Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,012,219 T→G 12.0% S253R (AGT→AGG yqeA → putative amino acid kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,012,2190TG12.0% 258.8 / 2.5 105S253R (AGT→AGGyqeAputative amino acid kinase
Reads supporting (aligned to +/- strand):  ref base T (37/52);  new base G (12/2);  total (51/54)
Fisher's exact test for biased strand distribution p-value = 2.97e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

AAAGCTCTGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTG  >  NC_000913/3011983‑3012454
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
aaaGCTCGGGTAGATGCAGGGCAGGTGGTGATCCCCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGACAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTg                                                                                                                                                                                                                                            <  1:1024641/238‑1 (MQ=255)
      ctGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAATGGATGCTGa                                                                                                                                                                                                                                     >  1:109854/1‑239 (MQ=255)
      ctGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCCCGATCGCCTGTCATTAAGTGTAGCTGa                                                                                                                                                                                                                                     >  1:580475/1‑239 (MQ=255)
       tGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATTCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGCAAAGAGAATGAACAGTGGCTCGATTGCCCGTCATTAAGGGATgtcga                                                                                                                                                                                                                                     >  1:326709/1‑234 (MQ=255)
       tGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGGGGCCCGACAGCCGGTCATTAAGGGATGCGGaa                                                                                                                                                                                                                                    >  2:543422/1‑239 (MQ=255)
       ggggaaaTGCTGGTCGGGGGTGGATCCCCGGTGGCGGTGGTGGTATCCCTTTTTTTCGTGAGGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGaa                                                                                                                                                                                                                                    <  2:326709/233‑1 (MQ=255)
         gttgATGCAGGTCAGGTGGTGATCACCTTTGGCGGGGGTGGTTTCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACg                                                                                                                                                                                                                                  <  2:690509/236‑1 (MQ=255)
                       ggtggtGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGaagaag                                                                                                                                                                                                                    <  1:137010/239‑1 (MQ=255)
                        gtggtgATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGACCAGTGGCTCGGTCGCCTGTCCTTTAGTGATGCTGAACGCCTTTTCAaaaaag                                                                                                                                                                                                                    >  1:173060/1‑238 (MQ=255)
                        gtggtgATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATAAAAAAGGGCCCCATCCCCCGTCATTAAAGGATGCGGAAAGCTTTAACGAAAAAgg                                                                                                                                                                                                                   >  2:73483/1‑239 (MQ=255)
                              aTCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAACAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTTTCGCAAAAGGGCAttt                                                                                                                                                                                                             >  1:1084591/1‑239 (MQ=255)
                              aTCACCGTTGGCGGAGGGGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGAGCCCGTTTAGCAGAAAGTATTGATGCCGGAATGCTGGTAATTCTCAATGCGGTTGAAAAAGGGGCCATTAACTTCGGAAAATAGAATGAACATGGGTCCGGACGCCCGTCATTCAGGGGTGCTGAACGCGTAATCGAAGAAAGGCAttt                                                                                                                                                                                                             >  2:961999/1‑239 (MQ=255)
                                  ccGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCCCGATCGCCCGTCATTAAGTGATGCTGAAAACTTTATGGAAAAAGGTCAtttttgg                                                                                                                                                                                                         >  2:965604/1‑236 (MQ=255)
                                   cGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGAACGCCTGTCATTAAGGGATGCTGAACGCTTTATCCAAAAAGGGCATTTTGCGa                                                                                                                                                                                                        >  2:319334/1‑239 (MQ=255)
                                    tttGGGGGTGGTGGTTTCCCTTTTTTTGGTGAAGTTAACCATCTGGGTGGGGCCAGGGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGaa                                                                                                                                                                                                       <  2:964097/238‑1 (MQ=255)
                                    gTTGGGGGGGGTTGTATCCCTGTTATTCGGGGAGGTACCCAGTGGCGTGGTGCCAGCGCGGTTATCGATAAAGACGGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGaa                                                                                                                                                                                                       <  2:65027/239‑1 (MQ=255)
                                    gTTGGCGGGGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGaa                                                                                                                                                                                                       <  1:115315/239‑1 (MQ=255)
                                             ggtggtATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAAAAGTGGCCCGATCGCCCGTCATTAAGTGTTGTTGACACCTTTATCGAAGAAGGGCATTTTGCGAAAGGTTCttt                                                                                                                                                                                              >  1:976411/1‑237 (MQ=255)
                                                    tctcTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCt                                                                                                                                                                                       <  1:302066/236‑1 (MQ=255)
                                                    tCCCTGTTTTTTGTGAAGGTAACCTCTTGCGGGGTGCCATGGGGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCt                                                                                                                                                                                       <  2:661876/239‑1 (MQ=255)
                                                     cccTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGaa                                                                                                                                                                                                       <  1:1051164/222‑1 (MQ=255)
                                                        tGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTACCTTCGGTAAAGAGAATGAACAGGGGCTAGAACGCTGGTCATTAAGTGATTCTGAAGGCGTTATCGGCGAGGGGAATTTTGGTGAAGGTTCTTACATGCCTAAAg                                                                                                                                                                                   >  2:1053136/1‑239 (MQ=255)
                                                        tGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAg                                                                                                                                                                                   >  1:238062/1‑239 (MQ=255)
                                                         gTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCCTTAAATGATTTTGAACACTTTATGGAAGAAGGGCATTTTTCGAAAGGTTCTATAGTCCCTAAAgg                                                                                                                                                                                  >  2:806297/1‑238 (MQ=255)
                                                         gTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGGGATGCTTAAACCTTTATCGAAGAAGGTCATTTTGCGCAAGGTTCTATGTTGCCTAAAGt                                                                                                                                                                                  >  1:577681/1‑239 (MQ=255)
                                                         gTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCCGTCATTAAGGGATGCTGAACGCTTTATCAAGGAAGGGCATTTTTCGAAAGGTACTATGGTGCCCaaaag                                                                                                                                                                                  >  2:480500/1‑237 (MQ=255)
                                                            aatCGGGAAGGTACCCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCGGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGa                                                                                                                                                                               <  1:1053136/237‑1 (MQ=255)
                                                              tCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAg                                                                                                                                                                             <  1:806798/239‑1 (MQ=255)
                                                               cGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGTTATGCTGATCATTCTGACGGCGGTAGAAAAAGTGGCCATTAACTTCGGGAAAGAGAATGAACAGGGGCTCCATGCCCTGTCATTAAGCGGGTCTGAACGCTTTATCGCGGAAAGGCATTTTGTGAAAGGTGCTTTGCTGCCaaaaaggaaaga                                                                                                                                                                            >  2:901589/1‑231 (MQ=255)
                                                                gTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCACTTCATTAAGTGATGCTGAACGCTTTATCGACGAAGGGCATTTTGGTAAAGGTTCTATGCTCGCTAAATTGGaa                                                                                                                                                                              >  1:489407/1‑236 (MQ=255)
                                                                  gAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGGGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTg                                                                                                                                                                          >  1:881799/1‑238 (MQ=255)
                                                                         aCCATCTGCGTGGTGCCAGCGCGGTTATCGATCAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTAATTAAGTGATGCTGAACGCTTTATTGAAGAAGGCCATTTTGCGAAAGGTTCTAGGCTACCTACAGTGGCAGCTACCGCcgcg                                                                                                                                                                  >  1:220853/1‑239 (MQ=255)
                                                                                          ggggcgttttacGAAAAAAACTGGGCAGGCTCCCGTTTAGAAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCgcgc                                                                                                                                                 <  2:970971/228‑1 (MQ=255)
                                                                                           gcgcGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGcccttcggca                                                                                                                                                >  1:304644/1‑233 (MQ=255)
                                                                                           gcgcGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCa                                                                                                                                                >  1:782217/1‑239 (MQ=255)
                                                                                             gcgGTTTGCGATAAAGACTGGGCCAGCCCCGTTGTAGCAGAAAGGATTGATGCCGATATGCTGTTCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCgcgc                                                                                                                                                 <  2:220853/236‑1 (MQ=255)
                                                                                             gcgGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCgcgc                                                                                                                                                 <  1:459584/236‑1 (MQ=255)
                                                                                             gcgGTTACCGAAAAAGACTGGGCCAGGGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAgg                                                                                                                                              <  1:957736/239‑1 (MQ=255)
                                                                                             ccgtttttCGATAAAGTCTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAgg                                                                                                                                              <  2:464296/232‑1 (MQ=255)
                                                                                                gTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCCGTACTTAAGCGATGCTGATCACTTTATCGACGAAGGTCCTTTTGTAAAAGGTTTCCAGCCGCCTAAACTGGACGTGGCCGCCCCATTGGTTCGGTCTCGCCCAGGCCg                                                                                                                                           >  1:501046/1‑239 (MQ=255)
                                                                                                       aTAAATACGGGGCCAGGCTCCGTTTAGCAGAAATTATTGATGCCGATTTGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCa                                                                                                                                    <  2:109854/239‑1 (MQ=255)
                                                                                                       aTAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGGGATGCTGACAGCTTTTTTGAAGAAGGGCATTTTGCGAAAGGTTTTATGCTGCCTAAAGTGGAAGCTGCCGCCCCGTTTGTCGGCTCTCCCGCGGGTCGGGaggac                                                                                                                                    >  2:194708/1‑235 (MQ=255)
                                                                                                        taaaagcTGGGCCAGGGCCCGTTTAGCAGAAAGGATTGATGCCGATATGCTGATCATTCTGACTGGGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCa                                                                                                                                    <  2:580475/232‑1 (MQ=255)
                                                                                                         aaagcttGGGCCAGGGCCCGTTTAGCAAAAATGATTGAGTCCGATATGCCGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACt                                                                                                                                  <  2:976411/233‑1 (MQ=255)
                                                                                                           aGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGCGGAAGCTGCCGCGTCGTTTGCTCGCTCTCGCGCAGGTGCTGATGCACTGa                                                                                                                                >  1:489634/1‑239 (MQ=255)
                                                                                                              cTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTa                                                                                                                             <  2:782217/239‑1 (MQ=255)
                                                                                                                    cAGGGCCCTTTTAGCAGAAATGATTGATGCCGATATGGTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAGCTTCGGGAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTa                                                                                                                        <  2:173060/238‑1 (MQ=255)
                                                                                                                       cgcCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCCCGTTTGCTCGCCCCCCCGCAGGTCGGGAAGAAATGATTACCGTATTGa                                                                                                                    >  2:258640/1‑239 (MQ=255)
                                                                                                                       cgcCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGGTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGa                                                                                                                    >  1:396316/1‑239 (MQ=255)
                                                                                                                       cgcCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGGCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCCGGTCTGGAAGCACTGGTTACCgctttt                                                                                                                     >  1:436823/1‑233 (MQ=255)
                                                                                                                       cgcCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGGCATTTTCGGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGGCGCCACGTTTTGTCGCTCTCGCGCCGGGAGTGGAGCACTGATTACCGGATTgg                                                                                                                    >  2:600731/1‑238 (MQ=255)
                                                                                                                       cgcCCGTTTAGCAGAAATGATTAATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTATCATTAAGTGTTGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGGCCAATGCGCCCTAAAATGGAATGTGCCCCCCGGTTTTCTCGCCTTCGCGCGGGTCGTGAAGCACTGTTTAcccggttga                                                                                                                    >  1:482317/1‑232 (MQ=255)
                                                                                                                         cccGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTGAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTTCTCGCTCTCGCGCGGGGCGGGAAGCACTGATTACCGTATTGGGc                                                                                                                  >  2:619866/1‑239 (MQ=255)
                                                                                                                          cggTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGAGTGCGGTAGAAAAAGTGGCCATTAACTTCGGAAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGc                                                                                                                  <  1:513910/236‑1 (MQ=255)
                                                                                                                            cggttcacAGAAATGGTTGAGTCACATTTGCTGACGAGTGTGACTGCGGTAAAAAAAGGGGCCATTAACTGCGGTAAAGAAAATGAACAGGTGCTGTATTGCTTGGCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTGATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTATCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCaa                                                                                                                <  2:659451/232‑1 (MQ=255)
                                                                                                                             tttAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGCAAGGTTCTATGCTGCCTTAAGTGGAAGATTCCGCCTCGTTTGCGCGCCCTCGGCGAGGTCTGGAAGGACCGATTACCGGATTTGGCaaaa                                                                                                              >  2:363412/1‑238 (MQ=255)
                                                                                                                             tttAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCCCTGATTACCGTATTGCGCaaa                                                                                                               >  1:759530/1‑238 (MQ=255)
                                                                                                                                 aGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTCAAGAGAATGAACAGTGGCTCGATCGCCGGTCATTAAGGGATGCTTAACGCTTTATCGAAGACGGTCATTTTGCGAAAGGTTCTATGCTGCCCAAAGGGGACGCTGCCCCCTCTGTTGCTCGCTCTCCCGAAGGGCGGGCAGGACTGATTGCCGGATTCGCCAAAGCGa                                                                                                           >  2:801557/1‑239 (MQ=255)
                                                                                                                                       aaTGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAaagaag                                                                                                     <  1:363412/239‑1 (MQ=255)
                                                                                                                                       aaTGATTGATGCCGATATGCGGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAaaga                                                                                                       <  1:953219/237‑1 (MQ=255)
                                                                                                                                        aTGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTgctcgct                                                                                                                                                        >  2:909268/1‑187 (MQ=255)
                                                                                                                                        aTGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTgctcgct                                                                                                                                                        <  1:909268/187‑1 (MQ=255)
                                                                                                                                            ttgatGCCGATATGCTGATCATTCGGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGAtt                                                                                                <  1:73483/239‑1 (MQ=255)
                                                                                                                                             tgatGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGAtt                                                                                                <  1:169161/238‑1 (MQ=255)
                                                                                                                                               atGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGaa                                                                                             <  1:965604/239‑1 (MQ=255)
                                                                                                                                                tGCCGATATGCTGATCATTCTGGCTGGGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAgg                                                                                           <  1:137987/239‑1 (MQ=255)
                                                                                                                                                        tGCTGATCATTCTGACTGCGGTAGAAAAAGGGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCa                                                                                                                                    <  1:1045402/191‑1 (MQ=255)
                                                                                                                                                             aTCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAACCGAAAGAAGGGGTTGAAGGCAAAACAGGAAc                                                                               >  1:180063/1‑239 (MQ=255)
                                                                                                                                                             aTCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAACTGCCGCCTCGTTTGCTCGCTCTCGGGCAGGTCGGGAAGCACTGATTACCGGATTGGGCAAAGCGAAAGAAGGGATTGAAGGCAAAAAAGGaag                                                                               >  2:1050475/1‑238 (MQ=255)
                                                                                                                                                             aTCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCATGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCAtt                                                                                                                                                                                                              <  2:734959/112‑1 (MQ=255)
                                                                                                                                                             aTCATTCTGACTGCGGTAGAAAAAGGGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGGGATGCTGAACGCTTTATCGAAGAAGGTCAtt                                                                                                                                                                                                              >  1:734959/1‑112 (MQ=255)
                                                                                                                                                                  tCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTAAGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGGCGGGAAGCCCTGCTTACCg                                                                                                                          >  2:1045402/1‑191 (MQ=255)
                                                                                                                                                                       cTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTTCCGCCCCGTTTGCACGCTCCCGCGCAGGTCGTGAAGCACTGATTACCGGATTGGGCAAAGCGAAAGAAGGGAATTAAGGCAAAACAGGAAAgggggatttt                                                                     >  2:1012953/1‑231 (MQ=255)
                                                                                                                                                                       cTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATGTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGt                                                                     <  1:168680/239‑1 (MQ=255)
                                                                                                                                                                            gTAAAAAAAGGGGCCTTTAACTTGGGAAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGAGGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGt                                                                 <  2:180063/238‑1 (MQ=255)
                                                                                                                                                                                aaaaaGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGGTTGCTCGCTCTCGCGCAGGGCGTGAAGACCTGATTACCGTATTGAGCAAAGCGAAAGAAGGGGTTGAAGGCAAAAAAGGAACGGGGAttttgcaagaaatt                                                            >  2:880445/1‑228 (MQ=255)
                                                                                                                                                                                       ggCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTTCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGGGCAAAGCGGAAGAAGGGATTGAAGGCAAAACAGGAACGGTAGTTTTTCGGGAATTTAAAGGcc                                                     >  1:1070579/1‑239 (MQ=255)
                                                                                                                                                                                         ccctttatttCTGTATAGGGACTGTACAGTGGCACGAGCGCCTGTCCATAATTGATGCTGAACGGTTTACCAAAGAAGGTCATTTTGCGAAAGGTTCTATGATGCCTAAAGTGGAAGCTGCCGTCTCGTTTGCTCGCTATCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  2:176239/231‑1 (MQ=255)
                                                                                                                                                                                          ctttaaatggggTAAAGAGAAGGACCGGTGGCTCGATCGCCTGTCATTAAGGGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  2:577681/228‑1 (MQ=255)
                                                                                                                                                                                          ctttATCTTCGGTAAAGGGAATGAACAGGGGCTCGATTGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  2:304644/236‑1 (MQ=255)
                                                                                                                                                                                          ctttAACTTCGGTAAAGAGAATGAACAGGGGCACGGTCGGCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGGCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGGATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  2:436823/236‑1 (MQ=255)
                                                                                                                                                                                          cATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  1:389157/238‑1 (MQ=255)
                                                                                                                                                                                          cATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  1:433491/238‑1 (MQ=255)
                                                                                                                                                                                          cATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  1:543422/238‑1 (MQ=255)
                                                                                                                                                                                          cATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCCCCTGTCATTAAGGGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCgg                                                   <  1:997660/238‑1 (MQ=255)
                                                                                                                                                                                               aCTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGt                                                                 <  1:1065178/219‑1 (MQ=255)
                                                                                                                                                                                                  tCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTTCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGGGAAAGAAGGGGTTGAAGGAAAAACAGGAACGGTGGTTTGACCGTAATTTAAAGGCCGGGTGGGaaaa                                          >  1:1047225/1‑238 (MQ=255)
                                                                                                                                                                                                   cGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCa                                                                                                                                    >  2:71933/1‑148 (MQ=255)
                                                                                                                                                                                                   cGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCa                                                                                                                                    <  1:71933/148‑1 (MQ=255)
                                                                                                                                                                                                       aaaGAGATTGAACAGTGGCTCGTTCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCAt                                     <  2:881799/239‑1 (MQ=255)
                                                                                                                                                                                                       aaaGAGAATGAACAGTGGCTCGATGGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCAAAAGTGGAAGCTGCCGTCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCAt                                     <  1:1050475/239‑1 (MQ=255)
                                                                                                                                                                                                                    aGTGGCTCGATCGCCTGGCATTAAGTTATGCTGAACGCTTTATCGAAGAAGGGCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGAtt                        <  1:194708/239‑1 (MQ=255)
                                                                                                                                                                                                                     gTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGaa                                                                                                                                                                                                       <  1:172591/63‑1 (MQ=255)
                                                                                                                                                                                                                     gTGGCGCGTTCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGACTAAAGTTGAAGGTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAACACTGATTACCGAATTGGGCAAAGCGAAAAAAGGGATTGAAGGGAAAACAGGAACGGTGATTTTTAAGTAATTTAAAGGCCGGGTGGGGAAAACCAACCAGCCCAAAAttt                       >  2:1002568/1‑238 (MQ=255)
                                                                                                                                                                                                                       ggCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTTAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGt                                                                 >  2:262566/1‑195 (MQ=255)
                                                                                                                                                                                                                       ggCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGGTTTTTCAGGAATTTAAAAGCCGGGGGGGGAATACCAACCGGCCAAAAATTGTc                     >  2:391795/1‑239 (MQ=255)
                                                                                                                                                                                                                       ggCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGt                                                                 <  1:262566/195‑1 (MQ=255)
                                                                                                                                                                                                                        gCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGGGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTTTCAGTAATTTAAAGGCCGGGGGGGAAAAACCAACCGGCCAAAAATTTTCa                    >  2:322247/1‑239 (MQ=255)
                                                                                                                                                                                                                              tCGGCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCaagtaa               <  1:17189/238‑1 (MQ=255)
                                                                                                                                                                                                                               cGCCTGTGATTAAGTGATGCTTAACGCTTTAGCGAAGGAGGTCATTTTGCGTAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCaagtaagt             <  1:859797/239‑1 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
AAAGCTCTGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAATTTAAAGGCCGGGTGGGTAATACCATCCGGCCAAAGATTGTCAAGTAAGTGCGCTTTGTTG  >  NC_000913/3011983‑3012454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: