| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 2342012 = | 41 (1.360) | 5 (0.200) | 5/174 | 1.7 | 12.7% | coding (1579/1596 nt) | h16_B2083 | MFS transporter, DHA2 family |
| ? | AM260480 | 2342028 = | 34 (1.340) | coding (1563/1596 nt) | h16_B2083 | MFS transporter, DHA2 family | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGTGGCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCCGGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/2342086‑2342012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgccggcgcccgGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCCACCGCAGCCACCACCAGGCCGAGGTGGATGGCGCTGACCAGCGATACGCGCGCCTGTTCCAGCAGC > AM260480/2342028‑2342148 CGGTGGCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCCGGCGCCCGGGTCAGCT < 1:617767/83‑1CGGTGGCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCCGGCGCCCGGGTCAGCT > 2:617767/1‑83 GGCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCC < 1:108077/63‑1 GGCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCC < 2:784584/63‑1 GCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCCGGCGCCCGGGTCAGCTTGATCGACGGTACCCGGC < 1:1073943/96‑1 GCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCCGGCGCCCGGGTCAGCTTGATCGACGGTACCCGGC > 2:1073943/1‑96 CTGACCCGGGCGCCGGCGCCCGGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCCACCGCAGCCACCACCAGGCCGAGGTGGATGGCGCTGACCAGCGATACGCGCGCCTGT > 1:761129/1‑134 CGGGCGCCGGCGCCCGGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCCACCGCAGCCACCACCAGGCCGAGGTGGATGGCGCTGACCAGCGATACGCGCGCCTGTTCCAGC < 2:761129/134‑1 GGCGCCCGGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCC < 1:784584/63‑1 GGCGCCCGGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCC < 2:108077/63‑1 CCGGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCCACCGCAGCCACCACCAGGCCGAGGTGGATGGCGCTGACCAGCGATACGCGCGCCTGTTCCAGCAGC > 1:284868/1‑124 CCGGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCCACCGCAGCCACCACCAGGCCGAGGTGGATGGCGCTGACCAGCGATACGCGCGCCTGTTCCAGCAGC < 2:284868/124‑1 CGGTGGCTGCCGCGCTGGGTGTGTGGTGCGCCCGCCGGGTACCGTCGATCAAGCTGACCCGGGCGCCGGCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/2342086‑2342012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcgccggcgcccgGGTCAGCTTGATCGACGGTACCCGGCGGGCGCACCACACACCCAGCGCGGCAGCCACCGCAGCCACCACCAGGCCGAGGTGGATGGCGCTGACCAGCGATACGCGCGCCTGTTCCAGCAGC > AM260480/2342028‑2342148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |