| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,615,865 | A→C | 16.3% | T209P (ACC→CCC) | nikB → | nickel ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,615,865 | 0 | A | C | 16.3% | 183.9 / 3.2 | 78 | T209P (ACC→CCC) | nikB | nickel ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (39/20); new base C (2/13); total (41/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.11e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTACGTTTCATCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACGCTGATGATGGTGGT > NC_000913/3615643‑3616097 | gTACGTTTCATCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTgcg < 2:968858/239‑1 (MQ=255) cATCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTTGCAGCACATCATTTTTCCTGCGGTTTCCATTGGCTTTATGTCGGTGGCGGTTAACGCGCGTTTACTGCGCGCCTGTATGCTGGACGGTGCCGGTCCGCGTCACGCCACCCGGGCGGGtgcgccggg > 2:974915/1‑226 (MQ=255) tCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAAc < 1:1085134/239‑1 (MQ=255) ttCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGGTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTTTGCTGGACGTCGCCGGGCAAGGTCCCGGCCCCTGGGCCGCTCTGCGCGGCCTgcgcgccaa > 2:776728/1‑230 (MQ=255) tCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCt < 1:654390/228‑1 (MQ=255) gCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGGCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGAc < 2:294956/238‑1 (MQ=255) tCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGGCCCTCATTTTGCCTGCGGTTTCCATTGCCTTTTTGTCGCTGGCGATTAACGCGCGTTTTCTTCGCGCCCGTATGCTGGGCGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGCACGGCACGCAGaccgaccg > 2:182094/1‑239 (MQ=255) tCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCCGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGGTTACTGCGCGCCAGTATGCTGGCCGTCGCCGGTCAGCGTCCCGTCACCTGGGCGCCGCTGGCGGGCCTGGACGAGaaa > 2:654390/1‑228 (MQ=255) cGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACg < 1:78303/238‑1 (MQ=255) cGATGCCTAACTTCTGGCTGGCGGTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGGCCGAACg < 1:311322/238‑1 (MQ=255) tGCCTAACGGCTGGCTGGCGTTTTTACTGGTGAGTGTGGTTTCGGTGTATCTGCAATGGCGACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTGCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGc < 2:1137949/239‑1 (MQ=255) gCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCTCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGcc < 1:141609/239‑1 (MQ=255) aCTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAt > 1:810407/1‑238 (MQ=255) aCTTCTGGCTGGCGTTTGTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑c < 1:483376/239‑1 (MQ=255) tggctggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACCT‑CCTgc > 1:928275/1‑238 (MQ=255) gctggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGTGCGCGTCTGCGCGGCCTGGACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCa > 1:264513/1‑239 (MQ=255) gctggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCa > 1:79590/1‑239 (MQ=255) gctggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGGTTCCATTGCCTTTATGGCGCTGGCGATTAAACCGCGTTTACTGTGCGCCAGTATTCTGGACGTCGCCGGTCAGCGTCACGTCACCCGGGCGCGGCTGGGCTGCCTGGACGGCAAACAGACCGAACGTCGCCCCCT‑CCTgcgcc > 2:106347/1‑238 (MQ=255) ctggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCa < 2:365645/238‑1 (MQ=255) ggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTggg < 2:625593/182‑1 (MQ=255) ggcGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTggg > 1:625593/1‑182 (MQ=255) cGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACCGCACCTGGGCGCGTCTGCGCGGCCTGACCGGCAAACAGACCGAACGTCGCCACAT‑CCTGCGCACTGc > 1:1096376/1‑238 (MQ=255) tttACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGc < 2:313557/239‑1 (MQ=255) gggggATGGCGTTTTCGGGTTAGTTGAAATGGCTTCCCGGGGTGGGTTACGGCGGCTGGCAGCACATCATTTGGCCTGCGGTTTCCATTGCTTTTAGGTCGGTGGCGATTAACGCGCGTTTACTGCGCGCCAGTAGGCTGGCCGTCGCCGGTCAGCGTCACGTCCCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCg < 2:1058242/235‑1 (MQ=255) tGGCGTTTGCGGTGTATCTGCAATGGCTCCCCGCGATGGGTTACGGGGGCTGGCGGCACCTCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCCCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCgatgat < 2:976643/238‑1 (MQ=255) cGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGTTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCACTGCCGATGATCAc < 1:171856/238‑1 (MQ=255) cGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCAc < 1:6729/238‑1 (MQ=255) tttttGGTTGTATCTGCATTGCCTCCCCGCGATGGGTTACGGGGGTTGGCAGCCATTCATTTTGCCTGCGTTTTCCATTCCCTTTATGCCGCTGGCGATTACCGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCCCGTCCCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGCCCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCAccg < 2:180195/238‑1 (MQ=255) cGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTg < 1:72202/239‑1 (MQ=255) cGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTGGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCCCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTg < 1:335009/239‑1 (MQ=255) gtACCTGCAGTGGCTCCCGGCGATGGTTTCCGGCGGCGGGCAGCACATCATTTTGCCTGCGGTTCCCATTGCTTTTATGTCGCTGGCGATTAACGCGCGTTTACGGCGCGCCAGTAGGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTgggg < 2:3558/238‑1 (MQ=255) aTGGCTACCCGCGTTGGGTTACGGCGGCTGGCACCACATCATTGTGCCTGCGGTTTCCATTGCCTTTAGGTCGCTGGCGTTTACCGCGCTTTTCCGGCGCGCCGGTATGCGGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCg < 2:1087345/239‑1 (MQ=255) aTGGCTACCCGCGATGGGTTACGGCGGCTGGCAGGATATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGGGATTAACTCGCGTTTACTTCGGGCCAGTATGCGGGGCGTTGCCGGTCCGCGCCCCGTACCCCTGGCGCGTCTGCGCGGCCCGGACGAAACAACGACCCAACGGCGCCACATCCCTGC‑CAATGCATCGCCGCCGCTGATCCCCGCCTCGGGGATACatcgtg > 2:71801/1‑235 (MQ=255) aTGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGGGGGGGTGCATATCg > 1:304059/1‑239 (MQ=255) gccgccccGCGTTGGTTAATGGGGGCTGGAAGCACGTCATCTTGTCTGCGGCTCCCGTTGCCTTTGTGTCGCGCGGGCTGAACGCGCGTTTGTCGCGCGCCCGTAGGTTGGGCGCCGCCGTTCGGCGTCACGGCGCCGGGGCGCGTCTCCGCGTCCTGAACGACATACAGACGGACCTTCGCCACTT‑CCCGCGCGTTGCCTGGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGc < 2:425215/234‑1 (MQ=255) gCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCCGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGCTGATCACCGCCGTGGGGATGCATATCGGCg > 1:47130/1‑239 (MQ=255) ctccgcgcgATGGGTTACGGCGGCTGGGAGCACATCATTTTGCCGGCGGTTTCCTTTGCTTTTATGTCGCTGGCGATTAACGCGCGTTTCCTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCCCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGACCGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCg < 2:372206/233‑1 (MQ=255) cgccccGCGTTGGGTGACGGCGCCTGGCACCCCATCATTTTGCCTGCGTTTCCCTTTGCCTTTATGTCGCGGGCGCTTAACGCGCGTTTACTGCGCGCCGGTATGCTGGCCGTCCCCGGTCAGCGTCCCGTCCCCTGGGCGCGTCTGCGCGGCCGGACCGCCAAACAGCCCGACCGTCGCCACAT‑CCTGCGCAATGCCTGGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCg < 2:372485/235‑1 (MQ=255) cgATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGGTGATCACCGCCGTGGGGATGCATATCGGCGAACTGAtt > 1:824503/1‑239 (MQ=255) aTGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTCCCCCATGCCCCGCTCCCGACGATCACCGCCGTGGGGATGCCTATCGGCGAACCGATTg > 2:1125921/1‑238 (MQ=255) ttACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGCTTGGCggg > 1:901513/1‑238 (MQ=255) ggcAGGCCGCACCGCAGTTTGCCGGGGGTTCCCAATGCTTTTAGGGCGCTGGCGATTAACGCGCGCTTCCTGCGGCCCAGTATGCGGGACGTCGCCGGCCAGCGTCACGTCCCCGGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACCTGGCCACAT‑CCTGAGCAATGCCTCGCTGCCGAAGACCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACgatga < 2:1119674/238‑1 (MQ=255) gcTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGCACGACAAACAGACCGAACGCCGCCACCT‑CCTGCGCCATGCCTCGCTCCCGCTGCTCACCGCCCGGGGGTTGCCCATCGGCGAACTGATTGGCGGGACgcgtatt > 2:379216/1‑233 (MQ=255) gcTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGGCGGTGGtt > 1:402877/1‑239 (MQ=255) gcTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCCGGGCGCGTCTGCGCGGCCTGAACGGAAAACAGACCGCACGCCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGCCGATCACCGCCGTGGGGAGGCATAGCGCGCAACTGATTGGCGGGGCggggctt > 2:103729/1‑233 (MQ=255) gcaCGTTATTGTGCCTGCGGTTCCCGTTGTCTTTGTGGCGCTGGCGATTAACGCGCGTGTACGGGGCGCAGGTGTGGTGGCGGGCGCCGGTCAGCGTCACGTCGCCTGGGCGCGTCGGCGCGGCCTGAACGACAAACAGACCGACGGTGGCCACAT‑CCTTCGCAATGCCTCGCGGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGaaa < 2:281865/239‑1 (MQ=255) gCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGCTGATCACCGCCGTGGGGATGCATATCGGCGAACTGCTTGGCGGGACGATGATTTTCGAAAACCTGTTTg > 2:491943/1‑236 (MQ=255) cTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTg > 1:37030/1‑238 (MQ=255) cGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCg > 2:227428/1‑239 (MQ=255) tCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGt < 1:71864/239‑1 (MQ=255) ccATTGCCTTTATGTCGCTGTCGATTAACGCGCGTTTACTGCGCGCCAGTATGCGGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTc < 1:258727/239‑1 (MQ=255) ttATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTAt > 1:889976/1‑239 (MQ=255) tATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGGTGATTATCGAAAAAATCTTTGCCTGGCCGGGCGGCGGGCGCTacg > 2:661910/1‑237 (MQ=255) aTGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGGTTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGGCATGc > 1:671150/1‑239 (MQ=255) gCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGGTGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGCTCATTATCGGCAACATCTTTGGCTGGCCGGGCGTCCGGGGCCATGCGgggt > 2:364811/1‑239 (MQ=255) gCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGCACTGATTGGCGGGACCATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCCGGCGCTCTGCGgtgg > 2:1012973/1‑238 (MQ=255) gCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGGTGATTATCGAAAAAATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGgtg > 1:634741/1‑238 (MQ=255) gCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACCACTTTGCCTGGCCGGGCGTCGGGCGCTCTGCGgtg > 1:125442/1‑238 (MQ=255) gCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACAATTTTGCCCGGCCGGGCGCGGGGGGCAAGGCGgtg > 2:796820/1‑238 (MQ=255) cTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGCCGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGCACGACAAACAGCCCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGGCGATGGTTATCGGAAACCACCTTGCCTGTCCGGGCGTCGGgcgccgctcggtgg > 2:579992/1‑228 (MQ=255) cTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAACACATCTTTGCCTGGCCGGGCGGCGGGCGCTATGCGGGGTc > 2:1079711/1‑239 (MQ=255) gggATTAACGCCCGTTTAGTGCGCCCCAGTAGGGTGGACGCCGCCGGACAGCGTCCCGTCCCCTGGGCGCGTCGGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCGGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCgg < 2:1027673/236‑1 (MQ=255) gattacccggcgTTTCCTGCGCGCCGTGATGCTGGCCCTCCCCGGTCAGCGTCACGCCCCCGGCGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGACCGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCGGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCg < 2:264513/229‑1 (MQ=255) gATTAACGCGCGTTTCCTCCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCCCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCg < 1:106347/238‑1 (MQ=255) cgTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGAATATCGAAAACATCTTTGCCTGGCCGGGCGGCGGGGGCTATGCGGTGTCGGCGA‑TTTTTAACCg > 1:62076/1‑239 (MQ=255) gTTTACGGCGCGCCAGTATGCTGGACGTCGCCGGGCAGCGTCACGTCTCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCAAAT‑CCTGCGCAATGCCGCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCg < 1:93466/238‑1 (MQ=255) tttACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAACCAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGCTTGGCGGGACGACGGTTATCGAAAACCGCTTTGCCCGGCCGGGCGGCCGGCGCGTTGCGGGGGCGCCGAGTTTTTAACCg > 2:602373/1‑238 (MQ=255) tttACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGAAGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGGGGTCAGCGGGGTCGGCGG‑TTTTTAACCgcg > 1:51166/1‑237 (MQ=255) ttACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCGGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCGGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGa < 1:1000763/239‑1 (MQ=255) cgcgcCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGGTGCATATCGGCAACCTCTTTGTCTGGCAGGGAGCCGGGCGCCATGCGGTGGTGGCGA‑TTTTTAACCCTGACTAtg > 2:1006991/1‑237 (MQ=255) cgcCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTTGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGG‑TTTTTAACCGTGCATATcccg > 1:334868/1‑237 (MQ=255) gtgcgtggcgccGCCGGCCAGCGCCACGCCCCCGGGGCGCGCCTGCGCGGCCTGAACGACAAACAGACCGACGGTGGCCACAT‑CCTGCGCAATGCCTGGCTGCGGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCa < 2:634741/228‑1 (MQ=255) aTGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGAAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCa < 1:1079711/239‑1 (MQ=255) tGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCAGGTGATCCAgggt > 1:850456/1‑236 (MQ=255) gTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGGCGGTGGTTATACAAAACCTCTTTGCCTTGCCGGGCGTCGGGCGACATGGGGGGTCGGGGG‑TTTTTTACCGTGACGAATCGGCGTTCCCGTGCtttcc > 2:647132/1‑237 (MQ=255) cGCCGGTCCGCGTCACGTCCCCGGGGGGCGTCTGCGCGGCCTGAACGACCAACAGACCGAGCGTCGCCACAT‑CCTGCGCAATGCCCCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACg < 2:184474/238‑1 (MQ=255) cGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTAc > 1:180987/1‑237 (MQ=255) gCCGGTCAGCGTCACTTCCCCGGGGCGCGTCGGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACGCt < 1:488642/239‑1 (MQ=255) cgtcacgtcaCCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGGGATCCAGTGCTTTACGCTGATGAtggg > 1:95612/1‑238 (MQ=255) gtcacgtcccCTGGGCGCGGCTGCGAGGCCTGAACGACAACCAGCCCGACCCTCACCTCTT‑CCGGCGCAATGCTTCGCTGCCGAAGATCACCGCCGTGGGGATGCTTTTCTGCGGTCTGATTTTCTGTACTATGATTATCTCAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTGTGCGGTGTCGTCGT‑TTTTTTACCTTTACTATCCGGTGATCCATTTCTTTACACTAATGAtggt < 2:1062961/238‑1 (MQ=255) cccgtcacCGGGCCGCGTCTGCGCGGCCTGAAGGACAAACAGACCGAACGTCGCCACAT‑CCTGCGAAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACGCTGATGAtggtggt < 1:58411/237‑1 (MQ=255) | GTACGTTTCATCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACAT‑CCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGA‑TTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACGCTGATGATGGTGGT > NC_000913/3615643‑3616097 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |