| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,395,466 | G→C | 13.0% | A144G (GCT→GGT) | nuoJ ← | NADH:ubiquinone oxidoreductase, membrane subunit J |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,395,466 | 0 | G | C | 13.0% | 165.9 / 3.3 | 58 | A144G (GCT→GGT) | nuoJ | NADH:ubiquinone oxidoreductase, membrane subunit J |
| Reads supporting (aligned to +/- strand): ref base G (43/7); new base C (2/6); total (45/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.27e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATGATTTCCAGACCAATCAACATAAACAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAA > NC_000913/2395232‑2395698 | cATGATTTCCAGACCAATCAACATAAACAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAg > 1:156669/1‑239 (MQ=255) tGATTTCCAGACCAATCAACATAAACAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGT‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGt > 1:1208372/1‑238 (MQ=255) gATTTCCAGACCAATCAACATAAACAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGtt > 1:136870/1‑238 (MQ=255) aTCAACATAAACAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACg > 1:173743/1‑239 (MQ=255) aTCAACATAAACAGCAGATTGCGACGGATAACCAGACCGCTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGACCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCCCCCGCACGCTCTTCACGACCGACGTGGACGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAACCCAGTTCCACCGCCAGTACg > 2:631049/1‑239 (MQ=255) aCAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGa > 1:1010194/1‑239 (MQ=255) gcagATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACa > 1:782016/1‑239 (MQ=255) gaagtgtGCGAGTGAAAACCGCACCGTGTAAGCCAGGAAAGAATAAGATCGCCGCTATGATC‑GCACCTGTGTGTCGGGGCATCG‑TGCGTGCCCCCCCTTTTTGCTTTCCGCGCTGCCTTCTTTACGATTGCTCACCACTCCCCCCGCCAGCTCTCCACGACCGCCGTGGAGGC‑CCACACCCAGTCCTGCGAGCAGCAGCAGAAAACCCAGTTCCACCGCCAGTACGTAAGGCCCGaa < 2:667136/231‑1 (MQ=255) gaagtggCGACGGATAACCAGACGGATTAAGCAAAGAAGGAATAAGGTGCCCGCGGGGTTCAGTCAAGGT‑TGTAAGGGGTTCA‑TCCGGGCTCCCCCGTTTTTCTTTCCCCGCGTCCGTCTTTAGATTTGCCCAGCCCTCCCCCCGCACGCTTTTCACGACCGCCGTGGAAGC‑CCACACCCAGCCCTGCGAGCAGCAGCAGAGATGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACa < 2:702751/232‑1 (MQ=255) cagATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGACGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACa > 1:41678/1‑238 (MQ=255) agATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGc > 1:1017171/1‑239 (MQ=255) aTTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGt > 1:2698/1‑239 (MQ=255) aTTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGt > 1:1128939/1‑239 (MQ=255) atacccgtcccGGTTAACCAAAGACCGATTAAGTTTCCCGCGATGATCATTCCTTTT‑TGTAAGGGGATCA‑TCCCTCCTCCCCCTTTTTTTTTTCCCCGCGTTCGTCTTTCCGATTGCACAGCACTCCCCCCCCCCGCTCTCCACGACCGCCG‑GGAAGGCCCACACCCAGCCCGGCGAGCAGCAGCATAAAACCCGGTCCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCAc < 2:1172974/229‑1 (MQ=255) aTACCCAGACGGGTGAAGCCAAGAACGAATAAGATCGCGGCGATGTTCAGTCCGTGT‑TGTAAGGGGATCA‑TGCGTCCCCCTCCTTTTTTCTTTCCGCGCTGTCGTTTTTACGATTGCCAACCACTCCCCCCGCACCCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCAc < 2:173743/238‑1 (MQ=255) aTAACCAGGCGTGTTAAGCAAAGAACAAATAAGTTCCCCGCGGGCATGTGTCCGTTT‑GGTAAGGGGATCC‑GGCTCGCCCCCCCTTTTTTCTTCTCGGGCTGCCGTCTTCACGATTGCCCAGCACTTCCCCCGCACCCTCTACACGCCCGAGGTGGACGG‑CCACAACCAGCCCGGCGAGCCGCAGCATAAAACCCAGTCCCGCCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCAc < 2:1208372/238‑1 (MQ=255) aCCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGc > 1:660119/1‑239 (MQ=255) ccGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGc > 1:150935/1‑238 (MQ=255) ccGGTGAAGACAAGGACAAAGAATACTGCCGGGGTGATTAGTCCATTG‑TGTGCGGGTACCG‑TGCGTCCTCCTCTCTTTTTCTTTTCGCTCTGTCTTCTTTACGATTGCCCAGCACTTCGCCCGCCCGCTCTTCCCGCCCGACGTCAAAGA‑CCACAACCAGCCCTGCGGGCAGCAGCATAAAAGCCAGTTCCGCCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCa < 2:859170/239‑1 (MQ=255) aaaagAATAAGTGTCCCGCGGGGCTCAGTCGATTT‑TGTGAGGGGACCA‑GGCGTGCCCCCCTGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCACAGCCCCCCCCCCGCACGCTCTTCACGACGGACGGGAAAGG‑CAACACCCAGACCGGCGGGAAGCAGCAAAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTAc < 2:136870/235‑1 (MQ=255) aTAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGaa > 1:930788/1‑195 (MQ=255) tGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTg > 1:904913/1‑239 (MQ=255) ccGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGa > 1:258300/1‑238 (MQ=255) ccGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGa > 1:308735/1‑238 (MQ=255) aGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCa > 1:1021825/1‑206 (MQ=255) cctgt‑tttTAGGGGGTCAGTGCGTCCCCCTCCTTTTTTCTTTCCGCGCTGCCGTTTTACCGTTTACCCACCACTACCCCCGCCCGCTCCACCCGACGGACGGGGAGGG‑CCACAACCAGCCCGGCGAGCACCAGCATAAAACCCAGTCCCTCCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAgg < 2:1017171/237‑1 (MQ=255) gt‑tgtAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATg > 1:980218/1‑238 (MQ=255) gt‑tgtAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAACCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTCACTGGCGTACCGTCGATACCCTGATCCTTAACACCGACGATg > 2:868722/1‑238 (MQ=255) accA‑TGCGTGCTCCTCCTTTTTTCTTTTCGCGCTGTCGTCTTTACGTTTGCTCAGCACTACCCCCGCACGCTCTACACGACCGACGTGGAAGG‑CCAAACCCAGCCCGGCGAGAAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAAt < 1:100189/236‑1 (MQ=255) aTCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCa > 1:408568/1‑182 (MQ=255) aTCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCAAACAGCGTAATACACACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATAGTTAACACCGAGGATGGCGTAAACAATc > 1:55143/1‑239 (MQ=255) cA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATca > 1:406283/1‑238 (MQ=255) gTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCAccacca > 1:59753/1‑239 (MQ=255) ctcctcCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCa > 1:318426/1‑239 (MQ=255) ctcctcCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCa > 1:1130953/1‑239 (MQ=255) cttttcGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTgg > 1:622941/1‑167 (MQ=255) ttcGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAAt > 2:994059/1‑239 (MQ=255) aCGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGACTGGCGTAAACAATCACCACAAGCATGATGGCCGACAAAATTGCCGCACCAATCcac > 1:1004757/1‑238 (MQ=255) gATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCcaaa > 1:262866/1‑235 (MQ=255) tGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGGAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTACCGGACCAATCCACACCTg > 2:1104484/1‑238 (MQ=255) cTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTACTACCCACTGCTTTAGCACTGATTGGCGTACCGTCGCTACCCCGCTCGTTAACACCGAGGATGGTGTAAACAATCACCACCAGCATGATGGCCGAAAAACTTGCCGGACCAATCCAAACCTCCgg > 2:380718/1‑239 (MQ=255) ccGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGACCAGCGTAATACCCACTGCTTTAGCACTGATTGGCGCACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGCTGGCCGACAAAATTGCCGGACCAATCCCCACCTGCGGTCTCAGcacccg > 2:1203077/1‑233 (MQ=255) tctTCACGACCGACGTGGAAGG‑CCCCAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGtt > 1:173067/1‑235 (MQ=255) ttCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGt > 2:77068/1‑238 (MQ=255) ttCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGGACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCCATCCACACCTGCGGTTTCAGCCACTGACGTTCCTGt > 2:409255/1‑238 (MQ=255) ccacacgcggcGTGGAGGG‑CCACAACCAGCCCGGCGACCCACAGCATGGAACCCATTGCCACCGCCAGTCAGGAAGGCCCGAACAGCGTAATTCCCACTGCTTTAGCACGGATTGGCGTCCCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAGTCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTc < 2:104982/229‑1 (MQ=255) cgacGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGAtt > 1:1100084/1‑236 (MQ=255) cggTGAAAGG‑CCCCAACCAGCCCTGCGACCGGCAGCATAGACGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGa < 1:1064587/237‑1 (MQ=255) acGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTACTACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCAACACCTGCGGTTTCAGCCACTGTCGGTCCTGTTCGATTTCTGa > 1:859403/1‑239 (MQ=255) acGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGCCGTTCCTGTTCGATTTCTGa > 2:656296/1‑239 (MQ=255) cacaACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGt > 1:128640/1‑239 (MQ=255) caACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATAGTTAACACCCAGGATGCCGTAAACTATCCCCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCCGCGGTTTCAGCCACTGGCCTTCCTGTTCGCTTTCTCAACCGCCCAGGTTg > 2:997903/1‑239 (MQ=255) gCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCAtcatca > 1:229544/1‑238 (MQ=255) gCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCAtcatca > 1:833254/1‑238 (MQ=255) gAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGCTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATcacc > 2:828805/1‑238 (MQ=255) aggtgcaTAGAACCCATAGCAACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACcacga < 1:58747/234‑1 (MQ=255) agcagcaTAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACcacga > 2:686434/1‑238 (MQ=255) aTAAAAGCCAGTCCCGCCGGCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACcacgaacacgaa < 1:985454/239‑1 (MQ=255) | CATGATTTCCAGACCAATCAACATAAACAGCAGATTGCGACGGATAACCAGACCGGTTAAGCCAAGAACGAATAAGATTGCCGCGAGGATCAGTCCATGT‑TGTAAGGGGATCA‑TGCGTGCTCCTCCGTTTTTCTTTTCGCGCTGTCGTCTTTACGATTGCTCAGCACTTCACCCGCACGCTCTTCACGACCGACGTGGAAGG‑CCACAACCAGACCTGCGAGCAGCAGCATAGAAGCCAGTTCCACCGCCAGTACGTAAGGCCCGAACAGCGTAATACCCACTGCTTTAGCACTGATTGGCGTACCGTCGATACCCTGATCGTTAACACCGAGGATGGCGTAAACAATCACCACCAGCATGATGGCCGACAAAATTGCCGGACCAATCCACACCTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAA > NC_000913/2395232‑2395698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |