| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP025533 | 612717 = | 2 (0.010) | 136 (0.870) | 114/496 | 0.3 | 98.6% | coding (327/1617 nt) | groL | molecular chaperone GroEL |
| ? | CP025533 | 2110023 = | NA (NA) | intergenic (+2/+13) | CYL77_10050/CYL77_10055 | ABC transporter ATP‑binding protein/ISL3 family transposase | |||||
CTGGTTTAACGGCTCTTCCTGTTTTAGAGTGCATTGATCTTATGGACCAACTGCCCTGAATGGATAAGGCACCGCAGAATGTAGTGGTTCAAATTACGGAAACCTAGAGCAATCCCACGCAAATGCTCCAACCGTCCGTTGATCGCTTCGACCGGACCGTTGGAGACACCAACATCGAAATACGCCAACACATCACCAAGTCGTTTAAACAAACTACGACCCAACTGCGCGAGTTCCTTATTCGGCCCC > CP025533/2110013‑2110261 | aggcttaaccGGCTCTTCCTGTTTTAGAGTGCATTGATCTTATGGACCAACTGCCCTGAATGGATAAGGCACCGCAGAATGTAGTGGTTCAAATTACGGAAACCTAGAGCAATCCCACGCAAATGCTCCAACCGTCCGTTGATCGCTTCGACCGGACCGTTGGAGACACCAACATCGAAATACGCCAACACATCACCAAGTCGTTTAAACAAACTACGACCCAACTGCGCGAGTTCCTTATTCGGcccc < 2:717229/240‑1 (MQ=1) | CTGGTTTAACGGCTCTTCCTGTTTTAGAGTGCATTGATCTTATGGACCAACTGCCCTGAATGGATAAGGCACCGCAGAATGTAGTGGTTCAAATTACGGAAACCTAGAGCAATCCCACGCAAATGCTCCAACCGTCCGTTGATCGCTTCGACCGGACCGTTGGAGACACCAACATCGAAATACGCCAACACATCACCAAGTCGTTTAAACAAACTACGACCCAACTGCGCGAGTTCCTTATTCGGCCCC > CP025533/2110013‑2110261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |