| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,504,667 | T→G | 21.9% | C317W (TGT→TGG) | insQ → | IS609 transposase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,504,667 | 0 | T | G | 21.9% | 87.3 / 3.4 | 47 | C317W (TGT→TGG) | insQ | IS609 transposase B |
| Reads supporting (aligned to +/- strand): ref base T (23/13); new base G (3/8); total (26/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.33e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCACGCAATGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGG > NC_000913/1504436‑1504901 | ccACGCAATGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATa < 1:436368/239‑1 (MQ=255) cGCAATGATAGTCATGGAGGATTTGAAGGGCGGCAACATGGCAAAGTCAGAAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTGTAAACCGTTCGATACTGGATCAGGGCTGGTAGGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAg < 2:1688504/239‑1 (MQ=255) cGCAATGATAGACATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAg < 2:167840/239‑1 (MQ=255) cGCAATGAGAGTCATTAAGGATTAGAAGGTCAGGAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAg < 2:798640/239‑1 (MQ=255) tGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACCAGCCAG‑CGTTGCGCGTACTTTGGGCATACAGCGAAAGAGAACCGc > 2:879037/1‑238 (MQ=255) ttGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGGCCTACAGCGAAAGAGAACCGCCTGTcaca > 1:984881/1‑239 (MQ=255) gTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTaa > 1:891234/1‑239 (MQ=255) cATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGGTCCGCCAGCGTATACAAGCCAG‑CGTTGTGCGTACTGGGGTCATACAGCGAAAGAGAAACGCCTGTCACAAAAGAAATTCAGAt > 1:912330/1‑239 (MQ=255) tGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGTGGCGTGCTGTTCCGCCCGCGTATACAAGCCAG‑CGTTGCGCGTACTGGGGTCATCAAGCAAAAGGGAAACGCCTGTCCCCAAGAAAAATCAAATg > 2:721603/1‑238 (MQ=255) cAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCTTGGCGGTCAGGGGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑GTTTGCGCGTACTGGGGTCATACAGCGAAAGGGAACCGCCTGTCCCAAAGTAAATTCAGATGCCAg > 1:735576/1‑239 (MQ=255) aaaGGCAGCGGCGGGTAGGG‑TCAGCCGGCCGGGGGGAAAGGGCGGGGCA‑AAAGCGGGTTTAAACGGTTGGATACGGGATCGGGGCGGGGATGAAGTGCGCCGCCAGCTGGCGTATAAGCAGCTCGGGGGGGGGGGTGGGGTGCTTGCTGTTCCGCCAGCATATACAAGCCGG‑TGTTGCGAGTATTGTGTTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAgg < 2:1562383/239‑1 (MQ=255) aGTCAGGAGGGGGTACGG‑TCAGCCCGCCGGGGCGCAGTGTCGGGGAA‑AATACGGGTTTAACCGGTGCGATTGGGGATCGGGGCGGGTAGGAAATGCGCCGCCGGTTGGCGTATAAGCAGCTGTGGCGGGGGGGTCGGGTGTTGGCTGTCCCGCCAGGGTATACAAGCCGG‑CGTGGCGCGTATTGGGGTCATACAGCAAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTa < 2:472553/239‑1 (MQ=255) cagcgggggTACGGCACAGCGCGCGGGGGCGCATTG‑CCGGGCACAAAGCGGTTTAAAACCTTTCGAGACGGGACGAGGGGTGGTATGAAGTGGGCCGCCGGCTTGCGTATAAGAGGCTGTGGCTTGGGGGTCGGGTGTTTGCTTTTCCGCCAGCGTATACAAGCCAG‑TGTTGCGCGTACTGTGGTAATAAAGCGAAAGAAAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTAtg < 2:657711/232‑1 (MQ=255) acgccgcccGGGGAGCAATGGCCGGACA‑AATCCGGGTTTAACTCGTTCGATGGTGGAGTGGGGTGGTTATGAAGTCCGCCGCAGGCTTTCTTTAAAGAACCTCTGGCGTGGCGGTAGGGGGCTGGCTGTCCCGCCAGGGTAAACAAGCAAG‑CTTTGGGCGATTTGTGGTCACACAGGAAAAAAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACg < 2:1075939/232‑1 (MQ=255) gccagccGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGGCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGAAGCCCGGTATGTGGATATACAGCGAACGcc > 2:1491885/1‑239 (MQ=255) ccGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGTAAGAAAACCGCCTGGCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCCAACGCCGATGt > 1:841948/1‑239 (MQ=255) ggCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGGAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAAt > 1:864979/1‑239 (MQ=255) cgcAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCTGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGGCATACAGCGAAAGAGAACCGCCTGTTACAAAGTAAATTCAGATGCCAGGTATGTGGATCTACAGCGAACGCCGATGTAAATg > 1:171491/1‑238 (MQ=255) aaTGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCGGTTCCGCCAGCGTATACAAGCCCG‑CGTTGCGCGGACGGTGGTCCTACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGgcg > 2:698552/1‑238 (MQ=255) cGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGGGCTTGCTGTTCCGCCAGCGTATACAAGACAG‑CGTTGCGCGTACTGTGGTTATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCCGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCa > 1:9325/1‑238 (MQ=255) ttCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATa < 1:398693/128‑1 (MQ=255) ttCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATa > 2:398693/1‑128 (MQ=255) ttCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGGACGcc > 1:391900/1‑238 (MQ=255) ttCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGGGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGGAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAAAATTTTAGCGGCGGGGCACGcc > 2:845539/1‑238 (MQ=255) tGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGGACCCCgggccttc > 1:167746/1‑231 (MQ=255) gATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGGGGATATACAGCGAACCCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCGCGCCGCTCTTGc > 2:780420/1‑236 (MQ=255) gggCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGCGCTTGCTGTTCCGCCAACGTATACCAACCAG‑CGTTGCGCGTACTGTGGTCATACAGCGCAAGAGAACCGCCTGTCCCAAAGGAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGGTGTAAAAGGCGCTCCGAACATTTTAGCGGCCGGGCACGCCGCTCttcgcctcggag > 2:995808/1‑229 (MQ=255) agaaaaTGCGCCGCCGGTTGGGGTATAAGCAGCTCGGGGGGGGGGGTCGGGTGGTGGCTGTCCCGCAGGCGAAAAAAAGCCAG‑GGTTGCGCGGACGGGGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTg < 2:107513/236‑1 (MQ=255) cgccgcCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGGACGCCGCTCTTTGCTCTGGTGAGGCGGgtcagtcaa > 2:166238/1‑237 (MQ=255) ccAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGGTCTTGCCCGTGGAGAGGTGGGGGAGACAAgccgc > 1:1722442/1‑238 (MQ=255) aaGCAGCTCTGGCGTGGCGGTCGGGTGCTTGCTGTTCCGCCAGCTTATAAAAGCCAG‑GGTTGCGCGTACTGGGGTCATCCAGCAAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGa < 1:1201933/239‑1 (MQ=255) agcggcTCGGGCGGGGCGTTAGGGTTCTGGCTGTCCCGCAGGCGTATAAAAGCCGG‑CGTGGGCCGTACGGGGGTCAAACGGCGAAAAAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGaa < 1:1336824/239‑1 (MQ=255) gcgtggcgGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATg > 1:854833/1‑140 (MQ=255) gcgGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGGCCGCCGGTCTTTTCTGGGGGGGGATGGTGTGGTCAGGGCGCCCGCTGGAGCAGGGAcccccccccaaagtt > 1:1108176/1‑230 (MQ=255) gtgtTTGCTGTCCCGCCAGCGTATACAAGCCAG‑AGTTGCGCGTACTGGGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGa < 1:857263/238‑1 (MQ=255) gTGCTGGCGGTCCCGCCGGCGTAAACAAGCCGG‑CGTGGCGCTTACTGTGGCCATACAGCAAAAAAAAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGa < 1:962587/238‑1 (MQ=255) tgcttg‑tgTTCCCCCAGTGTTTACAAGCCCGATGTTGCGGGACCTGGGGCCATAGACAGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCg < 1:177260/236‑1 (MQ=255) tcgttttCCGCCAGCGTATACAAGCAAG‑CGTTGCGCGTATTGTGGTCAAACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCt < 1:1717341/234‑1 (MQ=255) tGTCCCGCCGGCGTATAAAAGCCCG‑GTTTGCGGGTATTGTGGTAATACAGCAAAAGAAAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGaa < 1:1718510/239‑1 (MQ=255) tGTCCCGCCAGCGTATCCAAGCGAG‑GGTTGCGCGTATTGGGGTAATACAGCAAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGaa < 1:1111438/239‑1 (MQ=255) aaaCAAGCCGG‑GGTTGCGCGTCCTGTGTACAAACGGGGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGACCCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATcc < 2:1720600/237‑1 (MQ=255) aCAAGCCAG‑CGTTGCGCGTACTGTGGTCATAAAGCAAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCAc < 1:879037/239‑1 (MQ=255) aaGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTca > 1:918180/1‑52 (MQ=255) ccAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGGTCTTTCCTTTGGAGAGATGGGGCAGGCACGCCGCCCGCTGGAGCAGGAACCCCCCCAAATAATTCAAGCGGCCGCCTGAAAGCAGCAGGGCTCCCCGTCCt > 1:674935/1‑239 (MQ=255) ccAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCCGTCTTGCCTGTGGGGAGATGGGGCCGTCAAGCCGCCCGCTTAAGCAGGAACCCCCCCAAATGATTTCGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCt > 1:173481/1‑239 (MQ=255) cGTTGCGCTTCCTGGGGACTTACAGGAAAGGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCa < 1:721603/238‑1 (MQ=255) gcgaattgtgGTCATACAGAGAAAGAGACCCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTg < 2:167746/233‑1 (MQ=255) aCTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGGTCTTGCCTGTGGAGAGATGGGGCAGGCAGGCCCCCCGTTGCAGCAGGAACCCACCGAAATGATTCAGGGGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTggggg > 1:1498591/1‑239 (MQ=255) | CCACGCAATGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGG‑TCAGCCAGCCGGGGCGCAATGTCCGGGCA‑AAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAG‑CGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGAACGTAGCAGGGATCCACGTCCTTCAGGGCGTGGAGG > NC_000913/1504436‑1504901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |