Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,206,477 T→A 15.6% S5R (AGT→AGA ttdA → L‑tartrate dehydratase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,206,4770TA15.6% 133.1 / 5.6 76S5R (AGT→AGAttdAL‑tartrate dehydratase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base T (16/42);  new base A (3/9);  total (25/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAG  >  NC_000913/3206243‑3206709
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                                           <  2:811918/238‑1 (MQ=255)
cAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                                           <  2:122054/238‑1 (MQ=255)
cAGCTAGTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                                                                                                                                                                           <  2:934021/238‑1 (MQ=255)
      ttCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                                                                                                                                                                    <  2:724441/239‑1 (MQ=255)
           cATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACTGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                                                                                                                                                               <  1:655680/239‑1 (MQ=255)
            aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                 <  1:415957/236‑1 (MQ=255)
            aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                 <  1:1126239/236‑1 (MQ=255)
            aTCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                 <  1:611726/236‑1 (MQ=255)
             tCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTAATTTTTTCAGACCAATAAAAAAACTGGAGTTGCCATTATGTGGGGAAGTAAATATCAAAAGGCAgg                                                                                                                                                                                                                             >  1:348989/1‑238 (MQ=255)
                ttAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTTAGACAAATACAAAAACAGGAGTTTTCATAGTGAGCGAAAGTAAAAAACAAAAAGCaaggaa                                                                                                                                                                                                                          >  2:1096815/1‑234 (MQ=255)
                  aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATa                                                                                                                                                                                                                       <  1:1131454/239‑1 (MQ=255)
                  aaTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATa                                                                                                                                                                                                                       <  2:1150511/239‑1 (MQ=255)
                    ttATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                                                                                                                                                                     <  1:1121145/239‑1 (MQ=255)
                        ccGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGGATTTTTTCCAACAAATACAAAAAATAGAGATGCCCTGATGGGGGAAAGTAATTAGCAAAAAGGAAGGAACAAGTTgt                                                                                                                                                                                                                >  1:329533/1‑238 (MQ=255)
                         cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAAAAAAAACAGGGGGTGGCATGTTGAGCGAAAGAAATAAAAAAAAGACAGGGAATaaagttag                                                                                                                                                                                                                >  1:781108/1‑233 (MQ=255)
                         cGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                                                                                                                                                                 <  1:918535/223‑1 (MQ=255)
                               tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                                                                                                                                                                         <  1:149676/238‑1 (MQ=255)
                               tgtgATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                                                                                                                                                        <  2:857712/239‑1 (MQ=255)
                                   aTAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTTATACAAATACAAAAAAAGGGGTTGGCCTGATGAGGGGAAGTAATAAGAAAAAGACAGAGAATAAGATGACAGAGATTTTc                                                                                                                                                                                                    >  1:529893/1‑239 (MQ=255)
                                        cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTCAGACAAAAACAAAAAATGAGGTTGCCATGATGAGCGGAAGTAATAAACAAAAAGCAGTGAAAAAGTTGACAGAGATTGTGGCTa                                                                                                                                                                                                >  1:469486/1‑238 (MQ=255)
                                                aTTTCGCAAAACATTGCCATCCCCGTCTCTGGTGAAATATTCATTCTTATTTTCGCGTTGATTCAGGATCTCTTAATTACATATTCACGGTGACAAAAAATATAAAACCACATTTTTAGTTGGAGTTTGTGGCGGTGAATTTTCCCAGAAAAATACAAAACGTGGGGTCCCCTTGATGAGCAAAAGTATTAAGCAACAGGCAGTGAATAAGTCGCCAGATATGGTGCCTATCttgtcc                                                                                                                                                                                        <  2:329533/238‑5 (MQ=255)
                                                  ttCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTTAGAAAAAAACAAAAAATGGAGTTGCCATGATGAGGGAAAGTAATAAACAAAAAGCAGCGAATAAAGTTGCAGAGATTGTCGCTAAATTTatcac                                                                                                                                                                                      >  2:711860/1‑234 (MQ=255)
                                                       acagcATTGCCATTCCCTGCTCTGGCGCAATATTCATTTTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAAATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGAt                                                                                                                                                                               <  1:1143804/235‑1 (MQ=255)
                                                       aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGTATTTTTTCACACAAATAAAAAAAATCGGGTTGCCATTATGAGGGAGAGTAATAAACAAACCGCAGTGAATAAGGTGACAGGGATTGTCGTCAACCTTCACGCCCTGAt                                                                                                                                                                               >  1:968500/1‑239 (MQ=255)
                                                                 cATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTAAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                                                                                                                                                                     <  1:192075/239‑1 (MQ=255)
                                                                 cATTCCCTGCTCGGGCGCAATATTCATTCTTATTTTCGCTTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCg                                                                                                                                                                      <  1:966616/238‑1 (MQ=255)
                                                                   ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGCGATTTTTTTGCTCCATATACACAAAAACCAGGTGTCATGTTTTGGCAAAGTAAAAAAACACAGACACAGAATAAGTTTACAGCGATTGTCGTCAACTTTTCCGCCCTCATTTTTACCCTAAt                                                                                                                                                                   >  2:26330/1‑239 (MQ=255)
                                                                     cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTCACACAAAAACAAAAACACGAAGTGTCATGATGGGCGAAAAGAAAAAACAACAAGCAAGGAATAAAATGACAAAGAATTTCGCTAACTTTACAGCCATGATTTTTAACCGAATg                                                                                                                                                                  >  1:618797/1‑238 (MQ=255)
                                                                      ccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGAAAAATACAAAAACTAGAGGTGGCATGATGAGGGAAAGAAATAAAAAACAAACAGGGAATAAAATGACAAAGAATTTTGCCAAATTTTTCCCCCTAATTTTTACCCCaacttt                                                                                                                                                                >  2:1143804/1‑235 (MQ=255)
                                                                           tcgggacaattatTAATTGTTATTTCCCGTTTCATCCACAAAGTTTTAATTACATTTTCATGGTGGCAAAAAATAAAAACCCACATTTTTAGTGGTGGTTTGGGGCGTTAAATTTTTCCAGCAAAATAAAAAAACGGGAGTTGCAATGATGGGCGAAAGTAATAAGCAACAGGCAGTAAATAAGGTGACAGGGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCtgat                                                                                                                                                            <  2:920714/228‑1 (MQ=255)
                                                                               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTTGATTTTTTCCGCCAAAAAAAAAAAATGGAGTTGTCATGATGAGCGGAAGGAATAAAGAACAAGCAATGAATAAGTTGACAAAGAGTTTCGCTAACTTTACCGCCCTGATTTCTAACCGCATGCCtgctga                                                                                                                                                          >  1:325980/1‑236 (MQ=255)
                                                                               gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGATTTTTTCAGGAAAAAAAAAAAAATTGAGGTGGCCAGATGAGAGGAAGTAAAAAAAAAAAAGAAAGGGAAAAATTGAAAGAGAATTGTGCTTAACTTTACGCCCATATTTTTACCCCAAAGCCctatgaagg                                                                                                                                                       >  1:561769/1‑236 (MQ=255)
                                                                                     tatttattCTTATTTTGGCTTTGATTCACGAACTGTTAATTAAATATTCGGGGTGGAAAAAAATAAAAAACCACATTTTAAGTGGTATTTGGTGGCGGTGAATTTTTCCAGAAAAATACAAAAACGGGAGTTGCCATGAGGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATGGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                 <  2:267027/239‑1 (MQ=255)
                                                                                     tatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATAAAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                 <  1:1096815/239‑1 (MQ=255)
                                                                                     tatGCATGCTTTTTTGCGCGTTGATTCACGAACTATTAATTAAATATTCACGGTGGAAAAAAATAAAAAACCACATTTTGAGTGGTAGTTTGGGGGGGTAAATTTTTCAAAAAAAAAAAAAAACCGGGAGTTGCCATGAGGAGGGAAAGAAATAAGAAACAGGCAGTAAATAAGTTGACAGAGATTGTCGATAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa                                                                                                                                                 <  2:1161809/239‑1 (MQ=255)
                                                                                             cTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACGGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa                                                                                                                                         <  2:1053611/239‑1 (MQ=255)
                                                                                               tATTTTCGTTTTGATTCACGAACTGTTAATTAAATATTCACGGTGACAAAAAATATAAAACCACATTTTTGGTGGTAGTTTGTGGCGGTAAATTTTTCCAGACAAATAAAAAAACGGGGGTGGCCATGATGGGCGAAAGAAATAAGAAACAGGAAGTAAATAAGTGGAAAGGGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                       <  2:164482/239‑1 (MQ=255)
                                                                                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                       <  1:990616/239‑1 (MQ=255)
                                                                                               tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAAAACAAAAACTGGAGTTGCCATGATGAGCGGAAGGAAAAAACAACAAGCAGTGAATAAATTGACAGAGATTGTCGCTAACTTTACCGCCATAATTTCTACCCGAATTCCTGATGACGGGGGGGAtaaaataaaa                                                                                                                                       >  1:516344/1‑239 (MQ=255)
                                                                                               tATTTACGCGTTGATTCACGATCTTCTAATCACATATGCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaaaa                                                                                                                                       <  1:903891/239‑1 (MQ=255)
                                                                                                aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTCATAACAAAAAAAAAAATAGGGGTGCCCTGATGAAGAAAAGTAAAAAAAAAAAAGCACGGAATAAAATTACAAAAAAGGTTGCCTACTTTAACCCCACAATTTTTACCCCAAATGCTGTTGAAGGGGTGGGTAAAACaaaaa                                                                                                                                      >  2:731474/1‑238 (MQ=255)
                                                                                                       cttttaTTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTAACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTaaa                                                                                                                               <  2:529893/234‑1 (MQ=255)
                                                                                                                 acgaattttAAATACAATATTCAGGGTGGAAAAAAATAAAAAACAACATTTTTAGGGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACGGGCATTGAATAAGTGGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGa                                                                                                                      <  2:618797/232‑1 (MQ=255)
                                                                                                                      tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGGGAATTTTTTCAGAAAAAAAAAAAAAATGGAGGTGGCATGATGAGCGGAAGAAATAAACAAAAAGCCGGGAAAAAAATGACAAAGAATGTTGCTAACTTTACCTCCAATGATTTTTCCCCGAAGGCTGATTATGCGGGGGTGAAAATAAAAAACCTAAAAGGTGCAGCAAcgg                                                                                                                 >  2:96564/1‑237 (MQ=255)
                                                                                                                            ttACATATTCACGGTGGCAAAAAATATAAAACCTCATTTTTATTGATAGTTGGTGGCGGTGAATTTGTCCAGACAAAAAAAAAAACTGGATTTGCAATGAGAAGCGAAATTAATAAGCAACAGGCAGGAAATAATTTGACAGAGATTGTCTCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGTATGCCGAAACGTCGTCGAt                                                                                                          <  1:165772/239‑1 (MQ=255)
                                                                                                                                  ttttCAGGGTGGAAAAAAATAAAAAACCAAATTTTTAGTGGTAGTTTGGGGCGGTGAATTTTTCCAGAAAAATAAAAAAACTGAAGTTGCAAAGATGAGCAAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                     <  1:844547/237‑1 (MQ=255)
                                                                                                                                  tatTCGGGGTGGAAAAAAATATAAAACCACATTGTTAGTGGTAGTTTGTGGGGGTAAATTTTTCCAGAAAAAAAAAAAAACTGGATTTGCCAGAATGAGAGAAAGTAATAAGCAACAGGCAGTAAATAAGTTAACAGAGATGGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                     <  2:52520/239‑1 (MQ=255)
                                                                                                                                  tatTCACGGTGGAAAAAAAAAAAAACCCACATTTTTAGTGGTATTTGGGGGCGGGAATTTTTCCCAAAAAAATAAAAAAGCGGGAGTTGCCATGAGGAGTAAAAAAAAAAAACAACAGGAATTGAATAATTTGACAGGGATTGTCCCTATTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa                                                                                                     <  2:503169/239‑1 (MQ=255)
                                                                                                                                         ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAAATTTTTCATAAAAATATAAAAAAATGAGTTGACATGATGAGCGAAAGGAATAAGAAACAAGCAGTGAAAAAGATGAGAAAGAATTTCTCTAAATTTTACCCCCTGATTTTTATCCGAATCCCCTGTGACGTGGTGGATAAACAAAAACAGCTAAAGAATACCGAAAATACGTCGATGGGGAAAAatat                                                                                              >  1:539887/1‑239 (MQ=255)
                                                                                                                                          gTGGCAAAAAATATAAAACCACATTTTTAGTGGAAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                              <  1:96564/238‑1 (MQ=255)
                                                                                                                                          gTGGAAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAAACAAAAACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                              <  1:538784/238‑1 (MQ=255)
                                                                                                                                          gTGGAAAAAAAAAAAAAACCACATTTTTAGTGGTAGTTGGAGGCGGTAAATTTTTCCAGACAAAAACAAAAACGGGAGTGGCCATGATGAGCGAAAGAAATAAGCAACAGGCAGTGAATAAGTTGCAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt                                                                                              <  2:1131230/238‑1 (MQ=255)
                                                                                                                                           tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAACTGGAGGTGCCATGATGAGCGGAAAGAATAAAAAAAAGGCAGAGAATAAGATGACAGAGATTGTCGCTAACTTTTCCGCCATGATTTCTACCCCCATGCCTGATGACGTGGTGGATAAACTAAAACAACTAAAAGATGCCGAAAAGTCGTCGCTGGGGGAAATTAttt                                                                                            >  1:52520/1‑237 (MQ=255)
                                                                                                                                           tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAAAACAAAAAATTGAGTTTCCATGATGGGGGAAAGTAATAAAAAACAGGCAGTGGATAAAGTGACAGAGATTGTTGCTAAATTTTCCCCCCTGGTTTTTACCCCAAAGCCTGGTGACCGGGTGGATTAACTAAAACAACTAAATGATGCCGGAACGTCGTCGCTGGGGGAAAtttttt                                                                                            >  1:1177000/1‑235 (MQ=255)
                                                                                                                                           tGGAAAAAAATATAAAACCACATTTTAAGTGTGAGTTTGTGGCGGTGAATTTTTCCAAAAAAATAAAAAAACGGGAGTTGCCAGGAAAAGCAAAAGAAATAAGCAACAGTCATTAAATAAGTTAACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATc                                                                                             <  2:959124/238‑1 (MQ=255)
                                                                                                                                           gggaaaaaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTGCAAGACAAATAAAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGAAACAGGAAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATc                                                                                             <  1:1101985/234‑1 (MQ=255)
                                                                                                                                                 aaaaTAAAAAACCACATTTTTAGTGGTAGTTGGGGGCGGGAAATTTTCCCAGAAAAATAAAAAAACTGGAGTTGCAAGGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTGGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa                                                                                      <  1:416227/239‑1 (MQ=255)
                                                                                                                                                   aaTATAAAACAAAATTTTTAGGGGTAGGTGGGGGGGGGGAATTTTACCAGAAAAAACAAAAACGGGAAGTGGCCAGGATGAGCAAAAGAAAAAAGCAACAGGCAGGAAATAAGTTGAAAGGAATGGTCGTAATTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                    <  2:968500/239‑1 (MQ=255)
                                                                                                                                                   aaTAAAAACCCACATTTTAAGTGGGATTTTGGGGGGGTAAATTTTACAAAAGAAATAAAAAAAAGGGAGTTGCCATAAAGAGCAAAAGTAATAAGAAACAGGCATGAAAAAATTAGACAAAGTTTGTCGCAAATTGTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg                                                                                    <  1:1051917/239‑1 (MQ=255)
                                                                                                                                                              acaTTTTAAGGGGTAGTTTGTGGCGATAATTTTTCCCAATAAATAAGAAAAACGGAAGTTGCAGAGATGAACAAAAGAAATAAGCAACAGGCAGAGAATAGGTTGACAGAAATTGTCAAAAAGTTAACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGacaa                                                                         <  1:568561/239‑1 (MQ=255)
                                                                                                                                                                  ttttAGTGGTAGTTTGTGGCGGTGAATTTTTTCAGACAAATAAAAAAAAATGAGTTGCCCTTATGAGCGGAAGGAATAAACAAAAAGCAGAGAATAAATTGACAGAGAATTTCGCCTACTTTTACGCCCTGATTTCTACCCGAAAGCCTTATGACGTGGTGGGTAAAATAAAACAACTAAAAGATGCCGAAACGACGGCGATGGGGAAAAATATTTACCAAACGATGTTTGaccacct                                                                      >  1:219713/1‑236 (MQ=255)
                                                                                                                                                                            ggttgtgggCGGTGAATTTTTCCAAAAAAATACAAAAACGGGAGTGCCGATGATGAGCAAAAGTAATAAGCAGCAGGCGGTGAATAAGTTGACAGAGATGTTCGTTAATTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                           <  1:26330/232‑1 (MQ=255)
                                                                                                                                                                            attttGTGGCGGTAAATTTTTCCAGAAAAATACAAAAACGGGAGTGGCCATGATGAGCGAAAGTAATAAGCAACGGGAAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                           <  1:220838/237‑1 (MQ=255)
                                                                                                                                                                            aGTTTGTGGCGGTAAATTTTTCAAGAAAAATACAAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCATTGAATAAGTTGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa                                                           <  1:856308/239‑1 (MQ=255)
                                                                                                                                                                             ttttGGGGCGGGAAATTTTTCCAGAAAAATACAAAAACGGGATTTGCCAGGATGGGCAAAAGTAAAAACCAACAGGAAGTGAAAAATTGGACAGAGATTGTCGTTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAt                                                          <  2:561769/238‑1 (MQ=255)
                                                                                                                                                                                         gAATTTTTCCAGACAAATACAAAAACTGAAGTGGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg                                              <  1:731474/239‑1 (MQ=255)
                                                                                                                                                                                           aTTTTTCCAGAAAAATACAAAAACTGGAGTTGCCATGATGAGAGAAAATAAAAAGAAACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCAAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCg                                              <  2:348989/237‑1 (MQ=255)
                                                                                                                                                                                              tttCCAGACAAATACAAAAACTGGATTTGCCATGATGAGCAAAAGTAATAACCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                         <  1:318781/239‑1 (MQ=255)
                                                                                                                                                                                              tttCCAGAAAAATACAAAAACGGGAGTTGCCAGGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTAATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctg                                         <  1:711860/239‑1 (MQ=255)
                                                                                                                                                                                                 acaaGAAAAAAAAAAAAACGGGAGTTGCCATGATGGGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGAAAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTcctgcc                                       <  2:516344/236‑1 (MQ=255)
                                                                                                                                                                                                      aaaaaTACAAAAACGGGAAGTCCCATGAGGAGAAAAAGAAATAAGCAACAGGCGGGAAATAAGTGGAAAGAGATTTTCGCAACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCa                                  <  2:965156/237‑1 (MQ=255)
                                                                                                                                                                                                                 aaaCTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCggg                        >  2:1038302/1‑239 (MQ=255)
                                                                                                                                                                                                                  aaCTGGAGTTCCGATGATGAGAGAAAGTAATAAGCAAAGGGCAGTAAATAAGTGGAAAGGGATTGTCTCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                       <  2:219713/239‑1 (MQ=255)
                                                                                                                                                                                                                  aaCGGGAGTTGCCTTGATGAGCGAAGGAAATAAGAAACAGGCAGTAAATAAGTTGACAGATATTGTCTCTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCgggg                       <  1:830309/239‑1 (MQ=255)
                                                                                                                                                                                                                       gAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGCCGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGACTCGTCCTGCCTGTCAGGACACCGGGGAGAtt                  >  1:701767/1‑239 (MQ=255)
                                                                                                                                                                                                                             gCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGt              >  1:612925/1‑238 (MQ=255)
                                                                                                                                                                                                                               gatgatgAGCGAAAGTAATAAGCAACGGGCAGAGAATAAGTGGACAGAGTTTGCCGCTAACTTTACCGCCATTATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGttc            <  2:781108/237‑1 (MQ=255)
                                                                                                                                                                                                                                        cGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg  >  2:572617/1‑239 (MQ=255)
                                                                                                                                                                                                                                        cGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAg  >  2:1131542/1‑239 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                            
CAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGAATTTTTCCAGACAAATACAAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAG  >  NC_000913/3206243‑3206709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: