BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	55,437	A→C	10.6%	V558G (GTG→GGG)	lptD ←	LPS assembly OM complex LptDE, beta‑barrel component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	55,437	0	A	C	10.6%	411.2 / 4.1	172	V558G (GTG→GGG)	lptD	LPS assembly OM complex LptDE, beta‑barrel component
Reads supporting (aligned to +/- strand): ref base A (96/52); new base C (3/20); total (99/73)
Fisher's exact test for biased strand distribution p-value = 3.84e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 172 total aligned reads displayed.

TCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGC  >  NC_000913/55201‑55671

tCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCAc                                                                                                                                                                                                                                                  <  1:530237/238‑1 (MQ=255)

          aTCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCgg                                                                                                                                                                                                                                <  1:1196646/239‑1 (MQ=255)

          aTCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCgg                                                                                                                                                                                                                                >  2:736063/1‑239 (MQ=255)

                     tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACgg                                                                                                                                                                                                                     >  2:240390/1‑239 (MQ=255)

                     tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACgg                                                                                                                                                                                                                     >  1:295967/1‑239 (MQ=255)

                     tATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTACGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACgg                                                                                                                                                                                                                     >  1:1320546/1‑239 (MQ=255)

                     tATCGTAATGAATCCTGCCACGCAATCCCCAACGCTCGGAGATACGCCAGGAAGCATCGCCTGCCCACACCCGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGAGAGCCTCCGTGAAATGGCAGATTTGACCAACGCAAATATTAAAACGTTCGACGGCAGCATCATAATATATGTGCGATGTGATACCGGTCGTCCTCT‑‑‑‑‑‑‑GGTTAACGGAGGAAATACgg                                                                                                                                                                                                                     >  2:661907/1‑239 (MQ=255)

                            cggAACCCCCCCACGCAATCCCCAACGCGCGGAGATACGCCGTTAAGTATGGCCTGCCCCCACCAGTAAA‑CCCGTTTTGTCGTCATCCTCCCATGTTAGGTTGTCATCGCCAGTGCGAGCCTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAGCGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTGGTCACCT‑‑‑‑‑‑‑GGTTACCGGAGGCAATACGGTCAAGAc                                                                                                                                                                                                              <  2:1082845/237‑1 (MQ=255)

                               aaTCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGAccg                                                                                                                                                                                                            >  1:423341/1‑238 (MQ=255)

                               aaTCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGAccg                                                                                                                                                                                                            >  1:477480/1‑238 (MQ=255)

                               aaTCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGAccg                                                                                                                                                                                                            >  2:957329/1‑238 (MQ=255)

                                    cGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTaa                                                                                                                                                                                                      >  2:140328/1‑239 (MQ=255)

                                      ccACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCAc                                                                                                                                                                                                                                                  >  2:351368/1‑200 (MQ=255)

                                        aCGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTcc                                                                                                                                                                                                  <  1:797352/239‑1 (MQ=255)

                                         cGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCg                                                                                                                                                                                                 >  1:311348/1‑239 (MQ=255)

                                             accccacaCGCCCGGCGATACGCCGGTAAGGATCCCCTGCCCCCGCAAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGCCATCGCCAGTGCGAGACTCCGTGAAAAAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGAACTAACATATATGCGAGATGTGCCCCCGGTCGTCCCCG‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAATACCGCCGTAAGTCCGGTcc                                                                                                                                                                                             <  2:490567/232‑1 (MQ=255)

                                                  cAACTCTGGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCCCCCATGTTATGTTGTCAGCGCCAGTGCGAGACTCCGTAAAATAGTAGATTTGCCCAACGGAAATATTAAACCGTTCAACGCCAGCATAATCATATATGCGAGGTGTGACACCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGAGGAAATACGTTCAAGCCCGCCGTAAGTCCGGTCCCGGaa                                                                                                                                                                                        <  2:204599/239‑1 (MQ=255)

                                                  aaacgtccGGATATAGGCCATGAATTATCGCCTGCCACCACC‑GTGAACCCCGTTTTGTCTTAATCCTCCCAGGTTTTG‑‑GTCACCGCCAGGGCGAGCCTCCGGGAAATAGAAGATTTGACCAAGGAAAATATTAAACCGTCCAACGGCAGCACCATAATATATGGGGGATGTGACACCGGTCGTCACCTGGTTAGCGGTTAGCGGAGGAAATACGGCAAAGACCGCCGTAAGTCCGGTcc                                                                                                                                                                                             <  2:298638/232‑1 (MQ=255)

                                                        tCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGcc                                                                                                                                                                                  >  1:1008646/1‑239 (MQ=255)

                                                          ggAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCag                                                                                                                                                                                >  1:188609/1‑239 (MQ=255)

                                                                 cGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTc                                                                                                                                                                         >  1:1146065/1‑239 (MQ=255)

                                                                      gtaagtaCCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATTTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGAc                                                                                                                                                                                                              <  1:1029926/197‑1 (MQ=255)

                                                                        aagtaTCGCCTCCCCACACCAGTGAA‑CCGTTTTTGTCGTATTTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGAt                                                                                                                                                                     <  2:1387698/236‑1 (MQ=255)

                                                                              cGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCaga                                                                                                                                                            >  1:903448/1‑239 (MQ=255)

                                                                              cGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCaga                                                                                                                                                            >  2:150142/1‑239 (MQ=255)

                                                                                ccTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCgg                                                                                                                                                                                                                                >  1:1432467/1‑169 (MQ=255)

                                                                                ccTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCgg                                                                                                                                                                                                                                <  2:1432467/169‑1 (MQ=255)

                                                                                     ccaacccAGTGAA‑CCCGTTTTTTCGTCATTCTCCCATGTTATGTTTTCATCGCCAGTGCGAGACCCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGt                                                                                                                                                     <  1:377791/234‑1 (MQ=255)

                                                                                     ccACCCCAGCGAA‑CCCGATTTGTATTCTTTCTCCCATGTTATCGTGCCAGCGCCAGTGCGAGACTCCGTGAAATAGTGTATTTGACCAACGGAATTATAAAAACGTTCACCGGCAGCATAATCATATATGCGTAATGTGACACCGGTCGTCACTG‑‑‑‑‑‑‑GGTTATAGGAGGCAAACCGGTAAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGt                                                                                                                                                     <  2:103127/239‑1 (MQ=255)

                                                                                     ccACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATTTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACCCCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGt                                                                                                                                                     <  1:1301554/239‑1 (MQ=255)

                                                                                     ccACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGt                                                                                                                                                     <  1:240390/239‑1 (MQ=255)

                                                                                     ccACACCAGTGAA‑CCATTTTTTTCTTCTTTCTCCCATGTTTTGTTGTAATCGCAAGTGGCAGACCCCTTGAAATAGTGAGTTTGACCACGGAAAATATTAAAACGTTCATCGCCACCATCATCATATATGCGGGATGTGACCCCGGTCGCCCCCT‑‑‑‑‑‑‑GGTGAGCGGAGACAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGt                                                                                                                                                     <  2:187863/239‑1 (MQ=255)

                                                                                       atcccAGTGAC‑CCCGTTTTGTCGTCTTTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAAGGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGGGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCg                                                                                                                                                   <  1:800417/236‑1 (MQ=255)

                                                                                                   cccGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTAACCAACGGAAATATTAAAACGTTCACCGGCAGCATCATCATAAATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGCGGCAATACGGTAAAGACCGCCGTAAGACCGGTCCCGGAACAGGCCAGAGTGGTAAGATTGCAGCAGAGAGGAGTCGACGGTATAGAt                                                                                                                                        >  2:546059/1‑239 (MQ=255)

                                                                                                        tttGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTc                                                                                                                                     >  2:233669/1‑237 (MQ=255)

                                                                                                            tcgtcATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGGCTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGCGTCGTa                                                                                                                                                 >  1:91756/1‑221 (MQ=255)

                                                                                                              gtcATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGa                                                                                                                              >  2:357200/1‑238 (MQ=255)

                                                                                                              gtcATTCCCCCGTTTTATTTGGTCACCGCCGGTGGGAGACCAGTTGAAATAGTAGATTTGACAAACGGAAATATTAAAACGTTCAACGGCAGCATCATAATATATGCGGGAGGTGACACCGGCCGTCACCT‑‑‑‑‑‑‑GTTTGGGGGAGACAATACGCTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGAt                                                                                                                             <  2:903448/239‑1 (MQ=255)

                                                                                                                cATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATc                                                                                                                            >  1:186843/1‑238 (MQ=255)

                                                                                                                cATTCTCCCATGTTATGTTGTCATCCCCATGGCGAGACTCCGTAAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCACCGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATcg                                                                                                                           <  1:657410/239‑1 (MQ=255)

                                                                                                                    ctcCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGAt                                                                                                                       >  2:704127/1‑239 (MQ=255)

                                                                                                                     tcCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGGGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATa                                                                                                                      <  1:382549/239‑1 (MQ=255)

                                                                                                                          tgttatgttGTCATCGCCGGTGCGAGACTACGTGAAATAGTAGATTTGACCAAGGGAAATATTAAAACGTTAAACGGCGGCACCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  1:228704/239‑1 (MQ=255)

                                                                                                                          tgttatgttGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  1:1252413/239‑1 (MQ=255)

                                                                                                                          tgttatgttGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGCCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  1:769633/239‑1 (MQ=255)

                                                                                                                          tgttatgttGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCTGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  2:124593/239‑1 (MQ=255)

                                                                                                                          tgttatgttGTCACCGCCAGGGCGACGTTCCGGAAAATAGTAGATTTGACCAACGGAAATATTAAACCGTTCAACGGCAGCATCATCATATATGCGAGATGTGACCCCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGGGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  2:1322649/239‑1 (MQ=255)

                                                                                                                          tgttatgttGCCACCGCCAGTGCGAGACTCCGTGAAATAGTAAATTTAACCAACGGAAATATTAAAACGTTCAACGGCAGCATAATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  1:69744/239‑1 (MQ=255)

                                                                                                                          tgttatgttGCCACCGCCAGGGCGAGACTCCGTGAAATAGTAAATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATAATATATGCGAGATGTGACCCCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGGGGCATTACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  2:911834/239‑1 (MQ=255)

                                                                                                                               tgttgtCATCGCCCGTGCGAGTCTCCGTGAGATAGTAGATTTGACCAACGGAACTATTAAGACGTTCAACAGCAGCCTCATCCTATATGCGAGATGTGACACAGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGGCAATACCGCCGTAAGTCCCGACCCTGCACCGGCCAGAGTAGCCACCATGCAGCGAACTCGATGCCTAGTTAAAGATGTCGCACTCATCGCTCTACGGCACGTaa                                                                                                            >  2:590673/1‑238 (MQ=255)

                                                                                                                               tgttgtCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTcc                                                                                                                                                                                             >  2:943795/1‑158 (MQ=255)

                                                                                                                                    tCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAGCGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACACGCCAGAGTAGTCAGATTGCCGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAAt                                                                                                        >  2:655834/1‑238 (MQ=255)

                                                                                                                                    tCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATa                                                                                                                      >  1:92743/1‑224 (MQ=255)

                                                                                                                                    tCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGGCGCTCTGATCGCGATACGGCACGTACAAAt                                                                                                        >  1:782774/1‑238 (MQ=255)

                                                                                                                                    ccATCGCCAGTGCGAGCCTCCGTGAAATAGTAGATTTGACCACCGAAAAAATTAAAACGTTCAACGCCAGCAACCTCATATATGCGAGATGTGCCCCCGGTCGTCCCCG‑‑‑‑‑‑‑GGTTAGCGGAGGAAATACGGTAAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTtat                                                                                                                                            <  2:1213302/201‑1 (MQ=255)

                                                                                                                                      aTCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAAt                                                                                                        >  2:447078/1‑236 (MQ=255)

                                                                                                                                      aTCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGCAAGTCCGGTCCCGGAACAGGCCCGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGGTATAGCTGTAGCTCTGATCGCGCTACGGCACGTAAAAAt                                                                                                        >  2:805889/1‑236 (MQ=255)

                                                                                                                                         gCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTgc                                                                                                   >  1:392984/1‑238 (MQ=255)

                                                                                                                                              tGCGAGACTCCGTGAAATAGTAGATTTGACCTACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCCATACGGTCAAGAGCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGGCGCTCCGATCGCGATACGGCACGTACAGATACTgcgcgcgc                                                                                             >  2:428920/1‑239 (MQ=255)

                                                                                                                                              tGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGct                                                                                                                                  >  1:1213302/1‑202 (MQ=255)

                                                                                                                                              tGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGACCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATATGGTACGTACAAATa                                                                                                       >  1:935173/1‑229 (MQ=255)

                                                                                                                                                    aCTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTcc                                                                                       >  1:1212563/1‑239 (MQ=255)

                                                                                                                                                        cGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATa                                                                                                       >  1:924166/1‑219 (MQ=255)

                                                                                                                                                         gTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGt                                                                                  >  1:73081/1‑239 (MQ=255)

                                                                                                                                                           gaaatattgtttttGACCAGAGGAAATATAAAAACGTTCAACGGCAGAATCATCATATATGCGAGATGTGACACCGGTCGTCCCTT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATAGGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGtt                                                                                 <  2:1175239/227‑1 (MQ=255)

                                                                                                                                                           gAAATATTAGATGTGACCACAGGAAAAATGACAGCGTTACACTGCAGCAGCATATTTTGTGCGGGAGGTGCGACGGGTCGTCCCTG‑‑‑‑‑‑‑GGTCAGCGGAGCCATTGCGGGCACGCCCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGGCGTAGTTATAGATGTCGCTCTGAGCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGtt                                                                                 <  2:477480/238‑1 (MQ=255)

                                                                                                                                                               tagtagATTTGACCAACGGAAATATTAAACCGTTCAACGGACGCATCAACATATAGGCGGGATGTGACCCCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGTTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGt                                                                            <  1:747111/239‑1 (MQ=255)

                                                                                                                                                                agtagATTTGACCAAGGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGAc                                                                                                                                                                                                              <  2:25977/108‑1 (MQ=255)

                                                                                                                                                                agtagATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGAc                                                                                                                                                                                                              >  1:25977/1‑108 (MQ=255)

                                                                                                                                                                agtagATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGta                                                                           >  2:1012590/1‑239 (MQ=255)

                                                                                                                                                                  tagATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCAc                                                                                                                                                                                                                                                  <  1:13605/77‑1 (MQ=255)

                                                                                                                                                                   agATTTGACAAAGGGAAAAATTAACGCGTTCACCGCCAGCATGATCATTTATGCGAAATTGCACCCGGGCCGTCCCTT‑‑‑‑‑‑‑GGTTAGCGGGGCAAATCCGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGtat                                                                          <  2:802007/237‑1 (MQ=255)

                                                                                                                                                                           ccAACGGAAATATTAAAACGTTCAGCGGCAGCATCATCATATAGGCGAGATGTGACACCGGTCGTCCCCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGc                                                                <  1:284042/239‑1 (MQ=255)

                                                                                                                                                                            cAACGGAAATAATAAAACGGTCAAGGGCGGCATCATCAGAGAGGCGAGATGGCAGACCGGGCGCCACGT‑‑‑‑‑‑‑GGTGGGCGGAGGCAATACGTTCATGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGcc                                                               <  2:782774/239‑1 (MQ=255)

                                                                                                                                                                              aCGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAg                                                             <  1:233669/239‑1 (MQ=255)

                                                                                                                                                                              aCGAAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAg                                                             <  1:447078/239‑1 (MQ=255)

                                                                                                                                                                                ggAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGCTATAACCCGGAGCCAGCa                                                           <  1:150142/239‑1 (MQ=255)

                                                                                                                                                                                  aaaTATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCa                                                           <  1:357200/237‑1 (MQ=255)

                                                                                                                                                                                         aaaaCGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCata                                                   >  1:50751/1‑238 (MQ=255)

                                                                                                                                                                                          aaaCGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATa                                                                                                       >  1:297809/1‑185 (MQ=255)

                                                                                                                                                                                           agctttCAACGGCAGCATCATCATATATGCGAGATGGCACCCCGGTCGTCACCG‑‑‑‑‑‑‑GGTTAGCGGAGGAAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATcg                                                <  2:423341/235‑1 (MQ=255)

                                                                                                                                                                                                tCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATa                                                                                                       >  1:776775/1‑179 (MQ=255)

                                                                                                                                                                                                          catcatcatATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCAtt                                 >  1:444398/1‑239 (MQ=255)

                                                                                                                                                                                                                     atGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCa                                                                                                                 <  1:560772/148‑1 (MQ=255)

                                                                                                                                                                                                                         gagaTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTg                  >  2:1039978/1‑239 (MQ=255)

                                                                                                                                                                                                                          agaTGTGACTCTGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGCGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAAGACTGAGCGCGCGGTTCCAGTGTTTGGGCATAACCCGGAGCCAGCATTTCCATATCGCGTTCTACGACCATTTTGCCGTCGACTTTGa                 >  2:858617/1‑239 (MQ=255)

                                                                                                                                                                                                                          agaTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGa                 >  1:456190/1‑239 (MQ=255)

                                                                                                                                                                                                                           gaTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGaa                >  1:962458/1‑239 (MQ=255)

                                                                                                                                                                                                                           gaTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACCGCACGTCCAAATACTGCGCGTGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCCTATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGaa                >  2:211221/1‑239 (MQ=255)

                                                                                                                                                                                                                           gaTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGAAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACg                                                                                                               >  2:75899/1‑144 (MQ=255)

                                                                                                                                                                                                                           gaTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGAAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACg                                                                                                               <  1:75899/144‑1 (MQ=255)

                                                                                                                                                                                                                            aTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAAt               >  2:406495/1‑239 (MQ=255)

                                                                                                                                                                                                                            aTGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTCAAt               >  1:817090/1‑239 (MQ=255)

                                                                                                                                                                                                                                       gtcgtcACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGc                                                                <  2:461655/179‑1 (MQ=255)

                                                                                                                                                                                                                                       gtcgtcACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGc                                                                >  1:461655/1‑179 (MQ=255)

                                                                                                                                                                                                                                       gtcgtcACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTAc    >  2:579546/1‑239 (MQ=255)

                                                                                                                                                                                                                                       gtcgtcACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTAc    >  1:1391915/1‑239 (MQ=255)

                                                                                                                                                                                                                                       gtcgtcACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTCGAATTGCGGCATTAc    >  1:938471/1‑239 (MQ=255)

                                                                                                                                                                                                                                         cgtcACCT‑‑‑‑‑‑‑GGTTAGCGGGGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTAcg   <  1:140328/238‑1 (MQ=255)

                                                                                                                                                                                                                                         cgtcACCG‑‑‑‑‑‑‑GGTGAGCGAAGGCAATAGGTTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTAcgc  <  1:531244/239‑1 (MQ=255)

TCGCTACGTTATCCAGACGTGTATCGTACTGAATCCCGCCACGCAATCCCCAACGCTCGGAGATACGCCAGTAAGTATCGCCTGCCCACACCAGTGAA‑CCCGTTTTGTCGTCATTCTCCCATGTTATGTTGTCATCGCCAGTGCGAGACTCCGTGAAATAGTAGATTTGACCAACGGAAATATTAAAACGTTCAACGGCAGCATCATCATATATGCGAGATGTGACACCGGTCGTCACCT‑‑‑‑‑‑‑GGTTAGCGGAGGCAATACGGTCAAGACCGCCGTAAGTCCGGTCCCGGAACAGGCCAGAGTAGTCAGATTGCAGCAGAGACGAGTCGTAGTTATAGATGTCGCTCTGATCGCGATACGGCACGTACAAATACTGCGCGCGCGGTTCCAGCGTTTGGGTATAACCCGGAGCCAGCATTTCCATATCGCGTTCAAAGACCATTTTGCCGTCAACTTTGAATTGCGGCATTACGC  >  NC_000913/55201‑55671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`