| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4227241 | 149 (1.070) | 3 (0.020) | 3/412 | NT | 2.1% | coding (3414/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
| ? | NC_000913 | = 4227342 | 141 (1.060) | coding (3515/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4226997‑4227241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgggcCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGATCAGCTCTTCGTTGCTGAGGTTCTCGTTCGGCGCATAG‑CCCCAGTAGACTTTACGCACACGCTCATGGAGATACTCCGCAAAGGCTTCGGCTAAACG < NC_000913/4227342‑4227107 ACATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCA < 2:644335/239‑1ACATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCGTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCA < 1:57778/239‑1 CATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCAC < 1:14919/239‑1 ATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGGAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGCCCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAGGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACC > 1:1143381/1‑239 CGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGGCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGG > 1:458800/1‑239 CGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGAGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCACCCGTCCGGCACCGG > 1:780534/1‑239 GCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGG > 1:1209347/1‑237 ACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTT > 2:1395348/1‑239 AAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGG < 1:1395348/239‑1 ATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGCTCAGCTCTTCGTTGCTGAGGATCTCG > 1:246026/1‑239 GCACCGGGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGATCAGCTCTTCGTTGCTGAGGTTCTCGTTCGGCGCATAGCCCCCAGTAGACTTTACGCACACGCTCATGGAGATACTCCGCAAAGGCTTCGG < 2:1162576/239‑1 CGGGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGATCAGCTCTTCGTTGCTGAGGTTCTCGTTCGGCGCATAG‑CCCCAGTAGACTTTACGCACACGCTCATGGAGATACTCCGCAAAGGCTTCGGCTAAA < 1:127741/239‑1 GGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGATCAGCTCTTCGTTGCTGAGGTTCTCGTTCGGCGCATAG‑CCCCAGTAGACTTTACGCACACGCTCATGGAGATACTCCGCAAAGGCTTCGGCTAAACG > 2:1513276/1‑239 GGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGATCAGCTCTTCGTTGCTGAGGTTCTCGTTCGGCGCATAG‑CCCCAGTAGACTTTACGCACACGCTCAGGGAGATACTCCGCAAAGGCTTCGGCTAAACG > 1:1505741/1‑239 GGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGT > 1:162652/1‑133 GGCCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGT < 2:162652/133‑1 ACATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4226997‑4227241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgggcCACATGGCGAAAGATTCTGTGAGTTTCATGCCAGTGTGTTTTTCCACTTCCAGCAGCTCCCAGATGGTGGCTTTTTCCGTATGTTCCGGGCAGGCCGGATAGCCCGGTGCCGGACGGATGCCCTGGTAGTTTTCGCGGATCAGCTCTTCGTTGCTGAGGTTCTCGTTCGGCGCATAG‑CCCCAGTAGACTTTACGCACACGCTCATGGAGATACTCCGCAAAGGCTTCGGCTAAACG < NC_000913/4227342‑4227107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |