Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 249,538 T→G 18.0% pseudogene (533/1713 nt) lfhA ← pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913249,5380TG18.0% 217.4 / 9.0 120pseudogene (533/1713 nt)lfhApseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis
Reads supporting (aligned to +/- strand):  ref base T (41/49);  new base G (16/11);  total (60/60)
Fisher's exact test for biased strand distribution p-value = 2.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 121 total aligned reads displayed.

CTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGT  >  NC_000913/249300‑249772
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                            
  gggTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGTGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTg                                                                                                                                                                                                                                             <  2:882936/238‑1 (MQ=255)
   ggTGAGCGGGTTACCCTGTGCTTGGCCCACCAGCGCCACCAGTTGGTAACCGAGGCTTAAACGGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCGGCTGCTCGCGGGTTGCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGc                                                                                                                                                                                                                                            <  2:648611/238‑1 (MQ=255)
    gTGAGCGGGTTCCCCTGTCGTTTGCCCCCCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGAGAGGCTCGATCAGCGGAATGGTTTCCCAACTGCCCTGCTGCTTGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCg                                                                                                                                                                                                                                           <  2:1262884/238‑1 (MQ=255)
    gTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAACCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCg                                                                                                                                                                                                                                           <  1:366178/238‑1 (MQ=255)
       ggCGGGTTACCCTTTTTTTTGTCCACCAGCGCCACCAGTTTGAAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGGGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCa                                                                                                                                                                                                                                        <  2:1105267/237‑1 (MQ=255)
       aGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTCAAACCAAGCAGGGCGCTGACCAGCAACAACGGCAGGGGCGGGAt                                                                                                                                                                                                                                       >  1:648611/1‑239 (MQ=255)
       aGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCAt                                                                                                                                                                                                                                       >  1:565469/1‑239 (MQ=255)
          gggTTCCCCTGTGCTTTGTCCACCAGCGCCCCCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAGTGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTc                                                                                                                                                                                                                                    <  2:1144767/238‑1 (MQ=255)
             ttACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCgg                                                                                                                                                                                                                                >  1:510434/1‑239 (MQ=255)
              tACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGt                                                                                                                                                                                                                               >  1:283826/1‑239 (MQ=255)
               aCCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGt                                                                                                                                                                                                                               >  1:779612/1‑238 (MQ=255)
                     tgCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTaccacc                                                                                                                                                                                                                         >  1:1033118/1‑238 (MQ=255)
                      gCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCg                                                                                                                                                                                                                        >  1:1352686/1‑238 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTACAACCAAGCAGGGCGCTGAACAGCAAAAACGGCCGGGGCGGCATTCCCGGTACCCCCAcccg                                                                                                                                                                                                                    >  2:255126/1‑236 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCGGGAGCGGCGTTTCCGGGCCCTCCCCCAg                                                                                                                                                                                                                    >  2:462262/1‑238 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGGGGCATTCCCGGTACCACCGCCAg                                                                                                                                                                                                                    >  1:1068139/1‑238 (MQ=255)
                          tGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGc                                                                                                                                                                                                                   <  1:222814/239‑1 (MQ=255)
                           gTCCCCCAGCGCCACGAGTTGTAAACGGAGGCTAAAGTGGATAGGCTGGATCGGCGAAATGTTTGCCCACTTGTCTTGCTGTTCGCGGGTTGCGGGGATGGTGCGGGTCCGGTTTTCGGGGCTTTTCTCTCCCGCCTCCGCCGCAAGCGGCTGTTTGCTCACCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCa                                                                                                                                                                                                                  <  2:752126/239‑1 (MQ=255)
                           gTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCACTCCCCGTACCACCGcccgg                                                                                                                                                                                                                   >  2:1302932/1‑235 (MQ=255)
                            tCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACGGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGc                                                                                                                                                                                                                                            <  2:521473/213‑1 (MQ=255)
                             cccccggggcCCCCAGTTTGTAACGGGGGCTTAAACTGGTGGGCTGCATCGGGGGATTGGTTCCCCACCTGCCCTGCTGCTCGCTGGTTTGGGTGATGGTGCGGTTCAGCGTTTCGGGGCTTTTCTCTTCCGCCTCCGCCGCCGGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCAc                                                                                                                                                                                                                 <  2:860382/230‑1 (MQ=255)
                             ccaccaGCGCACCCAGTTTGTACCGGAGGCTTAATGTGATAGGCTGGATCGGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTGGGTGATGGGGCGGGTCAGCGTTTCGAGGCTTTTCCCTCCCCCCCCCGCCGCCAGCGGCTTTTTGCTCACCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACg                                                                                                                                                                                                                <  2:708897/239‑1 (MQ=255)
                                    cgcCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCCGGACCACCGCCAGCACGAACATaa                                                                                                                                                                                                        >  1:752126/1‑239 (MQ=255)
                                    cgcCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTCCCGGGACCACCGCCAGCCCGAACATaa                                                                                                                                                                                                        >  1:205387/1‑239 (MQ=255)
                                          caGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCAAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCgg                                                                                                                                                                                                  <  1:198366/239‑1 (MQ=255)
                                             tttGTAACGGAGTTTTAAACGGAGAGGCGCGATCGGGGGATTGGTTCCCCACCGGCCCTGCTGCTCGCTGTTGCGGGGGATGGGCGGGGTCGCGTTTCCGAGGCTTTCCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCACCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTgg                                                                                                                                                                                               <  2:1064340/239‑1 (MQ=255)
                                               tGTAACCGAGGATTAAACTGTTGGGCTCGATGAGCGGAATGGTTTCCAAACTGCCCTGCTGTTCGCTGGTTTCGGGGAGGGTGCGGGTCAGCGTTTCGAGCCTTTTCTCTCCCGCCGCCGCCGCCGGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCg                                                                                                                                                                                             <  2:954950/239‑1 (MQ=255)
                                                gTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCCCTCCCGGTACCACCGCCAACACGAACCTAAATCCCGGGGCgg                                                                                                                                                                                            >  2:763660/1‑239 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTcc                                                                                                                                                                                                                                   <  1:1314580/194‑1 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGGaggg                                                                                                                                                                                     >  1:983641/1‑237 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTcc                                                                                                                                                                                                                                   >  2:1314580/1‑194 (MQ=255)
                                                       aGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCAATCCCGCTAACACCGACAGCACGAACATAATTCCGGGGGCggggaagg                                                                                                                                                                                      >  2:777522/1‑232 (MQ=255)
                                                              aaCTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGCGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCCATCCCCGTACCACCGGCAGCCCGAACCGAAACCCCGTGGCGgtgctgcacatctc                                                                                                                                                                               >  2:718848/1‑227 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCt                                                                                                                                                                         >  1:9699/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGGAGAGCACCGACGGGCt                                                                                                                                                                         >  1:1227838/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCCGTGGCGGGGGAGAGCACCGACGGGCt                                                                                                                                                                         >  1:785076/1‑239 (MQ=255)
                                                                   aTAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGGCCCACCGCCAGCACGACCATCATCCCGGGGGCGGGGGTGAGAACAGACAGGCt                                                                                                                                                                         >  2:1229262/1‑239 (MQ=255)
                                                                             tCAGCGGAATGGTTTCCCAACTGCCCTGCTGCTCGCTGGTTTCGGTGATGGGGCGGGTCAGCTTTTCGAGGCTTTTCTCTCCCGCCTCCGCCGCCAGGGGCTGTTTGCTCACCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCagcagc                                                                                                                                                               <  1:1302932/239‑1 (MQ=255)
                                                                             tCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCCCCAGCACGAAAACAAAACCCGTGGCGGTGTGGAGCACCCCCGGGCCTGCccgcag                                                                                                                                                                >  2:857453/1‑238 (MQ=255)
                                                                             gcAGCGGAATGGTTCCCCAACTGCCCGGCTGCTGTCTGGTTGCGGTGATGGTGGGTGTAGCTTTTTCGAGGCTTTTCTCTCCCGCCCCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAACCCAAGCAGGGCTCGGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCcagcag                                                                                                                                                                <  2:1352858/237‑1 (MQ=255)
                                                                                  ggAATGGTTTCCCAACTGCCCTCCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCGGCGTTCCGAGGCTTTTCTCTCCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGt                                                                                                                                                           <  1:432543/238‑1 (MQ=255)
                                                                                     aggttttCCCAACGGACCTGCGCCCCGCTGGTTTCGGGGTGGGGGCGGGTAAGCTGTTCGAGGCTTTGCTCTCCCGCCTCCGCCGCGAGCGGGGGTTGCCTCACCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACg                                                                                                                                                       <  2:94857/235‑1 (MQ=255)
                                                                                           tCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTc                                                                                                                                                 <  1:280437/239‑1 (MQ=255)
                                                                                                aCTGCCCTGCTGTCCGTTGTTTTCGGGAGGGGTGGGGTTCGGCGTTCCGAGGCTTTTCTCTCCCGCCCCCCCCGCCAGGGTCTTTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTCCCGGTCCCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATggg                                                                                                                                            <  2:1191767/239‑1 (MQ=255)
                                                                                                    gccTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTAAGCTTTTCGAGGCTTTTCTCTGCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGa                                                                                                                                         <  1:157441/237‑1 (MQ=255)
                                                                                                       tgctgcTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGCCGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATc                                                                                                                                     >  1:1191767/1‑239 (MQ=255)
                                                                                                         ctgctCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGCTATCg                                                                                                                                    >  1:318485/1‑238 (MQ=255)
                                                                                                                 tGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAGCATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGCTATCGCCGTTGTc                                                                                                                            >  1:743703/1‑238 (MQ=255)
                                                                                                                   gTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCCCGTCATGGGCGATATCGCCGTTGTc                                                                                                                            >  1:1116721/1‑236 (MQ=255)
                                                                                                                   gTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGGGGGGGGGTAGAGCACCGACGGGCTTGCCCGCCGATGGTTCAGCACGGCAGTGGCGATATCGccctgttgcc                                                                                                                          >  2:605673/1‑230 (MQ=255)
                                                                                                                   gTTTCGGCGATGGTGCGGGTCAGCGCTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACAGCAGGTGCGGCATTCCCCGTACCACCGCCAGCACCGACAAAAAACCGGCAGAGGTGTAGAGCACCAGCGGGCCTGCCAGCAGCTGGTTATGCACGTCATCGGCGCTAACTCGGTTGTCGcc                                                                                                                         >  2:1036758/1‑238 (MQ=255)
                                                                                                                       cGGTGATGGGGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGAcg                                                                                                                     <  1:200227/239‑1 (MQ=255)
                                                                                                                       cGGTGAGGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGAcg                                                                                                                     <  1:496166/239‑1 (MQ=255)
                                                                                                                           gATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCCTTCCCGGTACCACCGCCAGCACGAACATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTAGCCAGCCGCTGGGTACGCACGTCATGGGGGAAATCCCCGGTGTCGCTGACGCggg                                                                                                                 >  2:36958/1‑239 (MQ=255)
                                                                                                                            agggTGCGGGTCAGCTTTTCGGGGCTTTTCCCTCCCGCCCCCGCCGCCGGCGGCTTTTTGCTCTCCCGCCCGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCggg                                                                                                                 <  2:1000023/236‑1 (MQ=255)
                                                                                                                              ggTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGGGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTg                                                                                                               >  1:844624/1‑238 (MQ=255)
                                                                                                                                  cGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCCGTGGCGGTGTAGAGCACCGACGGGCCTGCCAGCCGCTGGTTACGCACGTCATGGGGGATATCGCCCGTGTCCCGGACCGGGGGGACGa                                                                                                           >  2:242276/1‑238 (MQ=255)
                                                                                                                                    ggTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATCGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATaa                                                                                                        >  1:385639/1‑239 (MQ=255)
                                                                                                                                    ggTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCCCCGTTGTCGCTGACGCGGGTGACGATaa                                                                                                        >  1:694868/1‑239 (MQ=255)
                                                                                                                                         gCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCCAAGGGCTTGCCAGCCGCTGGTTACGCACGGCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAAt                                                                                                       >  1:1000023/1‑235 (MQ=255)
                                                                                                                                         gCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGAGCGGCATTCCCGGTACCACCCCCAGCACGTACATAATCCCGGTGGCGGGGTAGCGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGCCATGGGCGCTATCGCCGTTGTCGCTGCCGCGGGGGACGATAACcgc                                                                                                    >  1:369558/1‑238 (MQ=255)
                                                                                                                                            gTTTGGAGGCTGTTCTCTCCCGCCTCGGCCACCGCGGGCTTTTGGCCCACCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGGGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgc                                                                                                    <  2:905544/236‑1 (MQ=255)
                                                                                                                                              ttCGAGGCTTTTCCCTCCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACAGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATcgccgccg                                                                                               <  1:1243422/239‑1 (MQ=255)
                                                                                                                                               tCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATcgccgccgc                                                                                              >  1:775220/1‑239 (MQ=255)
                                                                                                                                                   aGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGGTATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCggg                                                                                           >  1:355746/1‑238 (MQ=255)
                                                                                                                                                         ttCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCCCCGCCCGCCCGAACCTAATCCCGGTGGCGGGGTAGAGGACCGACGGGCTTGCCACCAGCTGGTTACGCACGTCATAGGGGGTATCACCGGTGTCGCCGACGCGGGTGGCGATCATCGCCGCCGCCGTGgagcc                                                                                     >  2:183264/1‑237 (MQ=255)
                                                                                                                                                              ttCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  1:650087/239‑1 (MQ=255)
                                                                                                                                                              tgccaccccccccgccAGCGTCTTTTTGCTCACCCGCCGGCCGGTAAAACCAAGCAGGGCGCTAAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  2:592040/228‑1 (MQ=255)
                                                                                                                                                              tcccgcctcccccGCGGGCGGCTTTTTGCCGTCCCCCGAGCCGGTAAAACCAAGCCGGGCGCGGAACAGCAAAAACGCCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  2:1187520/237‑1 (MQ=255)
                                                                                                                                                              tcccgccgccgccgCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAgcagca                                                                                <  1:849571/237‑1 (MQ=255)
                                                                                                                                                                ccgcctccgccGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCCTGGGCGATATCGCCGTTGTCGGCGACGCGGGTGACGATAATAGCCCCCGcggcgggggagagcagg                                                                              >  2:1202633/1‑228 (MQ=255)
                                                                                                                                                                ccgcctccgccGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTCCGCACGTCATGGGCGATATCGCCGTTGTCGCTGGCGCGGGTGGCGATAATCGCCACCGCGGGGgaggagcgcagg                                                                              >  2:294599/1‑230 (MQ=255)
                                                                                                                                                                 cgcctccgccGCGCGCGGCTGTTGGCTCAGCCCCCAGCCGGTAAAACCAAGCAGGGCGCGGAAAAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCaggg                                                                             <  2:1092697/239‑1 (MQ=255)
                                                                                                                                                                   cctccgccGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGGTAATCGCCGCCGCGGTGGAGAGCAGCagggaa                                                                           >  1:862037/1‑239 (MQ=255)
                                                                                                                                                                        gccgccAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGATAATCGCCGCCGCGGTGGGGAGCAGCagggaaggga                                                                       >  1:1314905/1‑238 (MQ=255)
                                                                                                                                                                                  gCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCCTGCCAGCAGCTGGTTACGCACGGCATGGGCGATATCGCCGTTGTCGCTGACGCGGGGGACGCTAATCGCCGCCGCGGTGGGGAGCAGCAGGGGAGGGATCTGCGgcac                                                             >  2:44757/1‑238 (MQ=255)
                                                                                                                                                                                                 gCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATg                                             <  1:1198238/239‑1 (MQ=255)
                                                                                                                                                                                                       ccGGTAAACCCAACCAGGGCGTTGACCAGCAAAACCGGCGGGTGCGGCATTCCCGGTACCGCCGCCAGCACGAACATAATCCCGGTGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                        <  2:283826/239‑1 (MQ=255)
                                                                                                                                                                                                       ccGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtca                                         <  1:1202633/238‑1 (MQ=255)
                                                                                                                                                                                                        cGGTAAACCCAAGCAGGGCGCTAAACGGCAAAACCGCAGGGTCGGGTATTCCCGATCCCCCCGCCAGCACCAACATAATCCCGGTGGCGGTGTAGGGCGCCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                        <  2:1014825/238‑1 (MQ=255)
                                                                                                                                                                                                        cGGGAAAACCAACCAGGGCGCGGAACAGCAAAAACGGCGGGGGCGGCATTCCCGGTCCCCCCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGTTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcat                                        <  1:648308/238‑1 (MQ=255)
                                                                                                                                                                                                          ttAAAACCAACCAGGGCGCTGAACAGCAAAAACGTCAGGGCCGCCATTCCCGGTCCCGCCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATAGCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGtcatca                                      <  2:785076/237‑1 (MQ=255)
                                                                                                                                                                                                            aaaaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGc                                    >  1:334340/1‑238 (MQ=255)
                                                                                                                                                                                                            aaaaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGGGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGGTGGTCATCAGc                                    >  1:836441/1‑238 (MQ=255)
                                                                                                                                                                                                              acccAGGCAGGGCGCTGAACAGCAAAAGCGGCAGGTGCGGCATCCCCGGTCCCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                 <  2:355746/237‑1 (MQ=255)
                                                                                                                                                                                                              aaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                 <  1:1030490/239‑1 (MQ=255)
                                                                                                                                                                                                              aaCCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGcaca                                 <  1:1329100/239‑1 (MQ=255)
                                                                                                                                                                                                                ccAAGCAGGGCGCGAAACAGCAAAAAGGGCAGGGGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATa                               <  2:601296/239‑1 (MQ=255)
                                                                                                                                                                                                                 cAAGCGGGGCGCTGAACAGCAAAAACGGCGGGGGCGGCATCCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATAc                              <  2:556720/239‑1 (MQ=255)
                                                                                                                                                                                                                 cAAGCAGGGCGCTGAACAGAAAAACCGGCAGGGGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATAc                              <  2:326156/239‑1 (MQ=255)
                                                                                                                                                                                                                    gCAGGGCGCTGAACAGCAAAAACGGCAGGGGCGGCATTCCCGGTACCACCGCCAACACGAACATAATCCCGGGGGCGGGGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGCCAAGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATAGCCGCCGCGGGGGAGAGCAGCAGGGAAGGGGGCTGCGCCACCAGGCCGGCGCCCATGGTCATCAGCCCAGActg                            >  2:251765/1‑238 (MQ=255)
                                                                                                                                                                                                                       gggCGCTGAACAGAAAAAACGGCAGGTGCGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTgg                        <  1:488102/238‑1 (MQ=255)
                                                                                                                                                                                                                         gcgcTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCCCCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGGTAATCGCCGCCGCGGTGGGGAGCAGCAGGGAAGGGATCTGCGCCACCCGGGCGCCCCCGAGGGTCATCAGGACATACCGCTGGaa                      >  2:870938/1‑239 (MQ=255)
                                                                                                                                                                                                                             taaacggaaaaacCGGGAGGGGCGGCATTCCCGGTCCCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGgc                   <  2:1068139/230‑1 (MQ=255)
                                                                                                                                                                                                                                    cAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCCCGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGGGGAGAGCCGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGGTGGTCCTCCGCACATACTGCTGGAAGGGAGCATCg            >  2:1179133/1‑238 (MQ=255)
                                                                                                                                                                                                                                    aaaaacCGGCGGGGGCGCATTCCCCGGTCCCCCCGCCAGCACGAACAAAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATc             <  2:389776/236‑1 (MQ=255)
                                                                                                                                                                                                                                     aaaaaCGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCAt              <  1:161502/235‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaaCGGCAGGTGCGGCATGCCCGGTCCCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGgcg         <  1:462262/239‑1 (MQ=255)
                                                                                                                                                                                                                                        aaCGGAGGGGGCGGCGTCCCCGGTCCCCCCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCt       <  2:405190/239‑1 (MQ=255)
                                                                                                                                                                                                                                              aGGTGCGGCTTTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGt  <  2:1002450/238‑1 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                            
CTGGGTGAGCGGGTTACCCTGTGCTTTGTCCACCAGCGCCACCAGTTTGTAACCGAGGCTTAAACTGATAGGCTCGATCAGCGGAATGGTTTCCCAACTGACCTGCTGCTCGCTGGTTTCGGTGATGGTGCGGGTCAGCGTTTCGAGGCTTTTCTCTTCCGCCTCCGCCGCCAGCGGCTGTTTGCTCATCCGCCAGCCGGTAAAACCAAGCAGGGCGCTGAACAGCAAAAACGGCAGGTGCGGCATTCCCGGTACCACCGCCAGCACGAACATAATCCCGGTGGCGGTGTAGAGCACCGACGGGCTTGCCAGCAGCTGGTTACGCACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGGTGGAGAGCAGCAGGGAAGGGATCTGCGCCACCAGGCCGTCGCCGATGGTCATCAGCACATACTGCTGGAAGGCAGCATCGGCGCTCAGGT  >  NC_000913/249300‑249772

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: