Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 357,819 G→C 22.1% A291G (GCG→GGG)  cynR ← transcriptional activator of cyn operon; autorepressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913357,8190GC22.1% 55.1 / 3.0 33A291G (GCG→GGG) cynRtranscriptional activator of cyn operon; autorepressor
Reads supporting (aligned to +/- strand):  ref base G (15/10);  new base C (4/3);  total (20/13)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGACCACCTGT  >  NC_000913/357581‑358046
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                     
gtgtCAGCGGCTACCGTGCTTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTGCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACGGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACcg                                                                                                                                                                                                                                       <  1:1395457/239‑1 (MQ=255)
 tcgcacggtcTACCGTAATTCAACCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACcg                                                                                                                                                                                                                                       <  2:342382/229‑1 (MQ=255)
 ggccAGCGGCTACCCTGCTGCATCCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACcg                                                                                                                                                                                                                                       <  2:1319199/235‑1 (MQ=255)
   tCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACcgcg                                                                                                                                                                                                                                     >  1:868183/1‑238 (MQ=255)
      gCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACTCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAACGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGGGATTCATTTCCGCCAACAACCGCGCAtt                                                                                                                                                                                                                                 >  1:760715/1‑239 (MQ=255)
      gCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTACAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCCGACCTGTGGCAGCGG‑CCACCGGGATTCATTTTCGCCCACAACcgcacctt                                                                                                                                                                                                                                 >  2:337930/1‑234 (MQ=21)
        ggCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCAt                                                                                                                                                                                                                                  <  1:234157/236‑1 (MQ=255)
        ggCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCAt                                                                                                                                                                                                                                  <  1:871918/236‑1 (MQ=255)
                       ttcCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCCGACCTGTGGCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCAAGTGc                                                                                                                                                                                                                >  1:559815/1‑239 (MQ=255)
                           cGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATCAGCGTAGCGCATCAGGGAATTCCAGCCGCAGACCTGTGAAAGCGG‑CTACCGTGATTCAATTCCGCCAAACACCCCGCATTTATCCAACGCCATCTGCaaaa                                                                                                                                                                                                            >  1:1343726/1‑239 (MQ=21)
                            gCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGGGATTCATTTCCCCCAACAACCGCGCATTTTTCCCACGCCCTGTGCaaaaa                                                                                                                                                                                                           >  1:330663/1‑239 (MQ=255)
                                    ccGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCCTATCCCGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGCTTCCTTTCCGCCAACACCCCCGCATTTTTCCAACGCCATGTGCAAAAATGCCCTc                                                                                                                                                                                                    >  2:144315/1‑238 (MQ=18)
                                    ccGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCCGCGTGCACCCCTTATCCGGCCTACGTAGAGCCCTGAACTCGTAGGCCTGGTAAGCGTAGCGCCTCAGGCAATTCCCGCCGCAGACCTGTGTCAGCGG‑CTACCGGGATTCATTTCCGCCAACAACCCCCCATTTATCCAACGCCATGTGCAAAAATGCCTTc                                                                                                                                                                                                    >  1:180845/1‑238 (MQ=255)
                                        gcATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCgc‑ggc                                                                                                                                                                                              <  1:570322/239‑1 (MQ=255)
                                                   aCGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGcc                                                                                                                                                                                   <  2:847998/239‑1 (MQ=255)
                                                        aTGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCCGCCGCAGACCTGGGTCAGCGG‑CTACCGTGATTCATTTCCGCCAAACACCCCGCATTTTTCCCACGCCATCTGCAAACAAGCCTTCGC‑CGCGGCCTTCTGCCCGCTa                                                                                                                                                                              >  2:490813/1‑239 (MQ=17)
                                                        aTGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTa                                                                                                                                                                              >  1:1086005/1‑239 (MQ=255)
                                                        aTGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTa                                                                                                                                                                              >  1:1224910/1‑239 (MQ=255)
                                                        aTGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGGTATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGGGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTa                                                                                                                                                                              >  1:957857/1‑239 (MQ=255)
                                                        aTGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCCGCCGTCTGCCAga                                                                                                                                                                                >  2:1148276/1‑236 (MQ=255)
                                                              aaaaaTGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCCTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCCCCAAACACCACGCATTTATCCCAACCCATGTGCCAAAATGACTTCCC‑GGCGGCTGGCCTCCCTCTAtttttt                                                                                                                                                                        >  2:858753/1‑238 (MQ=17)
                                                                     ccTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCCGCTATTTTTCCGCCGca                                                                                                                                                                 >  1:339700/1‑239 (MQ=255)
                                                                     ccTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAAAGCCTTCGC‑GGCGGCTGTCTGCCAGCCATTTTTCctccgcc                                                                                                                                                                 >  2:1008839/1‑238 (MQ=255)
                                                                          gCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTTCGTAGAGCACTGCACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCCTGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCCATTTTTCCGCCGCCACaaa                                                                                                                                                            >  1:927026/1‑239 (MQ=255)
                                                                          gCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGCGCTTCATTTCCGCCAAAAACCGCGCATTTCTCCAACGCCATGTGACAAAATGCCTTCCC‑CCGGGCTGGCTGCCCGCTCTTTTTCCCGCGCAACcaa                                                                                                                                                            >  2:1356996/1‑239 (MQ=14)
                                                                                                      tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGGTCTCTCCAGTAGTGGCgg‑gg                                                                                                                               >  1:790784/1‑239 (MQ=255)
                                                                                                           gATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCCGTAGTGGCgg‑ggggacg                                                                                                                          >  1:595315/1‑234 (MQ=255)
                                                                                                                                             agCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGcc                                                                                                                                                                                   <  1:207971/149‑1 (MQ=255)
                                                                                                                                             agCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGcc                                                                                                                                                                                   >  2:207971/1‑149 (MQ=255)
                                                                                                                                                  tGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGGCGGCAAGGGAAAAAGCATTAAACCCGCCTcgttgttgtgacacaa                                                                                     >  1:335984/1‑228 (MQ=18)
                                                                                                                                                                                                   agccttgtgcAGCGGCCTACGGTTATTCTTTCCCCCCAACACCCCCCCTTTTACCCACCGCCATGTCAAAAATTGCCTCCGC‑GGCGGTTGTCGCCAAGTTATTTTCCCGCCCCAAAAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAAc                                    <  1:1168698/229‑1 (MQ=255)
                                                                                                                                                                                                                            ttCATCCCCGCCACCACCCCCGCTTTTACCCACCGCCTGGTGAAAAAATGCTTCCGG‑GGCGGCTGTCTGCCACCTTTTTTCCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGa          <  1:778285/239‑1 (MQ=255)
                                                                                                                                                                                                                             tCATTTCCCCCAACACCCGCGCTTTTACCCAACGCCATGTGAAAAAATGCCTTCGC‑GGCGCCTTTCTGCCATCTTTTTTCCCCCCGAAAAAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGac         <  1:1008839/239‑1 (MQ=255)
                                                                                                                                                                                                                             cactccccGCCAACACCCGCTCTTTTCCCCAACGACATGTACAAATAGGCCTTCGC‑GGGGCCTCTCTGCCAGTTATTTTCCCCCCACAGCAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGac         <  1:745385/233‑1 (MQ=255)
                                                                                                                                                                                                                                 cccccccAACAACCGCGCATTTACCCACCGCAGTGTGCAAAAATGCTTCCGG‑GGGGGTTGTCGCCCAGTTTTTTTCCCGCCGCAAAAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGaccacc     <  1:1196506/234‑1 (MQ=255)
                                                                                                                                                                                                                                  ccccccAACACCCCCTCA‑TTATCCAACCCCATGGGAAAAAAACCCCCCGCGGGGGGCTGTCTGCCGGTTTTTTTCCCCCCGAAAAAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGACCACCt    <  1:41922/235‑1 (MQ=255)
                                                                                                                                                                                                                                    cGCCAACCACCGCTCATTTACCCACGCCCGTGTGCAAAAATGCCTTGGC‑GGCGTCTGCCTGCCAGTTTTTTTCCCGCCACAACAAACCCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGACCACCtgt  <  1:858753/239‑1 (MQ=255)
                                                                                                                                                                                                                                    cGCCAACACCCGCCCATTTCCCCACCCCAATGTGCAAAAATGCCTCCGG‑GGCGGCTGTCTGCCATATTTTTTCCCGCCGAAAAAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGACCACCtgt  <  1:1148276/239‑1 (MQ=255)
                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                     
GTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGACCTGTGTCAGCGG‑CTACCGTGATTCATTTCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCGC‑GGCGGCTGTCTGCCAGCTATTTTTCCGCCGCAACAAAACCGCCGTTCTCTCCAGTAGTGGCGG‑GGCAAGAGAAATAGCTTTAAGCCCGTCATGTTGTGTGGCAATCGCTGCTGGTAACAATGTGGAAAGGGAAGTGCGGCGAATCAGCTCCAGAACCGCGCTAATTGAGTTCGCCTCAATGACCACCTGT  >  NC_000913/357581‑358046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑