| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3895550 = | 186 (2.440) | 7 (0.090) | 7/500 | NT | 3.9% | coding (1060/1338 nt) | adeP | adenine permease, high affinity; adenine:H+ symporter |
| ? | NC_000913 | 3896009 = | 163 (2.160) | coding (601/1338 nt) | adeP | adenine permease, high affinity; adenine:H+ symporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTTTCTCTTTCATGTTGGTCAACTTGTTTGACTCCTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3895840‑3895550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATC > NC_000913/3896009‑3896295 TTTTCTCTTTCATGTTGGTCAACTTGTTGGACGCGTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGT < 2:3104/289‑1 TTTCTCTTTCATGTTGGTCACCTTGTTTGACTCCTCCGTTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTG < 1:670291/289‑1 CGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTAC > 1:682855/1‑288 GTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCGCGAGGCCAGAATACCAATGGTGAAGAAGCCGCGGcatcccaaaaatac > 2:66333/1‑273 GTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCC > 1:17107/1‑288 TCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCA < 2:17107/289‑1 CCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAA < 2:682855/289‑1 GTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCT‑GCGTGAATGTTGCCCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCAGCGTTTTTCAGCCCCATCCTGCCAATGCACAGACCGATACCGCTGGGAATACCCA > 1:358547/1‑288 TCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAC < 1:66333/288‑1 TGCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCAT < 2:309179/289‑1 GCGCGAGGCCAGATTAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACCCGGAACATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCCACCTGCCACGGCAACCCCAT > 2:657897/1‑288 GCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACTCAGAAGTACGCTGTGAGAAGTCAGATTACCGACGCTCACTAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGACAATGAACAGACCGATACCGCTGGTAATACCCACCCGCCGACTCACCGGAATGTTGGCTATCATCCCGTAGCGAACCACGAAAATCGTAATTAACAGCAGACCTAACGCGCCCCAGAAGCTTGCGCCCATCCCCACCTCCCACGGCAAGGCCAc > 2:107754/1‑287 GCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCA < 1:205778/281‑1 GCGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCA > 2:205778/1‑281 CGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATC > 1:36919/1‑288 TTTTCTCTTTCATGTTGGTCAACTTGTTTGACTCCTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3895840‑3895550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcGCGAGGCCAGAATAGCAATGATGAAGAAGCCGAGGATACCCAGAAGTACGCTGTGAGAAGTCAGATTACCGATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATC > NC_000913/3896009‑3896295 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |