| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 12933 = | 28 (0.930) | 5 (0.200) | 5/170 | 1.7 | 16.6% | coding (1045/2439 nt) | h16_B0012 | EPS I polysaccharide export protein, putative tyrosine‑protein kinase |
| ? | AM260480 | 12951 = | 27 (1.090) | coding (1063/2439 nt) | h16_B0012 | EPS I polysaccharide export protein, putative tyrosine‑protein kinase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGAGGCCGACAGGGTCTGCATACGCGCGTCGATCTCCGCGCGCTCGCGAGTCATCTGCTGGATCTGGCTGTCGACGGTGCGGACCTCGTTGGCCTCGGGCGTGAAGCGCTGGAGCAGCCGCGTGCGCTCAAGCTTGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/13073‑12933‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctcaagcttgagcgcACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCCAGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACGCGCGTATGCAGACCCTGTCGGCCTCCGAGCGCGAAT > AM260480/12951‑13083 GGAGGCCGACAGGGTCTGCATACGCGCGTCGATCTCCGCGCGCTCGCGAGTCATCTGCTGGATCTGGCTGTCGACGGTGCGGACCTCGTTGGCCTCGGGCGTGAAGCGCTGGAGCAGCCGCGTGCGCTCAAGCT < 1:365194/134‑1 CGTCGATCTCCGCGCGCTCGCGAGTCATCTGCTGGATCTGGCTGTCGACGGTGCGGACCTCGTTGGCCTCGGGCGTGAAGCGCTGGAGCAGCCGCGTGCGCTCAAGCTTGAGCGCACGCG < 1:677368/120‑1 GATCTCCGCGCGCTCGCGAGTCATCTGCTGGATCTGGCTGTCGACGGTGCGGACCTCGTTGGCCTCGGGCGCGAAGCGCTGGAGCAGCCGCGTGCGCTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGCTTCA < 1:44009/133‑1 GTCGACGGTGCGGACCTCGTTGGCCTCGGGCGTGAAGCGCTGGAGCAGCCGCGTGCGCTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGC < 2:454802/90‑1 GCGCTGGAGCAGCCGCGTGCGCTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGAC < 1:454802/90‑1 CGCGTGCGCTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCCAGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACG < 2:677368/120‑1 CTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCCAGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACGCGCGTATGCAGACCCTGTCGGC < 1:280357/134‑1 CTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCCAGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACGCGCGTATGCAGACCCTGTCGGC < 2:240179/134‑1 TGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGAC < 1:885074/61‑1 TGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGAC > 2:885074/1‑61 CACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCCAGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACGCGCGTATGCAGACCCTGTCGGCCTCCGAGCGCGAAT > 1:21494/1‑134 GGAGGCCGACAGGGTCTGCATACGCGCGTCGATCTCCGCGCGCTCGCGAGTCATCTGCTGGATCTGGCTGTCGACGGTGCGGACCTCGTTGGCCTCGGGCGTGAAGCGCTGGAGCAGCCGCGTGCGCTCAAGCTTGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/13073‑12933‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctcaagcttgagcgcACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCCAGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACGCGCGTATGCAGACCCTGTCGGCCTCCGAGCGCGAAT > AM260480/12951‑13083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |