| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 3286268 | 14 (0.530) | 8 (0.330) | 6/190 | 1.4 | 39.2% | coding (1174/1593 nt) | nadB | L‑Aspartate oxidase |
| ? | AM260479 | = 3286269 | 12 (0.500) | coding (1175/1593 nt) | nadB | L‑Aspartate oxidase | |||||
GGCGTGGTCACCGACACCTCCGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/3286133‑3286268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccgcgGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGCGGTTTCGCCCACGGCGTACAGATTGCCGATATCGGTGCGTCCG < AM260479/3286269‑3286153 GGCGTGGTCACCGACACCTCCGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCG > 2:1097293/1‑134GGCGTGGTCACCGACACCTCCGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCG > 1:665202/1‑134 GCGTGGTCACCGACACCTCCGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGC < 2:665202/134‑1 CGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGC < 2:729416/115‑1 CGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGC > 1:729416/1‑115 CGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGC < 1:340083/79‑1 CGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGC > 2:340083/1‑79 CCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGAT < 2:366492/67‑1 CCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGAT > 1:366492/1‑67 TCGAATGCATGGTGATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTT > 1:895417/1‑74 TCGAATGCATGGTGATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTT < 2:895417/74‑1 GATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGCGGTTTCGCCCACGGCGTACAGATTGCCGATATCGGTGCGTCCG < 2:1132054/128‑1 GATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGCGGTTTCGCCCACGGCGTACAGATTGCCGATATCGGTGCGTCCG > 1:1132054/1‑128 GATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGCGGTTTCGCCCACGGCGTACAGA < 1:493097/107‑1 GATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGCGGTTTCGCCCACGGCGTACAGA > 2:493097/1‑107 GATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGC < 1:712134/56‑1 GATCGGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGC > 2:712134/1‑56 GGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGG > 1:543899/1‑47 GGCCGCGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGG < 2:543899/47‑1 CGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGAGGTTTCG < 1:933301/83‑1 CGGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGAGGTTTCG > 2:933301/1‑83 GGCGTGGTCACCGACACCTCCGGACGCACCGATATCGGCAATCTGTACGCCGTGGGCGAAACCGCCTGCACCGGCCTGCATGGTGCCAACCGGCTGGCCTCCAACTCGCTGCTCGAATGCATGGTGATCGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/3286133‑3286268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccgcgGCGCGGCCGATCACCATGCATTCGAGCAGCGAGTTGGAGGCCAGCCGGTTGGCACCATGCAGGCCGGTGCAGGCGGTTTCGCCCACGGCGTACAGATTGCCGATATCGGTGCGTCCG < AM260479/3286269‑3286153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |