mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 18 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4560145 | 153 (1.230) | 3 (0.020) | 3/426 | NT | 1.9% | coding (536/684 nt) | yjiH | nucleoside recognition pore and gate family putative inner membrane transporter |
| ? | NC_000913 | = 4560252 | 157 (1.290) | coding (429/684 nt) | yjiH | nucleoside recognition pore and gate family putative inner membrane transporter | |||||
| * | ? | NC_000913 | 4345644 = | 155 (1.240) | 3 (0.030) | 3/398 | NT | 2.1% | intergenic (‑86/+36) | yjdF/fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) |
| ? | NC_000913 | 4345664 = | 134 (1.180) | intergenic (‑106/+16) | yjdF/fumB | DUF2238 family inner membrane protein/anaerobic class I fumarate hydratase (fumarase B) | |||||
| * | ? | NC_000913 | = 4333587 | 147 (1.180) | 3 (0.020) | 3/424 | NT | 1.9% | coding (364/669 nt) | basR | response regulator in two‑component regulatory system with BasS |
| ? | NC_000913 | = 4333605 | 169 (1.400) | coding (346/669 nt) | basR | response regulator in two‑component regulatory system with BasS | |||||
| * | ? | NC_000913 | = 4162839 | 147 (1.180) | 5 (0.040) | 4/424 | NT | 3.3% | coding (432/1101 nt) | trmA | tRNA m(5)U54 methyltransferase, SAM‑dependent; tmRNA m(5)U341 methyltransferase |
| ? | NC_000913 | = 4162849 | 150 (1.240) | coding (422/1101 nt) | trmA | tRNA m(5)U54 methyltransferase, SAM‑dependent; tmRNA m(5)U341 methyltransferase | |||||
| * | ? | NC_000913 | = 4040683 | 91 (0.730) | 4 (0.030) | 4/434 | NT | 3.3% | intergenic (+47/+223) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | NC_000913 | = 4213162 | 143 (1.160) | intergenic (+3/‑72) | rrfE/yjaA | 5S ribosomal RNA of rrnE operon/stress‑induced protein | |||||
| * | ? | NC_000913 | = 3845585 | 136 (1.090) | 4 (0.030) | 4/424 | NT | 3.9% | coding (1622/1767 nt) | adeD | cryptic adenine deaminase |
| ? | NC_000913 | = 3845808 | 65 (0.540) | coding (1360/1392 nt) | uhpT | hexose phosphate transporter | |||||
| * | ? | NC_000913 | = 3620862 | NA (NA) | 3 (0.020) | 3/428 | NT | 2.6% | coding (1671/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3621013 | 114 (0.910) | coding (1822/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | = 3357043 | 157 (1.260) | 3 (0.020) | 3/422 | NT | 1.9% | coding (2319/4461 nt) | gltB | glutamate synthase, large subunit |
| ? | NC_000913 | = 3357057 | 151 (1.260) | coding (2333/4461 nt) | gltB | glutamate synthase, large subunit | |||||
| * | ? | NC_000913 | = 3032402 | 112 (0.900) | 4 (0.030) | 3/424 | NT | 3.5% | coding (1036/1449 nt) | uacT | uric acid permease |
| ? | NC_000913 | = 3032405 | 111 (0.920) | coding (1039/1449 nt) | uacT | uric acid permease | |||||
| * | ? | NC_000913 | 2814163 = | 108 (0.870) | 3 (0.030) | 3/416 | NT | 2.8% | intergenic (+9/+55) | emrB/luxS | multidrug efflux system protein/S‑ribosylhomocysteine lyase |
| ? | NC_000913 | 2814187 = | 102 (0.860) | intergenic (+33/+31) | emrB/luxS | multidrug efflux system protein/S‑ribosylhomocysteine lyase | |||||