCAACAGCCATCTGGAGAAACGCTTCGAGGAAAGGCCAGGAATCGACATCCACACCTGTACCCCCGCTTTACACCAGCACAACATCCAGACCTTCCCCACCtt > 2:2972/1‑239 (MQ=255) ggcAGGTTGGATACCGATGGAGGGCAGCTTTTTTACAGAGTTCTGAGTCGGTTTGGTTTTGAC‑TCACCGAACCCTGCCATGAACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCCCGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCa < 1:576075/236‑1 (MQ=255) ggggggggATACCGGTGGAGGGCCGCCTTTTTACAGGGGTCTGAGTCGGTTTGGTTTTGACTTCACCAGGCGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcg < 1:371566/233‑1 (MQ=255) cctgCTGGATACCGTTGGAGAACCTCTTTTTGACAGGGTGCTGGGGCGGTTTGTGTTTGACTCCACCAGCCGCCGCCATGTACGGCCCCAGCGGCAGGGGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcg < 2:830850/236‑1 (MQ=255) cAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCCCCAGACGCTGCCATGTCCGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcg < 1:1005796/239‑1 (MQ=255) cAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTTTACCGCCGATTTCTACCAGTACATAGGCATACCCCTCGCCACCTTCCAGCAc > 2:129548/1‑238 (MQ=255) aGGTTGGATACCGATGGAGGGCAGCTTTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCCCCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcg < 1:916545/238‑1 (MQ=255) ggttGGTTACCGGGGGAGGGCAGTTTTTTTAAAGGGGGCGGGGTGGGTTTGGTTTTGACTTCACCAGACGCTGCCAGGTACGGCACAAGCGTCAGGTGCATAAACAGGGTGTGTCCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCATGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcgcg < 2:43513/236‑1 (MQ=255) gATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCCTGACCTTCGCCACCTTCCCACACGCGCCCtt > 2:720907/1‑239 (MQ=255) aTGGAGAGCAGCTTTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGATTTCTAc < 1:146300/188‑1 (MQ=255) aTGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTAc > 2:146300/1‑188 (MQ=255) aTGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCtt < 1:551561/208‑1 (MQ=255) aTGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCtt > 2:551561/1‑208 (MQ=255) gagaGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCATAACTACGGCATGACCTTCGCCACCTTCCAGCACGCCCCCTTTGATTGCGtt > 2:305218/1‑239 (MQ=255) gagaGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATCTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGCTTTCTACCAGTACTACGTCCTGACCTTCGCCCCCTTCCAGCACGCGCCCTTTGATTGCGtt > 2:1046502/1‑239 (MQ=255) cagcTCTTTTACAGGGTGCTGGGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTAATTGCGTTAGTg < 1:45654/238‑1 (MQ=255) cagcTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGGACCGCCGCTTTCTACCAGTACTACGGCATGACCTTCCCCACCTTCCAGCACACGCCCTTTGATTGCGTTAATGa > 2:144191/1‑239 (MQ=255) agcTCTTTTGAGGGGTGCGGGGTGGGTTTGGTTTTGACTTCCCCCGGCGCTGCAATGTCCGGCACAGGCGGCAGGTGCATAAACAGTGTGTCCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTg < 2:989125/237‑1 (MQ=255) tctTTTACTGATTGCTGAGTCGGTTTGGGTTTGACTTCTCCAGACGGTGCCTTTTACGGCACCCGCGTCAGGTGCTTAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTTCCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGAt < 1:692069/224‑1 (MQ=255) tctTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCCCCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGAtgtg < 1:874466/239‑1 (MQ=255) gTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACGGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAAGCGCCCTTTGTTTGCGTTAGTAATTTGGGGAATaa > 2:410210/1‑236 (MQ=255) gTGCTGAGGTGGTTAGGTTTTGACTTCACCAGACTCGCCCATGTGCGCCACCAGTGTCAGGTGCATAAACGGGGTGTGATCCAGGCCAATTTCAACAGCCATTTGGCGAATCGCTTCGAGGAACGGAAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATa < 1:684581/235‑1 (MQ=255) gctggttggttttggtttTGACTTCCCCAGACCGGGCCATGGACGGCCCCAGGTTGAGGGGCATAAACAGGGGGTGCCCACAGACAATTTCACCCACCATCTGGCGAACCGCTTCGGGGAACGGCAAGGATTCGATATCCCCTACTGTACCGGCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTg < 2:680180/228‑1 (MQ=255) gCTGAGTCGGTTTGGTTTTGCCTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGGGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTTTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTg < 1:816193/238‑1 (MQ=255) tgggtttggtttTGCCTTCCCCAGACGCTGCCATGTACGGCACCAGCGTAAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGt < 1:305218/236‑1 (MQ=255) gtttggtttTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTCCTGTACCGCCGGTTTCTACCAGAACTACGGCATGACCTTCCCCACCTTCCAGCCCGCCCCCTTTGATTGCGTTAGTGCTGGGCGGAAAAACACGCAC‑GGGTgg > 2:262455/1‑237 (MQ=255) gtttggtttTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACAGCAAGGATTCGATATCACCTACTGTACCGCCGCTTTCTACCAGTACTACGTCCTGACCTTGCCCAACTTCCCGCACCGGCTCCTTGCTTGCGTTGGGGATTTGCGGGATAACCCGGAC‑GGGTggc > 2:241945/1‑237 (MQ=255) cGCTGCCATGTACGGCCCCAGCGGCAGGTTCATAAACAGAGGGTGCCCACGGCCAATTCCAACAGCCATCTGGCGAATCTCTTCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCgcggc < 1:129548/236‑1 (MQ=255) gTACGGCCCAAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATCCCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCa < 1:1046502/239‑1 (MQ=255) gTACGGACCCAGCGTCAGGTGCAAAAACAGAGTGGGCTCACGGCCAATTTCAACAGCCCTTTGGCGAATCGCTCCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCa < 1:488668/239‑1 (MQ=255) tACGGCCCCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCCCCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAg < 1:806444/239‑1 (MQ=255) cACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGAt > 2:204613/1‑177 (MQ=255) cACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGAt < 1:204613/177‑1 (MQ=255) cACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGt > 1:107421/1‑239 (MQ=255) cACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGCGGTTCTTTACGCAGAACg > 1:261109/1‑238 (MQ=255) aCCAGCGTCAGGTGCATAAACAGAGGGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGt < 1:291825/238‑1 (MQ=255) gCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCagag < 1:247627/239‑1 (MQ=255) aGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGt > 2:946819/1‑188 (MQ=255) aGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGt < 1:946819/188‑1 (MQ=255) tGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTCCGCAGAACGTCAGAGTAGAtcg > 1:834733/1‑236 (MQ=255) ctaaaaCGGGGTGTGCCACCGGCCAATTTCCACCGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCCCCCACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑c < 2:842300/236‑1 (MQ=255) agTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGCGTGGAAAGGA‑CCCGTGGTGa > 1:958580/1‑239 (MQ=255) gtgtGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGGTCTTTACGCAGAACGTCAGATTAGATACGA‑CCCGGGGTGaa > 1:480620/1‑239 (MQ=255) tgtgCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCACGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGGGGTGAAg > 1:284982/1‑239 (MQ=255) gtgCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGCGGTAGTCACCGCGGCGTTCTTTACGCCGAACGTCCGAGAGGATACGG‑CCCGGGGGGAAgg > 2:983770/1‑238 (MQ=255) ctaaCGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGGCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTTCGTTGGAGATGTTCGGAATAATC‑GTACAGGTTGGGCCGAGGTAGTCACCGCCGCGTTTTTTTTCCAGACGGTCAGACTAGA‑ACGATCCAGTGGGGAAggtgt > 2:850220/4‑239 (MQ=255) cTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAGGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcg < 2:83860/124‑1 (MQ=255) cTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCAcg > 1:83860/1‑124 (MQ=255) ggcataaTTACAACCCCCGTCGGGGGACTCGCGTTGAGGAGCGGGAAGGATTCACTTTCCCCTACTGGCCCGCCGATTTCTACCAGTGCTACGTCATGACCGTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCGCCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGTGGTGAAGTTGTTgcg < 2:34501/234‑1 (MQ=255) cGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGGAGTCACCGCGGGGTTCTTTACGCAGAACGTCAGAGTAGATAAGA‑CCCGGGGTGAGATTGTTgcg > 2:624441/1‑239 (MQ=255) aaCAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGCCAGAGCAGAGCAGA‑CCCGCGGGGACGTTTTTGcggcggggacctt > 2:46060/1‑232 (MQ=255) cGAATCCTTTCGAGGAACGGCAAGGATTCGATACCCCCTACTTGCCCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGa < 1:983770/238‑1 (MQ=255) aaTCGCTTCGAGGAACGGCGAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTCCGGAATAACCTTCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGCGGTGACGTTGTTGCGGGGGCCCAATTTTGTagacataaaa > 2:210051/1‑229 (MQ=255) aaTCGCTTCGAGGAACGGCAAGAATTCGAGATCCCCTACCGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGaaa < 1:318869/238‑1 (MQ=255) cACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACAAATGAAAAGCTCGTAGTGGCCCAGGTCACGGGCGGTTTCa > 1:374605/1‑239 (MQ=255) | TGCAATCTTCGCACGTTCGTTCGCCGGAACAGCGCGATCTGAACGACAAATCAGGATGTCAGGCTGGATACCGATGGAGAGCAGCTCTTTTACAGAGTGCTGAGTCGGTTTGGTTTTGACTTCACCAGACGCTGCCATGTACGGCACCAGCGTCAGGTGCATAAACAGAGTGTGCTCACGGCCAATTTCAACAGCCATCTGGCGAATCGCTTCGAGGAACGGCAAGGATTCGATATCACCTACTGTACCGCCGATTTCTACCAGTACTACGTCATGACCTTCGCCACCTTCCAGCACGCGCTCTTTGATTGCGTTAGTGATGTGCGGAATAACCTGCAC‑GGTTGCGCCGAGGTAGTCACCGCGGCGTTCTTTACGCAGAACGTCAGAGTAGATACGA‑CCCGTGGTGAAGTTGTTGCGGCGGCTCATTTTGGTACGAATGAAACGCTCGTAGTGCCCCAGGTCCAGGTCGGTTTCA > NC_000913/2908992‑2909466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |