| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,285,877 | C→G | 15.6% | P134A (CCG→GCG) | agaD → | N‑acetylgalactosamine‑specific enzyme IID component of PTS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,285,877 | 0 | C | G | 15.6% | 143.5 / 4.8 | 62 | P134A (CCG→GCG) | agaD | N‑acetylgalactosamine‑specific enzyme IID component of PTS |
| Reads supporting (aligned to +/- strand): ref base C (14/37); new base G (8/2); total (22/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.85e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGGCGATGAAAGATAACCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATACCCACAGCGTTGCG > NC_000913/3285640‑3286107 | gcggcgATGAAAGATAACCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGc < 1:317352/238‑1 (MQ=255) tAACCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTAttttt < 1:416279/237‑1 (MQ=255) tAACCCCGAATTTATTAAAACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTAGTAAGTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTAttttt < 1:984156/237‑1 (MQ=255) aCCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGGATTTGGTCATTATTTTTCAGCCCGGGGAAACTTC‑TGGGGGCGGTTTTTTTTTTTGcc > 1:172346/1‑239 (MQ=255) cGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGttt < 1:157058/239‑1 (MQ=255) aaTTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAAATTTCTCATCGTTTTGCATCCAAGGGAACACGC‑TGGGGGCGGTTCTtttttttttcccttt > 1:199853/1‑229 (MQ=255) acccGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGGATTTGTTTTTCTTTTTCCCTCCCCGGGAAACTGC‑TTGGGGCGGGTTTTTTTTTTTCTGTTTTCCTTCTTTTCtttttt > 2:572863/1‑238 (MQ=255) acccGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAGTTTGTTCATCCTTTGCCACCCAGGGAAACATGC‑TGGGGCCGCTTATCTTTTTTTCCGGTTATCTGCTTATCtttttt > 2:1104478/1‑238 (MQ=255) acccGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATATGCTCCTCCTTTTCCTACCACCGGAACATGC‑TGGGGGCGCTTCTATTTTTTCCCGTTTTGCCTCTTCTCtttttt > 2:335367/1‑238 (MQ=255) cccGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGGATTTGCTTATCTTTTTTCCCCCAGGGAAACCTTC‑TGGGGGCGTTTCTATTTTTTGCCGCTTTTCCGCtttttttttt > 1:453465/1‑237 (MQ=255) cccGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGCGACTTTTTCAACTCTTTCCATTCCGGGGAAACTGC‑TAGGGGCGGTTCTTTTTTTTGTCCTTTATCCGCCTGTCttttttt > 1:238489/1‑237 (MQ=255) aaTCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGGATTTGCTCATCATTTTCTAGCCCTGGGAGCCTGC‑TTGGGGCCCGTGTATTTTTTTCCCTTTTCCTTCTTATCTTTTTTCtccc > 2:597869/1‑236 (MQ=255) aTCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTgcgc < 1:901008/239‑1 (MQ=255) cTGGGCGGATTCCGGATGGGGTTATTAATTGCGATGGAAGAAAAAGGAGAAATCCGCGACACCATTAAAGGCCGAAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGt < 2:450217/239‑1 (MQ=255) tGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCAc < 1:572863/239‑1 (MQ=255) attaATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGTGATTTTCTCATCACTTGCCCGCCCGGGGAACCTGCTTGGGGCCG‑TTCTATTTTTTCCCGTTTAACTCTCTATCTTTTTTCTGCGCGGGGGTGGGAACCACGTCCGTtttt > 1:1084748/1‑239 (MQ=255) ttCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTTCTCATCCTTTTCCAGCCACGGAAACCTGC‑TGGGGCCGGTTCTTTTTTTTGTCGCTTTCCTGCTTATTTTTTTTTTGCGCGCTGGCTGGACCCACGTCGGGTTTTCAGTCg > 1:865003/1‑239 (MQ=255) cGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAAATTGCTCATTATTTTCCCCCCCGGGAAACCTGC‑TTGGGGCGGTTTTATTTTTTGCCGTTTTCCCTCTTATTTTTTTTCTGCGCGTCGGCTGGGCCCCCGCCCGTttttttctcgt > 1:289789/1‑231 (MQ=255) tGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGGAATTGTTCATCCTTTGCCCGCCATGGGAACCCGC‑TGGGGCCGAGTCTATTTTTTGCCGCTTTCCTGCCTTTTTTTTTTCTTCTCGTCGGCTGGGACCACGCCGGTTTTTCTCTTGGCGTg > 1:767665/1‑239 (MQ=255) gaagaaAAAGGCGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGa < 2:126848/238‑1 (MQ=255) aaaaGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGACACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTGCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTCCCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGc < 1:1054598/237‑1 (MQ=255) gaAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATa < 1:668328/238‑1 (MQ=255) tAAAGGCCTCAAAGTGGCTCTGTTTCGCTCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTTCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGTGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGc < 2:664892/239‑1 (MQ=255) aaaGGCCTCAAAGTGGCGCTGTTTGGCCCAATCGCCTGGATTGGCGATGCGATTTTCTGGTTTGCGTTGGTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCa < 2:721168/239‑1 (MQ=255) aaaGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTc < 1:609755/236‑1 (MQ=255) cTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTTCTCATCATTTTTCCGCCCGGGGAACCTGC‑TTGGGCCGATTCTATTTTTTTCCGTTTTTCTGCTTTTCTTTTTTCTTCGCGTCGGCTGGACCCCCCTCGGTTATTCTGTCGGCGTGAAGGCGATCGATAAAATGCGGGAGAACTCGCAgatgat > 1:1023607/1‑239 (MQ=255) aaaGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGc < 1:756322/239‑1 (MQ=255) aGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCAc < 1:119103/175‑1 (MQ=255) gTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCaa < 1:259864/239‑1 (MQ=255) ttGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAAcc < 1:1104478/239‑1 (MQ=255) tgcgatTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGGCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATcggc < 1:446358/238‑1 (MQ=255) tttCTGGTTTACTGTGTTGCCGATTATGGCGGGAATTTGCTCACCATTTGCCGGCCAGTGAAACCTGC‑TGGGGCAGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTGCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTg < 2:453465/238‑1 (MQ=255) ttCTGCTTTACTTGGTTGCCGATTATGGCGGGAATGTGCTTATCATTTCCCAGGCAGGGAACCCTGC‑TGGTGTAGATTCGATTTTTCGCCGTTTACCTGCTTATCTCTTTCCTTCGCGTCGGCTGGACCCACGCCGGTTATTCAGTCGGCGTGAAGGCGATCGATTAAGTGCGAGAGAACTCGCAGATGATTGCGCGTTCGGCAACCATCCGCGAGAACACAGTAATCCGCGGGCTCAt < 2:879544/239‑1 (MQ=255) gtgttttACTTTGTTGCCGATTATGGCGAGAATTTGCTCATCATTTGCCAGCCAGTGAATCCTGC‑TGGGGGCGATTCTATTTTTCGCCGTTTACCTGCGTATCTTTTTCCTGCGCTTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCg < 2:430205/235‑1 (MQ=255) ggTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCt < 1:973120/239‑1 (MQ=255) tttACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCtt < 1:141301/238‑1 (MQ=255) tACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGt < 1:597869/239‑1 (MQ=255) gacttgtgtgCCGTTTATGGCGGAAATGTGCTCATCTTTGGCCAGCCAGGGGAACCTGC‑TTGGGCCGATTCTATTTTTCGCCGTTTTCCTGCTTATCTTTGTCCGGCCCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAAGCGGCGGGCTGAGCGCTGCGt < 2:1083752/231‑1 (MQ=255) cTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGt < 1:1024574/237‑1 (MQ=255) tttGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTAtg < 1:471160/239‑1 (MQ=255) ttgttgCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTAtgt < 1:1015497/239‑1 (MQ=255) tgttgCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTAtgtg < 1:1146835/239‑1 (MQ=255) tgCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCat < 1:1023347/239‑1 (MQ=255) gCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTGCCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCata < 1:992362/239‑1 (MQ=255) cGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATAtt < 1:819912/239‑1 (MQ=255) ttATGGCGGGAATTTGGTCATCATTTGCCAGCCAGGGAACCCTGC‑TGGGGGCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTaa < 2:767665/238‑1 (MQ=255) gggAATTTGCTCATCATTTTCCAGCCAGGGAATCCTGC‑TGGTGCCGATTCTATTTTTCGCAGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCGGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGa < 2:880709/239‑1 (MQ=255) ttGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGt < 1:335367/239‑1 (MQ=255) catcctTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGTCGTGAAGGCGATCGATACAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGTTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTTACTGGGTGACATCTTGTGc > 2:720967/1‑238 (MQ=255) tcatTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCAt < 1:445312/239‑1 (MQ=255) tcatTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCAt < 1:949865/239‑1 (MQ=255) gccagccaGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGAt < 1:566656/191‑1 (MQ=255) gccagccaGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGAt > 2:566656/1‑191 (MQ=255) gccagccaGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCCTATTAACGCGGTGACATCGTTTTCCATcaacaa > 1:701277/1‑239 (MQ=255) cagccagGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAAt < 1:319092/238‑1 (MQ=255) agccagGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATa > 1:333276/1‑238 (MQ=255) agccagGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATa > 1:374297/1‑238 (MQ=255) ccagGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGAc < 1:1147726/232‑1 (MQ=255) ccagGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGAc > 2:1147726/1‑232 (MQ=255) ccagGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATAccc > 1:694073/1‑239 (MQ=255) ccTGC‑TGGGGCCGCTTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTTGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCAGGGTAATCGGCGGGATGATCGCTTCGCTTGTGCATATTATCGTGTGGACATCGGTTGTCCTCGACAATAccccacgccttg > 2:902434/1‑230 (MQ=255) tgc‑tgGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATACCCACAGCGTTgcg < 1:613108/239‑1 (MQ=255) gc‑tgGGGCCGATTGTATTTATCGCCGTTTGCCTGCTTATCTTTTTCCTGCGCGTCCGCTGGACCCACGTCGGTTATTCAGTCGGCGTCAAGGCGATCGATAAAGTGCGAGCGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTAGGGATCTCGGCAATCGGCGGGCTGACTCCTTCGTATGAGAATCTTATCGAGCTGACATCGTGTGCCATCGACAATACCCACAGCGTTgc > 2:366787/1‑237 (MQ=255) | GCGGCGATGAAAGATAACCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGC‑TGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATACCCACAGCGTTGCG > NC_000913/3285640‑3286107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |