New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | = 3942724 | 46 (1.110) | 4 (0.100) | 4/384 | 4.2 | 9.7% | coding (606/1521 nt) | yifB | bifunctional magnesium chelatase family protein and putative transcriptional regulator |
? | CP009273 | = 3942954 | 30 (0.740) | coding (376/1521 nt) | yifB | bifunctional magnesium chelatase family protein and putative transcriptional regulator | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TGTGATGAGGTGAGCGGAACGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTCGCGACGATAATTTTTCTGCCCGAC > CP009273/3942516‑3942937 | tgtgATGAGGTGAGCGGAACGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGa < 1:369231/234‑1 (MQ=255) tgtgATGAGGTGAGCGGAACGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACa > 1:156369/1‑239 (MQ=255) gTGAGCGGAACGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCCATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTACTTTCCAGTCCTCGCTTTCCTTGTTcc > 2:26346/1‑218 (MQ=255) aGCGGAACGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTCCCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTCGTTcc > 1:194416/1‑215 (MQ=255) aaCGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTCCCTGTCCGATAACATCACTgag > 2:45020/1‑230 (MQ=255) gggCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTAGCTTTCCTTGTTc > 2:320022/1‑206 (MQ=255) gggCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCCGCCCAATCAGTAACAGGTTGTGCCCGCCAGCAGCCGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGAt > 2:458282/1‑215 (MQ=255) ctcTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGa < 1:195491/209‑1 (MQ=255) aTTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCAtgttg < 1:468682/223‑1 (MQ=255) tGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGAcc < 2:16704/186‑1 (MQ=255) gATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGttt > 1:307542/1‑239 (MQ=255) ttCAGCATTTGCGAGACTGAATATCGCAGCACTCGCCAGTGCCTCTGCATTGCTTAAGTCTGTCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAAGCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGGTTTCCTTGTTCCTGACCGATAACATCACTgaga < 2:91427/199‑1 (MQ=255) ttCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCAtgttg < 2:367119/207‑1 (MQ=255) tACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCgag < 1:14013/240‑1 (MQ=255) cAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGGTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCAGGATACTGCATCAGTTGGTTTCGGGCGTTCgaga < 1:478981/238‑1 (MQ=255) aCTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGACCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCgg > 1:479341/1‑225 (MQ=255) ttAATATCGCTGCTCTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAgc < 2:373453/194‑1 (MQ=255) cagcaCTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTAcc > 2:84137/1‑235 (MQ=255) cagcaCTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTAACTTcc > 1:58582/1‑239 (MQ=255) agcaCTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGt > 1:374973/1‑227 (MQ=255) caCTCTCCAGTGCCTCTTCATTGCTTAAATCTGGGAACAGGCCATTAATACGGCTGGCGAGCATTGTCTTACCTGTTCCCGGCTGCCCAATCAGTTAAACGTGGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTCACCGGTAACATCACt > 2:453028/1‑166 (MQ=255) ctctCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAAc > 1:72955/1‑240 (MQ=255) tcCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCgag > 2:169063/1‑215 (MQ=255) tcCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCg > 2:369987/1‑219 (MQ=255) tcCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGca > 1:299872/1‑240 (MQ=255) ccAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTCATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCAc < 1:224400/159‑1 (MQ=255) ccAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCAc > 2:224400/1‑159 (MQ=255) ctTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGagag > 1:278064/1‑207 (MQ=255) ctTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGagag < 2:278064/207‑1 (MQ=255) ctTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGcac > 1:307909/1‑231 (MQ=255) ctTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCCGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTACTTGTTCCTGACCGATACCAtac > 1:16178/1‑147 (MQ=255) ctTCATTGCTTAAATCGGGCAACAGGCCATTAAGACGGCTGGCGAGCATTGTTTTTCCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAgc < 2:448491/167‑1 (MQ=255) ttAATACGGCTGGCGAGCATTGTTTTACCTGTGCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCacaga < 2:89417/205‑1 (MQ=255) gCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTaa > 1:99911/1‑239 (MQ=255) cATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCAc > 1:225222/1‑240 (MQ=255) tggtgttACCTGTGCCCGGCGGCCCAACCAGTAAACGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAGCATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGa < 2:352416/171‑1 (MQ=255) ttACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGACACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGtt > 1:261179/1‑221 (MQ=255) gTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGt < 2:389028/151‑1 (MQ=255) cggcCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTcg > 2:381645/1‑239 (MQ=255) cccAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACAGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTGCCAGAAACGCACAGACAGCTTGCAgatgat < 1:383950/179‑1 (MQ=255) gTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTCGCGACGATAATTTTTCTGcc > 1:87010/1‑240 (MQ=255) gtgCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTCGCGACGATAATTTTTCTGCCCGa < 1:273713/240‑1 (MQ=255) tgCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTCGCGACGATAATTTTTCTGCCCGAc > 1:479656/1‑240 (MQ=255) tgCCCGCCAGCAGCGGTAATTACCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTCGCGACGATAATTTTTCTGCCCGAc > 1:478352/1‑240 (MQ=255) ccaccaGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTGGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCg < 2:434418/177‑1 (MQ=255) cagcagCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGAGCCCGGGATCCTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCtt < 1:467361/171‑1 (MQ=255) | TGTGATGAGGTGAGCGGAACGGGCGCTGCCGCCATTGTTTTTGTACTGATTCAGCATTTACCAGACTTAATATCGCAGCACTCTCCAGTGCCTCTTCATTGCTTAAATCTGGCAACAGGCCATTAATACGGCTGGCGAGCATTGTTTTACCTGTTCCCGGCGGCCCAATCAGTAAAAGGTTGTGCCCGCCAGCAGCGGTAATTTCCAGTCCTCGCTTTCCTTGTTCCTGACCGATAACATCACTGAGATCATGTTGTAGCGCCCGGGATACTGCATCAGTTGGTTTCGGGCGTTCGAGAGCGTGCTTACCTTCCAGAAACGCACAGACAGCTTGCAGATGATCGGCTATCAGGCATCCTTCACCGTTAATTAGCCCCACTTCATCTTCGTTATCTTTCGCGACGATAATTTTTCTGCCCGAC > CP009273/3942516‑3942937 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |