| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,459,579:1 | +G | 6.2% | coding (891/1311 nt) | fadI ← | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,459,579 | 1 | . | G | 6.2% | 258.4 / 11.8 | 64 | coding (891/1311 nt) | fadI | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit |
| Reads supporting (aligned to +/- strand): ref base . (31/29); new base G (2/2); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.65e-01 | |||||||||||
TCGAACCGCCAAGCACGTTAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGAACGGTGCGCTAATGCA > NC_000913/2459308‑2459861 | tCGAACCGCCAAGCACGTTAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAc > 1:181202/1‑277 (MQ=255)tCGAACCGCCAAGCACGTTAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAc < 2:181202/277‑1 (MQ=255)tCGAACCGCCAAGCACGTTAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAAt > 2:93263/1‑287 (MQ=255) ccAAGCACGTTAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGccc < 1:273721/289‑1 (MQ=255) aaGCACGTTAAATTTGCTAGCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCGCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGAACAGGCTGGACCGAGCAACATGTCCCGCCAGACATCACTCGCAGGAAATGCGTAGCTGCGCAGATACCCCAGA‑GGCACCAGCCCTAATTATTTCGCCggg > 1:259503/1‑289 (MQ=255) aCGTTAAAGTTGCTATCGTCCAGTTCGCCAGTGGCATGGGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGAtt < 2:291995/289‑1 (MQ=255) tAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCCCCAGCCCTAATTCTTTCCCCCGGGATTCCGt > 2:494691/1‑289 (MQ=255) tAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAcc < 1:71718/260‑1 (MQ=255) tAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAcc > 2:71718/1‑260 (MQ=255) tAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAg > 2:146226/1‑288 (MQ=255) aTTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGCCATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGtca > 1:512140/1‑288 (MQ=255) cTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGc < 1:146226/289‑1 (MQ=255) aTGTGCACGCCCACGTGATTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGt < 1:490938/288‑1 (MQ=255) gCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGt > 2:51250/1‑289 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACCTGTCCTGCCAGACATCAATCGCCGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACAAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCCGGATCACCGCTGCCGCGCCATCGGCCAGCGCCGTACTGTTTgccg > 2:283805/1‑288 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGCGGGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTgcc > 2:389595/1‑288 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAcc < 1:25314/209‑1 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAcc > 2:25314/1‑209 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTgccg > 2:164950/1‑288 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCCCGCCATCGGTCAGCTGCGTACTGTTTgccg > 2:507247/1‑288 (MQ=255) cACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCCTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCTGATACCCCAGCGGGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTgcc > 2:474710/1‑288 (MQ=255) aaCTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTTCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGAt < 1:47460/286‑1 (MQ=255) tCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGgcg < 1:51250/289‑1 (MQ=255) tCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGgcg < 1:93263/289‑1 (MQ=255) gCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCAAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCa > 1:239379/1‑289 (MQ=255) aGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCt > 2:522526/1‑289 (MQ=255) aGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCt > 2:85120/1‑289 (MQ=255) aaGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCaa > 2:99383/1‑289 (MQ=255) tCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAgg > 1:290511/1‑289 (MQ=255) gTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAcc < 1:110900/145‑1 (MQ=255) gTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCAcc > 2:110900/1‑145 (MQ=255) tatCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTAcc < 1:85120/289‑1 (MQ=255) tatCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTAcc > 2:435435/1‑289 (MQ=255) tatCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTAcc < 1:522526/289‑1 (MQ=255) tCGATCAATGTCAGATCGCTCATCTTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACcgc < 1:283805/289‑1 (MQ=255) ccAGAGCGCGCAGCGTCAAACCGGGACGGTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATAttgt < 2:438573/287‑1 (MQ=255) cTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGGCAGGAATTACCGCGAATTTTTTTTTCttgc > 2:517450/1‑286 (MQ=255) cTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGGGGAATTACCGCGACTATTGTTGTCTTCg > 2:463527/1‑288 (MQ=255) cATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACa < 1:99383/289‑1 (MQ=255) tCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTCGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAg < 1:278793/289‑1 (MQ=255) cGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTTTTTGACAAGc > 1:432956/1‑289 (MQ=255) cAAACCGGCACGCGCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGAAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCgg < 1:494691/288‑1 (MQ=255) aaaaCCGGCACGCCCCCGCGCCGGCGGTGTTTACCAGGCGGGACCGAGCAACAGGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGgt < 2:424658/288‑1 (MQ=255) aaCCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGgttg > 2:363262/1‑289 (MQ=255) gCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTtat > 2:85257/1‑289 (MQ=255) cACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTtat < 1:164950/288‑1 (MQ=255) gcgccagcgccagcgGGGTTGAACAGGCTGGACCGAGCAACAGGTCCTGCCAGAAATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGAACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAagg < 1:385150/286‑1 (MQ=255) gCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAagg < 2:133241/289‑1 (MQ=255) tCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGGGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAagga < 2:259503/288‑1 (MQ=255) ggTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAgg < 1:363262/286‑1 (MQ=255) cAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCAcc > 1:5137/1‑288 (MQ=255) gCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACctct > 1:276189/1‑288 (MQ=255) aGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAagg > 2:494096/1‑254 (MQ=255) aGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAagg < 1:494096/254‑1 (MQ=255) aGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATACGGAGGGATAAAGGCCGTCATCACCTCTTCTTTGAttt > 2:140113/1‑289 (MQ=255) gCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGAcaa > 2:376532/1‑287 (MQ=255) cAGGAAATGCGTAGCTGGGCAGATACCCCAGC‑GGCACCGGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCGGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACg < 1:517450/289‑1 (MQ=255) aGCTGCGCTGATACCCCAGCGGGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGaa < 1:474710/288‑1 (MQ=255) aGCTGCGCAGATACCCCAGCGGGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGaa < 1:389595/288‑1 (MQ=255) aGCTGCGCAGATACCCCAGC‑GGCCCCAGCGCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGAACg < 1:142779/289‑1 (MQ=255) gCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGAACgg > 2:50041/1‑289 (MQ=255) aCCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACCCTGATGCGAACGGTGCGCTAATg > 2:70395/1‑288 (MQ=255) ccccAGC‑GGCACCGGCCCTAATCCTTTCGCCCGGGATTCGGTCATCAGGATCACCGCTGCCGCGCCACCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGAACGGTGCGCTAATGCa < 2:5137/289‑1 (MQ=255) ccccAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGAACGGTGCGCTAATGCa < 1:435435/289‑1 (MQ=255) | TCGAACCGCCAAGCACGTTAAATTTGCTATCGTCCACTTCGCCAGTGGCATGTGCACGCCCCAGTGCTTCACGAGCAAAACGTTCACTACCCAGCAACTGAATATTCGCCAGCGTCTGAGCTGCAAAGGCTTCGTGCATATCGATCAATGTCAGATCGCTCATCGTCAAACCGGCACGCTCCAGCGCCAGCGGTGTTGACCAGGCTGGACCGAGCAACATGTCCTGCCAGACATCAATCGCAGTAAATGCGTAGCTGCGCAGATACCCCAGC‑GGCACCAGCCCTAATTCTTTCGCCCGGGATTCAGTCATCAGGATCACCGCTGCCGCGCCATCGGTCAGCGGCGTACTGTTTGCCGCCGTTACCGTTCCGTGTTTGCGATCAAACGCCGGGCGCAGCTTTGCGTAATCGGCAAGCGAGGAATTACCGCGAATATTGTTGTCTTCGACAAGCGGTTGTTTATAAGGAGGGATAAAGGCAGTCATCACCTCTTCTTTGAGTTTTCCGTCTGACCATGCCTGAGCGGCACGCTGATGCGAACGGTGCGCTAATGCA > NC_000913/2459308‑2459861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |