New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP025533 2728535 =110 (0.700)29 (0.190) 29/496 13.4 20.9% coding (277/297 nt) CYL77_12960 hypothetical protein
?CP025533 = 3041097 NA (NA)intergenic (+7/‑308) CYL77_14395/CYL77_14400 IS30 family transposase ISCg2/YibE/F family protein
Rejected: Coverage evenness skew score above cutoff.

AATACCGCAAATGGGGGTAGCGGGTGTGTTGAGGGGTGGCTGACCGGACAGGGATTTGAGTTTTTCTCTAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP025533/2728778‑2728535
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACACCGGACACT  <  CP025533/3041097‑3040858
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
AATACCGCAAATGGGGGTAGCGGGTGTGTTGAGGGGTGGCTGACCGGACAGGGATTTGAGTTTTTCTCTAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGA                                                                                                                                                                                                                                             >  1:1344548/1‑249
            GGGGGTAGCGGGTGTGTTGGGGGTGGGCTGACGGGACAGGGTTTTGAGTTTTTCTCTAAAACCGGCGGGAATTGGGGGTTAACTACCTCTTCGGGGGTGGTGGGGGGGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTG                                                                                                                                                                                                                                 <  2:1246158/249‑1
                ggaggGGGTGTGTGGGGGGTTGGTTGACCGAACGGGAATTTGAGTTTTTCTTAAAACCGGGCGTGACCTGGGGTTTAACTACCTTTTGGGGGGTGGTGGGGGGGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATG                                                                                                                                                                                                                             <  1:672835/244‑1
                  AGCGGGTGTGTTGAGGGGTGGCTGACCGGACAGGGATTTGAGTTTTTCTCTAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTCGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCA                                                                                                                                                                                                                           >  2:1215925/1‑249
                               AGGGGTGGCTGACCGGACAGGGATATGAGTTTTTCTCTAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGACGAATTCAATCGGTAGATGCACCAACTACGATTT                                                                                                                                                                                                              >  2:510451/1‑249
                                  GGTGGCTGACCGGACAGGGATTTGAGTTTTTCTCTAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGG‑‑‑‑‑‑‑GGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATAC                                                                                                                                                                                                    >  1:2089/1‑249
                                                         gagtttgtcctgAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGGGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTA                                                                                                                                                                                    <  2:1336507/237‑1
                                                                TCTCAAAACCCGGCGTGAACTGGGGGTTAACTACCTCTTGGGGGTGGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCAT                                                                                                                                                                             <  1:1476418/249‑1
                                                                  nCTAAAACGGGCTGAAACTGGGGTTTAACTCCCTCTTCGGGGGTGGTTGGGGGGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGC                                                                                                                                                                           <  1:619006/248‑1
                                                                     AAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATT                                                                                                                                                                        >  1:166707/1‑249
                                                                          CGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCG                                                                                                                                                                   >  1:528145/1‑249
                                                                            GGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGC                                                                                                                                                                  >  2:1310487/1‑249
                                                                              CGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCGAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGG                                                                                                                                                                >  1:782669/1‑249
                                                                                               CTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGAT                                                                                                                                               <  2:448673/249‑1
                                                                                                                           GGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACT                                                                                                                   <  2:483643/249‑1
                                                                                                                               GTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACT                                                                                                               >  1:185045/1‑249
                                                                                                                                             GTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGT                                                                                                 <  2:777233/249‑1
                                                                                                                                                           TAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAA                                                                                   <  1:1215925/249‑1
                                                                                                                                                           TAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAA                                                                                   >  2:963999/1‑249
                                                                                                                                                                ACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCC                                                                              >  1:88723/1‑249
                                                                                                                                                                             AAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCAT                                                                 >  1:23006/1‑249
                                                                                                                                                                                        ACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCA                                                      >  2:165244/1‑249
                                                                                                                                                                                            CCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCG                                                  <  2:297721/249‑1
                                                                                                                                                                                                    ACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGC                                          >  1:1244974/1‑249
                                                                                                                                                                                                                  CGCCTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATG                            >  2:501811/1‑249
                                                                                                                                                                                                                     CTCGACTATGTTCACCCCCAAAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGG                         <  2:774134/249‑1
                                                                                                                                                                                                                                      CCAAAGGGGAAGTACGGCGAATTCAAGCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACACCG        <  2:57359/249‑1
                                                                                                                                                                                                                                         AAGGGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACACCGGAC     >  2:222978/1‑249
                                                                                                                                                                                                                                            GGGAAGTACGGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACACCGGACACT  >  1:474077/1‑249
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
AATACCGCAAATGGGGGTAGCGGGTGTGTTGAGGGGTGGCTGACCGGACAGGGATTTGAGTTTTTCTCTAAAACCGGCGTGAACTGGGGGTTAACTACCTCTTCGGGGGTGGTTGGGGTGGCGGGGGTGGCCCTTGAGGGGTGGGGAACTTATTTAAATACCCCCGAAAAACAAGGCAAATGGACACCCGTGCCAACATATTGGCGATCCGCCTCGACTATGTTCACCCCCAAAGGGGAAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP025533/2728778‑2728535
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGAATTCAATCGGTGGATGCACCAACTACGATTTTTTCATATACCTGCGTCGCGCTTTTAAAACCATGCATTTTCCGCGGCCGGTAATTCAGCAGATCCTGTGCCCGCTGAACTTCTTCGTCACTTACTTTAGCAAAATTAGTGCCCTTCGGGAAAAAATCCCTGACCAATCCATTCGTATTCTCATTCGACCCACGCTGCCACGGCGAATGAGGATCACAGAAAAACACCGGACACT  <  CP025533/3041097‑3040858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.