Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,875,5320AT26.8% 69.4 / 17.0 41H32L (CAT→CTT) ‡yidXputative lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (11/19);  new base T (11/0);  total (22/19)
Fisher's exact test for biased strand distribution p-value = 2.47e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACT  >  NC_000913/3875260‑3875795
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                       
ggtggtgtAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGAAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCAt                                                                                                                                                                                                                                                                        <  2:105376/270‑1 (MQ=255)
      ttcaTGTAATAAAAAATTATATTGTTGTACTAAAATTTAGATCCAAAAAAGAACAATGCATAAAAAAATTACATGCGTCGGGCAGAAAGCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCa                                                                                                                                                                                                                                                                  <  2:157269/271‑1 (MQ=255)
          ttgagtaCAAACTTATATTGTTGGACTACAATTTAGATGACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACGGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGTGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:227079/272‑1 (MQ=255)
          tGTAGTACAAACTGATTTTGTTTTTCTAAAATTTAGATCACAAAAAGAACAATGAATAAAAAAATGACATGCGGCGGGGAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGTGTTAGCTACTCGGTTAAAGGATTAATAATGAAGTTAAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCTAACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:160761/275‑1 (MQ=255)
           taaaataacaCTTATATTGTTGTACTACAATAGAGATCACAAAAAGAACAAGGCATAAAAAAATGACATGCGTCGTGCAGAAATCTTAAAAGGAATATCAGGCGCGAAACAGGAGGGAAAGAAGAGGATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCAATGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:208203/265‑1 (MQ=255)
               taCAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGtt                                                                                                                                                                                                                                                        >  1:10449/1‑275 (MQ=255)
                              ttgtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTGTTTTGCTTTAACGAAAAGGGTAGTTCAGGAAAGTATCAAt                                                                                                                                                                                                                                         >  1:94553/1‑275 (MQ=255)
                                gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTGCCATACAGCAAAGGTTAGTTCAGGAAAGTATCAATc                                                                                                                                                                                                                                        >  1:163080/1‑274 (MQ=255)
                                gtACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTTACCACAAAGGGCAGTTCAGGAAAGTATCAATCg                                                                                                                                                                                                                                       >  1:226918/1‑275 (MQ=255)
                                      cAATTTAAATAACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCATAAATCTGAAAAGGGTTATCAGGCGCTAAACAGGAGGGAAAGAAGAGGATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCa                                                                                                                                                                                                                                 <  2:38604/275‑1 (MQ=255)
                                           tAGAACACAAAAAAAACAATGCATAAAAAAATGACAGGCGTCGGGAAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGacac                                                                                                                                                                                                                            <  2:176142/275‑1 (MQ=255)
                                                cacaAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGGTTTCCCTTAACGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCa                                                                                                                                                                                                                       >  1:210281/1‑275 (MQ=255)
                                                cacaAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCCACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTACGGCTGCCGGTTTATTCCCACTGGCGTGGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCa                                                                                                                                                                                                                       <  2:233024/275‑1 (MQ=255)
                                                   aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTGTGGTTTGCTATACAGAAAAGTGTAGTTCAGGAAAGTATCAATCGCAGTCATACACCATCACTg                                                                                                                                                                                                                    >  1:123624/1‑275 (MQ=255)
                                                   aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACTAGTTCAGGAAAGTATCAATTGCAGTCAGACACCaaccatg                                                                                                                                                                                                                    >  1:212577/1‑269 (MQ=255)
                                                   aaaaaGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTCCTTTAACAAAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCATACACCATCAATg                                                                                                                                                                                                                    >  1:223337/1‑275 (MQ=255)
                                                                                           aaaTCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTCGTTTGCCTTAACGCAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTCTCGCAGGCAAAATGTAGTAATGTAACAAAAGGCTa                                                                                                                                                                            >  1:106991/1‑275 (MQ=255)
                                                                                                        gATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAACAAAAAAAGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGCGCTATCGCAGGCAAACACTAGTAATGGAACAAAAGGCCAACTTTTTCTAggg                                                                                                                                                               >  1:226534/1‑275 (MQ=255)
                                                                                                                 cgcTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCaa                                                                                                                                                                                                                                                                 >  1:62032/1‑168 (MQ=255)
                                                                                                                     aaaCAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAggg                                                                                                                                                                                                                                                             <  2:62031/168‑1 (MQ=255)
                                                                                                                      aaCAGGAAGGAAAGAAGATTATGCTTTCAACGGCTTAGCTAATCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATGTTTTAAGGCTGCCGGTTTAATCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGAt                                                                                                                                                   <  2:94552/273‑1 (MQ=255)
                                                                                                                           gaggGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCCGGCAAAAGATAGCAATGGAACAAAAGGAAAAGGCTTCGGAGGGGAATCGCTGGATTACCtac                                                                                                                                            >  1:96393/1‑273 (MQ=255)
                                                                                                                                aaaGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGTAGATCAGGAAAATATAAATCGCAGTCCGACACCATCACTGGGCTATCGCAGCAAGAAGAATGTACTGGAACAAAAAGCTATGCTTTTGTAGGGGATTCGATTGATTACCTTATCACt                                                                                                                                       >  1:85961/1‑275 (MQ=255)
                                                                                                                                    aataggttGCTTTCAACGGCTTAGCTACTTGTTTAAAGGAGTAATCAGGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCTGTTTATTCCCACTGGGGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATg                                                                                                                                   <  2:106990/268‑1 (MQ=255)
                                                                                                                                                      gCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTa                                                                                                                 <  2:10449/275‑1 (MQ=255)
                                                                                                                                                        ttAGATGCTCGTTTGAAGGATTAGTCATGCATATGAATTTTACTAGAGTTTTTAAAGCTGCCGTTTTATTACCACTGGCGACGATGCTTTCAGGCTGTATAACTGAAGCGTTGGTTTCGCAGACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCAACACTGAGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCGTATCACTGTTGGTGCCGATGGCATCGTTAAg                                                                                                               <  2:226917/275‑1 (MQ=255)
                                                                                                                                                          aGCTACTCGTTTAAAGGATTAATCATGTAGTTGACTTTTAAGGGATTTTTTAAGGCTTCCGGTTTATTCCCACTGGCGAGGATGCTTTCAGGCGGTATCTCGTATGCTCTGGTGTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGTCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGTGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGAt                                                                                                             <  2:198989/275‑1 (MQ=255)
                                                                                                                                                               cTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTTCTTGACCAAAAAAAGTAGTTCAGGAAAGTATCAATAGCAGTCAGACACAATCACTGGGCTATCGCAGGCAAAAGATAGAAATGGAAAAAAAGGCCATGTTTTTGTAGGGGACTGGCTGTATCACCTTATCACTGATTGTGCCGAGGACATCGTTAAGATGCTCa                                                                                                        >  1:112176/1‑275 (MQ=255)
                                                                                                                                                                tCGTTTAAAGGGTTTATCTGGCAGGTGAGTTTTAAGTGAGTTTTTAAGGATTCCGGTGTATTACTGCTGGAGATGAGGCTATCATGCTGTAGAAACGTTGGTCTGGTTTCCAATACCGCAAAGGGTAGTTCAGGAAAGTATCAATAGCAGTCAGACACCATCACTGGGCTATAGCAGCCAAAAGATAGTAATGGAATAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGGGCGGATGACCTCGTTAAGATTCTCaa                                                                                                       <  2:109704/275‑1 (MQ=255)
                                                                                                                                                                 cGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTAt                                                                                                                                                                                                                                             >  1:120652/1‑140 (MQ=255)
                                                                                                                                                                     tAAAGGATTAATCATGAAGTGGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAAt                                                                                                                                                                                                                                         <  2:120651/140‑1 (MQ=255)
                                                                                                                                                                                    gAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCGTCTTCTGCTTTACAGAAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGCTAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGAAGGTTCCCATGACATCGTTAAGATGCGCAATGATCCAGCACTTAACCGGc                                                                                   >  1:66456/1‑275 (MQ=255)
                                                                                                                                                                                    gAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCCCTCGTTTGCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTAACTTATCACTGATGGTGCCGATGACATCGTTAAGATTCTCAATGATCCAGCCCTTAATCGGc                                                                                   >  1:123312/1‑275 (MQ=255)
                                                                                                                                                                                                          ttttAGGGTGCCGGTTTATTCCCACTGGCTCTGATGCTTTCCGGCGGTATCTCGTATGCTTTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATAGAAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGATATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGAAATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGa                                                             <  2:223336/275‑1 (MQ=255)
                                                                                                                                                                                                                                                ttCAGGCTGTATCTCGTATGCCGTCGTTTGCTATACCACAAAAGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGCTGCTCAATGATCAAGCACTTAACCGGCAAAATATTCCGGTTGCCGATGACGCAAGACTTGTTTTAATTGCGGGGAAAAAGAAAttt                        >  1:139846/1‑274 (MQ=255)
                                                                                                                                                                                                                                                              tcGTATGCCCTGGTTTCCCATACCGCAACGGGCAGTTAAGGAAAGAATCAATCGCATGTAGACACCATACAAGTGCTAACGAAGCCAAAAGATAGTAATGGAAAAAAAGGCTATGTTGTTGTGGGGGAATCGCTGAATTACATTATCACTGATGGTGCCTAGGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGTCAATATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAATAAGAAATTTACCGGCACAatat           <  2:210280/274‑1 (MQ=255)
                                                                                                                                                                                                                                                                gTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGc        >  2:219268/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                gTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATAGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAACTGCGGGGAAAAAGAAATTTACCGGAACCATATcct        >  2:206891/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                      tctGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAAGCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCCCAATATCTCTTtaca  >  2:95050/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                        tGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCg                                                                                                                             >  2:118832/1‑150 (MQ=255)
                                                                                                                                                                                                                                                                            ttCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGa                                                                                                                         <  1:118833/150‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                       
GTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACAGGAGGGAAAGAAGAGTATGCTTTCAACGGCTTAGCTACTCGTTTAAAGGATTAATCATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACT  >  NC_000913/3875260‑3875795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: