| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,312,117 | A→C | 17.8% | G211G (GGT→GGG) | ompC ← | outer membrane porin protein C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,312,117 | 0 | A | C | 17.8% | 122.4 / 4.4 | 51 | G211G (GGT→GGG) | ompC | outer membrane porin protein C |
| Reads supporting (aligned to +/- strand): ref base A (34/6); new base C (2/8); total (36/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.91e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCGTAGGTGTCACCAC > NC_000913/2311887‑2312355 | aaCTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTa > 1:296496/1‑239 (MQ=255) aCTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATa < 1:713842/238‑1 (MQ=255) aCTGAGCAACAGCTGCGAAGTTTTGGGGTTTGTACGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATa < 2:13954/238‑1 (MQ=255) aGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGa > 1:110990/1‑239 (MQ=255) aGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGCTCGCCGTTAACGAAGTAAGCAGCGCAGGTCTGAGCATCAGTACGTTTGTAGCTGGAGATCGCACCAACGATACCGAAACCTTATTAATCATAAGTGa > 2:756692/1‑239 (MQ=255) cAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATa > 1:714831/1‑239 (MQ=255) cAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATa > 1:267185/1‑239 (MQ=255) cTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAAcc > 1:149714/1‑238 (MQ=255) gcgttGTCCGCCAAACCCAGGGAACGTACGCGAGTTGGGTTGTAGGTCG‑GGGTGTACTGAGCA‑CCCAGGTAGATTTTGTTAGCGTCGTATTTCAGACCCCCAGTGTGGTTTTCAGCCCGGTCGCCGTTACCGATGTAAGCAGCGGTTTTCTGAGCATCAGTACGTTGGGAGCTGGAGATCGCCCCCCCGATACCGAACCCTTCGTAATCATAAGGGATAGAACCGCCGAcgccgtcgc < 2:714831/235‑1 (MQ=255) ttCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCAACGATACCGAACCCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTg > 2:636593/1‑239 (MQ=255) cTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCg > 1:291005/1‑239 (MQ=255) gcgcggtttGCGTGGTGGGTGT‑GGGTTTAC‑GAGGACGCCAGTTATATGTTTGTAGGTGCGTATTTGGGCCCACCAGTGTGGGTTTCCTCGCGGTCGCCTTTCCCGGTTTAAGCAGCGGTTTTCTGAGCATCTGTACTTTTGGAGCGGGAATCCCCCCCACCGATCCCAAACCTTTCGTAATCATAAGTAATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCgtt < 2:1092051/232‑1 (MQ=255) ttGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAACCCTTCGTCATCATAAGAGATAGAACCGCCGACGCCGTCGCAGTTTGGACGAAGTGCGTCACGACCGATgttagtt > 2:74571/1‑239 (MQ=255) ttGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTgttagtt > 1:217293/1‑239 (MQ=255) tgaGGTCTGGGGTGTACGGACAA‑GCCAGGTCGATGTTGTGAGTGTCGTATTGCAGACCACCATGGTATTTATCAGCACGGTCGCCGTTACGGTTGAAAGCGGCGGTGTCCTGGCCAGAAGTACGTTGGGGGCTGAAGATCCCCCCACCGTTACCAAAACCTACGTAATCATAAGTGATACATCCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGccc < 2:955696/237‑2 (MQ=255) cT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCAGCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAACAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTaa > 1:127182/1‑239 (MQ=255) cT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGGCAGTTGTTAGTTACGCCACTAGTaa > 1:1062306/1‑239 (MQ=255) ggTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCGGGGTCGCCGTTACCGATGTAAGCAGCGGGGTTCTGAGCATCAGTACGTTTTGAGATGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATACGTGAGAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGAGCGTCACAACCGTTGTTAGTGACGCCACTAGTaaac > 2:783708/1‑237 (MQ=255) gagttgttgtTGGCTTCGTCTTTCAGCCCACCAGTGTGTGTTTCAGCACGTTCGCCGTTCCCGATGTACGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCCCCGATACCGAAACCTTCATAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGc < 2:267185/234‑1 (MQ=255) gttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTa > 1:107202/1‑238 (MQ=255) ttAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACTGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCAGTTTTTAc > 1:786468/1‑238 (MQ=255) gagggaggtATTTCAGACCCGTGGTGTAGTTTGCAGGAGGGGCGCCGTTACGTAGATAAGCAGAGGTTTTCTGCGCATCAGCACGTTTGGAGTGGGAGACCGCACCACCGATCCCGAACCTTGCTTAATCAAAAGGTAAAGATCCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTAccc < 2:358074/232‑1 (MQ=255) gggcttgtATTCAAGCCCACCAGTGTGGGTTGCAGCAGGGTCGCGGTACGCGATGTAAGCGGCGGTGTTCTGAGCATCAGTACTTTGGGAGCGGGAGACCGCCCCACCGATACCGAAACCTTCGAAATCAAAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTAccc < 2:217293/232‑1 (MQ=255) ttgcacaccaccAGTGTGGTTTTCCGCAGGGCGGCGGTTACGGATGTAAGCGGGGGTGTTCTGAGCATCATTAGTTTTGGAGCTGGATACCGCACCCCCGATACCGAATCTTCCGTAATCATATGTGATAGATCCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGaa < 2:459209/233‑1 (MQ=255) accaccAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCaa > 1:502429/1‑239 (MQ=255) caccaGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAg > 1:1063597/1‑239 (MQ=255) ccaGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGt > 1:1118379/1‑238 (MQ=255) gttAGGTTTCAGCCCGGTCGCCGTTCCCGATGTAAGCAGGGGTGTTCTGAGCATAAGTGCGTTTGGAGCGGGAGACCGCACCCCCGATACCAAACCCTTCGTAATCAAAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGc < 2:9581/172‑1 (MQ=255) ttCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGCTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCa > 1:287030/1‑238 (MQ=255) aGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTaaa > 1:9581/1‑174 (MQ=255) aGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTTACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCa > 1:402896/1‑239 (MQ=255) aGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAAcc > 2:104421/1‑238 (MQ=255) aGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCa > 1:896168/1‑239 (MQ=255) gTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCga > 1:625484/1‑239 (MQ=255) gTTCCCGATTTAAGCACGGGTGTTTTGGGAAACAGTATTTTGGGAGCGGAAAATCGCCCCCCCGATACGAAACCCTTCGTAACCAAAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGt < 1:115111/239‑1 (MQ=255) cagcGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGCAGAAGTCAGTGTTACGGTAg > 1:364496/1‑239 (MQ=255) gcgttttCTGAGCATCAGTACTTTGGGAGCTGGAGCCCGCCCCCCCGTTACCAAACCCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCgaa < 2:945673/212‑1 (MQ=255) tttCTGAGCATCAGTACTTTTGGAGCGGGAGATCCCCCCACCGATACCAAACCCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGa < 1:238843/238‑1 (MQ=255) ttCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCACACAGACCGAAGAAGTCAGTGTTACGGTAGGCAGCGaa > 2:820103/1‑239 (MQ=255) ggCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGGTACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTAACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAACAAAGTTCCGGGCGTCAACCAACACGAAGAAGTCCGTGTTACGGTAGGTCCGGACGCCGt > 2:135965/2‑239 (MQ=255) aGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAgtg > 1:945673/1‑217 (MQ=255) aGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGGGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGt > 1:904528/1‑239 (MQ=255) aTCAGTACGTTTGGAGCTGGAAATCGCACCACCGATACCGAAACCTTCGTAATCATAAGAGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGCAAAGCCTTCACCAGATGGGGTGACGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAATCAGACCGAAGAAGCCAGTGTTACGGTCGGGCGCGAAGCCGGTa > 2:1136023/1‑238 (MQ=255) cAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGCCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTAca > 1:692298/1‑237 (MQ=255) tgTTTGGGGCTGGAGACCCCCCCACCGATCCCAAACCCTTCTTAATAAAAAGGTATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACgctg < 1:1136023/238‑1 (MQ=255) tttGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGAAGGTCGCGAAGCCGTTACCACgcg > 2:811520/1‑235 (MQ=255) gCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGa > 2:69971/1‑239 (MQ=255) ggAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGt > 2:74960/1‑239 (MQ=255) caccGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCg > 2:1104614/1‑239 (MQ=255) ccGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTAccc > 2:676165/1‑126 (MQ=255) ccGAAACCTTCGTAATAATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTAccc < 1:676165/126‑1 (MQ=255) aCCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCGTAGGCGTcacca > 1:250168/1‑238 (MQ=255) aCCTTCGTAATAATAGGTGATAGACCCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCGTAGGTGTcaccac < 1:636593/239‑1 (MQ=255) | AACTGGTACTGAGCAACAGCTTCGAAGTTCTGTGCTTTGTTCGCCCAACCCAGGGAACCTACGCGAGTTGCGTTGTAGGTCT‑GGGTGTACTGAGCA‑GCCAGGTAGATGTTGTTAGCGTCGTATTTCAGACCACCAGTGTAGGTTTCAGCACGGTCGCCGTTACCGATGTAAGCAGCGGTGTTCTGAGCATCAGTACGTTTGGAGCTGGAGATCGCACCACCGATACCGAAACCTTCGTAATCATAAGTGATAGAACCGCCGACGCCGTCGCCGTTTTGACGCAGTGCGTCACGACCGTTGTTAGTTACGCCACTAGTAAAGCCTTCACCAGATGGGTTGCCGTTTTTACCCTGGTACTGAACAGCAAAGTTCAGGCCGTCAACCAGACCGAAGAAGTCAGTGTTACGGTAGGTCGCGAAGCCGTTACCACGCTGCTGCATGAAGTTGTCAGAACCGTAGGTGTCACCAC > NC_000913/2311887‑2312355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |