New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 106684292 (0.930)3 (0.030) 3/490 NT 3.2% intergenic (+16/+22) agp/yccJ glucose‑1‑phosphatase/inositol phosphatase/uncharacterized protein
?NC_000913 = 1066847 94 (0.990)intergenic (+21/+17) agp/yccJ glucose‑1‑phosphatase/inositol phosphatase/uncharacterized protein
Rejected: Frequency below/above cutoff threshold.

GCGCTGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1066545‑1066842
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcccccgcTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATCGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGTTCTGGTCATGCAACTGATACG  <  NC_000913/1066847‑1066561
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
GCGCTGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAA                                                                                                                                                                                                                                                                                                          >  2:136783/1‑289
    TGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCC                                                                                                                                                                                                                                                                                                      <  2:893749/289‑1
    TGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTC                                                                                                                                                                                                                                                                                                       >  1:793261/1‑288
    TGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTC                                                                                                                                                                                                                                                                                                       >  2:869230/1‑288
     GGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCC                                                                                                                                                                                                                                                                                                      <  2:246446/288‑1
                  TATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGCTGCCCGATAGACGCGGCTGGTCCCCGCCCCTTGAAAAAGTTTGATAGCTTGTTGCATGACGCGGTACAATCACACAAAACTCCACCGtcagcagcgg                                                                                                                                                                                                                                                                                        >  2:889717/1‑279
                                                                                                                                                                                                    TGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAACTAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCCTTCTGATAACCAAATTCA                                                                                                      >  1:889717/1‑289
                                                                                                                                                                                                                                                             ATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAAC                                                                                                                                                                                                  >  1:755721/1‑140
                                                                                                                                                                                                                                                             ATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAAC                                                                                                                                                                                                  <  2:755721/140‑1
                                                                                                                                                                                                                                                                                                    CCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATCGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGTTCTGGTCATGC            <  1:183771/283‑1
                                                                                                                                                                                                                                                                                                    CCCCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATCGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGTTCTGGTCATGC            >  2:183771/1‑283
                                                                                                                                                                                                                                                                                                      CCGCTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATCGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGTTCTGGTCATGCAACTGATA    <  2:628968/289‑1
                                                                                                                                                                                                                                                                                                        GCTTCTCTCGGGGGGGTTTTCTGTTATTTAACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTTTATCGGGCAACCGCTTCATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATCGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGTTCTGGTCATGCAACTGATACG  <  2:897588/289‑1
                                                                                                                                                                                                                                                                                                         CTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAAACATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCAATGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATAGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGat                      >  1:152718/1‑266
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
GCGCTGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAACAGAAAACTCCCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1066545‑1066842
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcccccgcTTCTCGCGGGGGAGTTTTCTGTTATTTCACCGCTTCATTCAACACGCTATCAAACTTATCCATCGGGCAGAAACCATCAGCGTCTATCGGGCAACCGCTTAATTCCAGCGTCACACGCTGCGCAGGTGCCTGCAGGGTTAACGCATCGGCATTACGTAACTGTTCCGCACTCTGATACACATATTCAATTTTCATCAAATCGCGATTGGCTTTGCTGTCATGCCAACGCTGGAAAACGATTTTGCCGCCAATCGGCGTGCGTTCGTTCTGGTCATGCAACTGATACG  <  NC_000913/1066847‑1066561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.